ISEc66

  • Family IS110
  • Group IS1111
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Escherichia coli
Escherichia coli
DNA section
IS Length : 1441 bp

Ends


IR Length : 13

IRL : aaATGTAATGAACACATCCCACCCCATTAAGTAAGGTGCACAGTGATAGA
IRR : tTATATGAACACATCCCGTTTGCAAGGCATCCATTGTTATGACATTGACG

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

AAATGTAATGAACACATCCCACCCCATTAAGTAAGGTGCACAGTGATAGATGAAGGGAAATACAGGAAGGTGTGGAGCCTCGCAGATTTCCGGCATCATA
GTGCCCAATACGGGATACAAAAAGTTCCCTCAGACTGGAGACTCCACAAATGAAATATACACCGGTTGGCGTTGATATCGCAAAACATCTGATTCAGGTT
CACTTCATCGACGAGCACACAGGTGAAGTGATTGATAAGCAACTGCGTCGTCAGGATTTTCTGATGTTCTTCTGTAACCGGGAACCCTGCCTGATTGGTA
TGGAGGCTTGTGGAGGCTCTCAACACTGGGCACGGGAACTGACAAAGCAGGGGCATAAAGTCCGGTTGTTGCAGGCCCGCTTCGTTAAAGCGTTCGTCAT
GGGTAATAAAAACGATGTTATGGATGCCCGGGCTATCTGGATGGCTGTACAACAGCCCGGCAAGGAAATCGCTGTCAAAACAGAAGAACAGCAGTCGGTA
CTGGTTCTGCATCGTTCCCGCAGACAACTGGTGAAGTTCCGCACCATGCAGATTAACTCCCTGCACGGTACGCTCCTGGAATTTGGTGAAACAATTCACA
AAGGTCGGGCAGCAATGGAGCGGGAGTTCCCTGAAGCACTGGAGCGGATGAAAGAGAGACTGCCACCGTATCTCATTACTGTGCTGGAAAACCAGTACTA
CCGGCTGAATGAGCTGGACTCACTGATAGAGGATATTGAAAAACAGCTTACCAGCGTGGCGAAACAGAATGAAACCTGTAAGCGGTTGCTGGATATTCCC
GGCGTTGGGCCACTTATTGCGACGGCAGCGGTGGCCACCATGGGGGAAGCATCAGCGTTTAAATCAGGGCGAGAGTTCGCGGCTTATGTTGGTCTGGTGC
CCAAACAGACTGGCTCAGGAGGGAAAATCCGCCTGCTGGGGATAAGCAAACGTGGTGATACATATCTGCGAGCCTTGTTTATTCATGGCGCAAGGGCGGC
AGCATTACTGACCAAAGAACCAGGTCCGTGGATAACCGAACTGAAAAAACGTCGTCCAGCCAGCGTGGCAATCGTCGCCATGGCAAACAAACTGGCACGA
ACAGTATGGGCGATAGCAGCTCATGGAAGTAAATACGACAAGAATCATGTCAGTATCAGACCATATTAATCGCTGATACCGATAAATATTAACTTTTAAT
GAAAGGGTGAATACTGAAAGGTTGCTCTGGCGGCCAGAGTGATGACAACGACAGGTAAGACCGTGACTCGCTAAACCTGAATAATTCTTTGAGCTTAAAG
CCCGCACAGGAAATGAGGTGTGAGTCAGCGAATTACATAGGGGCTAGCAGCTTTGTGGCTGCAAAAAGCCGGATATAAAGCTGCAACCTACCGTCAATGT
CATAACAATGGATGCCTTGCAAACGGGATGTGTTCATATAA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1020 bp339 aa1501169+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKYTPVGVDIAKHLIQVHFIDEHTGEVIDKQLRRQDFLMFFCNREPCLIGMEACGGSQHWARELTKQGHKVRLLQARFVKAFVMGNKNDVMDARAIWMAV
QQPGKEIAVKTEEQQSVLVLHRSRRQLVKFRTMQINSLHGTLLEFGETIHKGRAAMEREFPEALERMKERLPPYLITVLENQYYRLNELDSLIEDIEKQL
TSVAKQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSGREFAAYVGLVPKQTGSGGKIRLLGISKRGDTYLRALFIHGARAAALLTKEPGPWITELKK
RRPASVAIVAMANKLARTVWAIAAHGSKYDKNHVSIRPY

 

Blast result :
Comments
ISEc66 is 96% aa similar to ISSso1.
References
1] Grace Blackwell (2016) Direct submission to ISfinder