ISEc66
- Family IS110
- Group IS1111
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Escherichia coli | Escherichia coli |
DNA section
IS Length : 1441 bp
Ends
IR Length : 13
IRL : aaATGTAATGAACACATCCCACCCCATTAAGTAAGGTGCACAGTGATAGA
IRR : tTATATGAACACATCCCGTTTGCAAGGCATCCATTGTTATGACATTGACG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
AAATGTAATGAACACATCCCACCCCATTAAGTAAGGTGCACAGTGATAGATGAAGGGAAATACAGGAAGGTGTGGAGCCTCGCAGATTTCCGGCATCATA
GTGCCCAATACGGGATACAAAAAGTTCCCTCAGACTGGAGACTCCACAAATGAAATATACACCGGTTGGCGTTGATATCGCAAAACATCTGATTCAGGTT
CACTTCATCGACGAGCACACAGGTGAAGTGATTGATAAGCAACTGCGTCGTCAGGATTTTCTGATGTTCTTCTGTAACCGGGAACCCTGCCTGATTGGTA
TGGAGGCTTGTGGAGGCTCTCAACACTGGGCACGGGAACTGACAAAGCAGGGGCATAAAGTCCGGTTGTTGCAGGCCCGCTTCGTTAAAGCGTTCGTCAT
GGGTAATAAAAACGATGTTATGGATGCCCGGGCTATCTGGATGGCTGTACAACAGCCCGGCAAGGAAATCGCTGTCAAAACAGAAGAACAGCAGTCGGTA
CTGGTTCTGCATCGTTCCCGCAGACAACTGGTGAAGTTCCGCACCATGCAGATTAACTCCCTGCACGGTACGCTCCTGGAATTTGGTGAAACAATTCACA
AAGGTCGGGCAGCAATGGAGCGGGAGTTCCCTGAAGCACTGGAGCGGATGAAAGAGAGACTGCCACCGTATCTCATTACTGTGCTGGAAAACCAGTACTA
CCGGCTGAATGAGCTGGACTCACTGATAGAGGATATTGAAAAACAGCTTACCAGCGTGGCGAAACAGAATGAAACCTGTAAGCGGTTGCTGGATATTCCC
GGCGTTGGGCCACTTATTGCGACGGCAGCGGTGGCCACCATGGGGGAAGCATCAGCGTTTAAATCAGGGCGAGAGTTCGCGGCTTATGTTGGTCTGGTGC
CCAAACAGACTGGCTCAGGAGGGAAAATCCGCCTGCTGGGGATAAGCAAACGTGGTGATACATATCTGCGAGCCTTGTTTATTCATGGCGCAAGGGCGGC
AGCATTACTGACCAAAGAACCAGGTCCGTGGATAACCGAACTGAAAAAACGTCGTCCAGCCAGCGTGGCAATCGTCGCCATGGCAAACAAACTGGCACGA
ACAGTATGGGCGATAGCAGCTCATGGAAGTAAATACGACAAGAATCATGTCAGTATCAGACCATATTAATCGCTGATACCGATAAATATTAACTTTTAAT
GAAAGGGTGAATACTGAAAGGTTGCTCTGGCGGCCAGAGTGATGACAACGACAGGTAAGACCGTGACTCGCTAAACCTGAATAATTCTTTGAGCTTAAAG
CCCGCACAGGAAATGAGGTGTGAGTCAGCGAATTACATAGGGGCTAGCAGCTTTGTGGCTGCAAAAAGCCGGATATAAAGCTGCAACCTACCGTCAATGT
CATAACAATGGATGCCTTGCAAACGGGATGTGTTCATATAA
GTGCCCAATACGGGATACAAAAAGTTCCCTCAGACTGGAGACTCCACAAATGAAATATACACCGGTTGGCGTTGATATCGCAAAACATCTGATTCAGGTT
CACTTCATCGACGAGCACACAGGTGAAGTGATTGATAAGCAACTGCGTCGTCAGGATTTTCTGATGTTCTTCTGTAACCGGGAACCCTGCCTGATTGGTA
