ISAac2

  • Family IS5
  • Group IS427
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
AB009310 ND Actinobacillus actinomycetemcomitans
Actinobacillus actinomycetemcomitans
DNA section
IS Length : 885 bp

Ends


IR Length : 16/17

IRL : GGGCGTGTTGATCTTTCCGGTATAAAAAATAAACGACATAGAAGTTTGGT
IRR : GGGCTGTTGATCTTTCGAGTACAAATATCAACCAAATATCAACCTAGCCC

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

GGGCGTGTTGATCTTTCCGGTATAAAAAATAAACGACATAGAAGTTTGGTATAATTGAGTCCGCAAAAACCTGAATAAACCTTACAAACTATGTCGTTGA
GAACTATTTTAACAGATAAGCTGTGGGATCGCCTGGCTTATTTACTTGACCGAACAGGTCGTGTTTACAATAAACCCGAACATCGCAATACCGTCGAAGG
TATTCTGTACCGTCTTCGCACAGGATGTCCTTGGCGTGATTTACCTGCAGAATTTGGTTTGTGGAACACCGTTTATCGCCGTTTCAATCTATGGTCAAAG
AAAGGTATTTGGCAAGAAGTGCTAAAGTTCTTTCGGCAGTGTATTGATTCTGAATGGATTTTTATTGATGGCAGCATCGTCAAAGCACATCAACACGCAA
TGGGGGCTAGCGGTCAAAATCCGCAAGCTATTGGCAAAAGCGTAGCGGGCAATACGACGAAAATCCATTTGGCAGTGGATAGTTGTGGTAATCCTATCGA
CTTTATTTTAACGGGAGGCGAAGTTCACGACAGCAAAGCCGCACCTGATTTAGTGGCATTATTGCCTGATAGTGAAGCGATTATTGCAGACCGCGGATAC
GACTGCCAAGCCTTGCGAGAGCTGATTTTAACCGATAAAAAAGCGATTCCCGTACTACCGAGAAAGCGAAATTCAAAGGTAGGAAATGATGATGTGGATT
GGTGCCTTTACCGCTATCGACATTTAGTTGAAAATGCTTTTGCACTCTTAAAACAATATCGAGCCATTGCGACTCGATACGATAAATTGGCAAGGAATTA
TGCTTCCTCCTTGGCATTTACTTGCTGTATTCGTTGGGCTAGGTTGATATTTGGTTGATATTTGTACTCGAAAGATCAACAGCCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
768 bp255 aa90857+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSLRTILTDKLWDRLAYLLDRTGRVYNKPEHRNTVEGILYRLRTGCPWRDLPAEFGLWNTVYRRFNLWSKKGIWQEVLKFFRQCIDSEWIFIDGSIVKAH
QHAMGASGQNPQAIGKSVAGNTTKIHLAVDSCGNPIDFILTGGEVHDSKAAPDLVALLPDSEAIIADRGYDCQALRELILTDKKAIPVLPRKRNSKVGND
DVDWCLYRYRHLVENAFALLKQYRAIATRYDKLARNYASSLAFTCCIRWARLIFG

 

Blast result :
Comments
71% aa homologous with IS1301 of Neisseria meningitidis.
References
1] He,T.Direct submission Genbank.