ISEc70
- Family IS1595
- Group IS1595
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP015139 | ND | Escherichia coli | Escherichia coli Ecol_732 pEC732_IMP14 |
DNA section
IS Length : 1018 bp
Ends
IR Length : 20/24
IRL : cctgattaccaccatgcttcagcccctcaggactatacttaaagtatcct
IRR : cctgaTTACCATCGAGATTCAGCCAGTTTTAGCAATCGCTGTGGCATAGG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TGATTTAAATCA | ATCCCTTT | AGGTAAATATTG | 8 |
DNA sequence
CCTGATTACCACCATGCTTCAGCCCCTCAGGACTATACTTAAAGTATCCTGTTCTGGAGGGTTTAATCATGGCCAAGAACAAGGTTCAGTTTCAAAAAAG
CATGAATATTCATGCCTTTATTCAGAGTTATGGCAGTGAAGAGCGGTGTCAGCAACGGCTGTTTGATATTCGTTGGCCTCAAGGCTTCCTATGTCCAAAC
TGCGGACATACCCACTATTGCAGGCTTCACTCGAGATCGGTTTACCAATGTAATCAGTGTCACCAACAAACCTCGCTGACTGCTGGAACCATTTTTGCCT
ACTCCAAATTGCCTCTCACCATCTGGTTTTTGGCCATCTATCTGATCACTCAAGAGAAAAATGGTGTTTCCGCTCTGGAGTTATCACGTTCGCTTGGCAT
CTCTTACAACGCGACCTGGCGACTTAAGCACAAGTTGATGCAAGCCATGAAAGAGCGTGATGATGAGGTTAAGCTATCAGGCATCATCCAGCTTGATGAT
GCTTATTGGGGCGGAGCTAGAACTGGAAAGGTAGGTCGTGGAGCGGCAGGCAAACGCCCATTTGTTGCAGCCGTATCCCTCACCGAGGAAGGACACCCGA
ACTGCATGCGATTCAGTGCGGTCAATGGCTTCAAGAAAACGGAACTAACTCAATGGGCGAAGAAGCATCTGCAGCCATCATCCTTGGTTGTCTCGGATGG
TTTGGCCTGTTTCCGAGGCATTGAAGAGGCCAATAGTTTTCATCTTGGGATCGTGACAGGAGGAGGGCCTGAAAGTGTCAAACTGCCCTACTTCAAGTGG
GTCAATACCATGATAAGTAACGTAAAGAATTCCATTCATGGAACCTATCACGCGATAAATCAGAAGCATCTGCCACGGTATTTGGCTGAGTTCAGCTTTA
AGTTCAATCACCGATTCAATCTGGAGTGGATGGTAACTGATTTAGCCAGAGCAGGAATTCGAACGGCACCTATGCCACAGCGATTGCTAAAACTGGCTGA
ATCTCGATGGTAATCAGG
CATGAATATTCATGCCTTTATTCAGAGTTATGGCAGTGAAGAGCGGTGTCAGCAACGGCTGTTTGATATTCGTTGGCCTCAAGGCTTCCTATGTCCAAAC
TGCGGACATACCCACTATTGCAGGCTTCACTCGAGATCGGTTTACCAATGTAATCAGTGTCACCAACAAACCTCGCTGACTGCTGGAACCATTTTTGCCT
ACTCCAAATTGCCTCTCACCATCTGGTTTTTGGCCATCTATCTGATCACTCAAGAGAAAAATGGTGTTTCCGCTCTGGAGTTATCACGTTCGCTTGGCAT
CTCTTACAACGCGACCTGGCGACTTAAGCACAAGTTGATGCAAGCCATGAAAGAGCGTGATGATGAGGTTAAGCTATCAGGCATCATCCAGCTTGATGAT
GCTTATTGGGGCGGAGCTAGAACTGGAAAGGTAGGTCGTGGAGCGGCAGGCAAACGCCCATTTGTTGCAGCCGTATCCCTCACCGAGGAAGGACACCCGA
ACTGCATGCGATTCAGTGCGGTCAATGGCTTCAAGAAAACGGAACTAACTCAATGGGCGAAGAAGCATCTGCAGCCATCATCCTTGGTTGTCTCGGATGG
TTTGGCCTGTTTCCGAGGCATTGAAGAGGCCAATAGTTTTCATCTTGGGATCGTGACAGGAGGAGGGCCTGAAAGTGTCAAACTGCCCTACTTCAAGTGG
GTCAATACCATGATAAGTAACGTAAAGAATTCCATTCATGGAACCTATCACGCGATAAATCAGAAGCATCTGCCACGGTATTTGGCTGAGTTCAGCTTTA
AGTTCAATCACCGATTCAATCTGGAGTGGATGGTAACTGATTTAGCCAGAGCAGGAATTCGAACGGCACCTATGCCACAGCGATTGCTAAAACTGGCTGA
ATCTCGATGGTAATCAGG
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 945 bp | 314 aa | 69 | 1013 | + | No |
Chemistry : DDE
ORF sequence :
MAKNKVQFQKSMNIHAFIQSYGSEERCQQRLFDIRWPQGFLCPNCGHTHYCRLHSRSVYQCNQCHQQTSLTAGTIFAYSKLPLTIWFLAIYLITQEKNGV
SALELSRSLGISYNATWRLKHKLMQAMKERDDEVKLSGIIQLDDAYWGGARTGKVGRGAAGKRPFVAAVSLTEEGHPNCMRFSAVNGFKKTELTQWAKKH
LQPSSLVVSDGLACFRGIEEANSFHLGIVTGGGPESVKLPYFKWVNTMISNVKNSIHGTYHAINQKHLPRYLAEFSFKFNHRFNLEWMVTDLARAGIRTA
PMPQRLLKLAESRW
SALELSRSLGISYNATWRLKHKLMQAMKERDDEVKLSGIIQLDDAYWGGARTGKVGRGAAGKRPFVAAVSLTEEGHPNCMRFSAVNGFKKTELTQWAKKH
LQPSSLVVSDGLACFRGIEEANSFHLGIVTGGGPESVKLPYFKWVNTMISNVKNSIHGTYHAINQKHLPRYLAEFSFKFNHRFNLEWMVTDLARAGIRTA
PMPQRLLKLAESRW
Blast result :
Comments
ISEc70 is 75% aa similar to ISPma1.
References