TGGAGGCTTGTGGAGGCTCTCAACACTGGGCACGGGAACTGACAAAGCAGGGGCATAAAGTCCGGTTGTTGCAGGCCCGCTTCGTTAAAGCGTTCGTCAT
GGGTAATAAAAACGATGTTATGGATGCCCGGGCTATCTGGATGGCTGTACAACAGCCCGGCAAGGAAATCGCTGTCAAAACAGAAGAACAGCAGTCGGTA
CTGGTTCTGCATCGTTCCCGCAGACAACTGGTGAAGTTCCGCACCATGCAGATTAACTCCCTGCACGGTACGCTCCTGGAATTTGGTGAAACAATTCACA
AAGGTCGGGCAGCAATGGAGCGGGAGTTCCCTGAAGCACTGGAGCGGATGAAAGAGAGACTGCCACCGTATCTCATTACTGTGCTGGAAAACCAGTACTA
CCGGCTGAATGAGCTGGACTCACTGATAGAGGATATTGAAAAACAGCTTACCAGCGTGGCGAAACAGAATGAAACCTGTAAGCGGTTGCTGGATATTCCC
GGCGTTGGGCCACTTATTGCGACGGCAGCGGTGGCCACCATGGGGGAAGCATCAGCGTTTAAATCAGGGCGAGAGTTCGCGGCTTATGTTGGTCTGGTGC
CCAAACAGACTGGCTCAGGAGGGAAAATCCGCCTGCTGGGGATAAGCAAACGTGGTGATACATATCTGCGAGCCTTGTTTATTCATGGCGCAAGGGCGGC
AGCATTACTGACCAAAGAACCAGGTCCGTGGATAACCGAACTGAAAAAACGTCGTCCAGCCAGCGTGGCAATCGTCGCCATGGCAAACAAACTGGCACGA
ACAGTATGGGCGATAGCAGCTCATGGAAGTAAATACGACAAGAATCATGTCAGTATCAGACCATATTAATCGCTGATACCGATAAATATTAACTTTTAAT
GAAAGGGTGAATACTGAAAGGTTGCTCTGGCGGCCAGAGTGATGACAACGACAGGTAAGACCGTGACTCGCTAAACCTGAATAATTCTTTGAGCTTAAAG
CCCGCACAGGAAATGAGGTGTGAGTCAGCGAATTACATAGGGGCTAGCAGCTTTGTGGCTGCAAAAAGCCGGATATAAAGCTGCAACCTACCGTCAATGT
CATAACAATGGATGCCTTGCAAACGGGATGTGTTCATATAA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1020 bp | 339 aa | 150 | 1169 | + | No |
Chemistry : DDE
ORF sequence :
MKYTPVGVDIAKHLIQVHFIDEHTGEVIDKQLRRQDFLMFFCNREPCLIGMEACGGSQHWARELTKQGHKVRLLQARFVKAFVMGNKNDVMDARAIWMAV
QQPGKEIAVKTEEQQSVLVLHRSRRQLVKFRTMQINSLHGTLLEFGETIHKGRAAMEREFPEALERMKERLPPYLITVLENQYYRLNELDSLIEDIEKQL
TSVAKQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSGREFAAYVGLVPKQTGSGGKIRLLGISKRGDTYLRALFIHGARAAALLTKEPGPWITELKK
RRPASVAIVAMANKLARTVWAIAAHGSKYDKNHVSIRPY
QQPGKEIAVKTEEQQSVLVLHRSRRQLVKFRTMQINSLHGTLLEFGETIHKGRAAMEREFPEALERMKERLPPYLITVLENQYYRLNELDSLIEDIEKQL
TSVAKQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSGREFAAYVGLVPKQTGSGGKIRLLGISKRGDTYLRALFIHGARAAALLTKEPGPWITELKK
RRPASVAIVAMANKLARTVWAIAAHGSKYDKNHVSIRPY
Blast result :
Comments
ISEc66 is 96% aa similar to ISSso1.
References
1] Grace Blackwell (2016) Direct submission to ISfinder