ISAcc2
- Family IS1182
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
JDSS02000041 | ND | Accumulibacter sp. | Accumulibacter sp. SK-01 Candidatus Accumulibacter sp. SK-01 |
DNA section
IS Length : 1608 bp
Ends
IR Length : 15/19
IRL : GAGGCTGTGAAAATATCCCGCGAGTCGGCCCGGGCACGGCGGAGCAGGTA
IRR : GAGGCTGTGAATTTTTCACTTCCGCACCGCGTTGGGCACAATTAGGCGGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACTACGCGCGC | TGA | GCCGCCAGTTGCTCG | 3 |
DNA sequence
GAGGCTGTGAAAATATCCCGCGAGTCGGCCCGGGCACGGCGGAGCAGGTATAATGCTGGGGTCATTGATATTGTCAGGCTACGAGCATGATCGAGACTTC
CCTGCTTTTTCCCGACGAGCCGACGACGCCAGCGAAGCCGACGAGCCAGAGTTGTGCGAAGGCATCGTCACCGAAGGCGGCGGCGCGCGTACTGATGCCG
AACCGCAATCAGCTGGAATGGCGGGCGAGTGACCTGGAATCGCTGCTACCGCCTGGGCACCGAGCCAGGATCGTCTGGGGGTATGTTGAGCGGCAGAACC
TGGAAGGGCTGTATGCCGGAATCAAAGTGGTTGAGGGCGGAGTAGGACGAGCGGCAATTGAGCCGGAGATTCTGTACGCCCTGTGGCTTGACGCCACCCT
GGAAGGAGTCGGTGGTGCTCGTGCGCTGGCCAGACTGACGCAGGCTCATGACGCCTACCGGTGGATCTGTGGTGGCGTGCAAGTCAATGACCACACCTGG
GCCGATTTTCGCAGCCACCCAGGGGACGCCTTGGACGATCTGTTGACCGACAACGTCGCGAGTCTGATGGCCGCGGGAGCCGTCAAGCTCAAGGCGGCGG
CGCAGGACGGGATGCGAGTACGAGCGAGTGCCGGAGCCGCCTCGTTCCGGCGAGAAGAGAAGCTCAAAGCGTCCCTCGAAGCGGCGCGGGAGCAGGTGAG
CCGCCTCAAGGCGCAAGGGGATGACGACCCGGTCGGCGAAACAGCGCGCAAGCAAGCCGCACAGCGGCGTGCGGCGGCGGAACGGGAAGCGCGCATCGAA
GCCGCCTTGGCTCGGCTGCCCGAGCTGGCGGCGATCAAGAAGGGCCAAGGAAAGGACCCGAAGGAAGCGCGTGCCTCGACCACCGATGCTGACGCAACGG
TCATGAAGAGGGGGGATGGGGGATTTCGGCCGGCGTTCAACTTTCAGTACGCCACCGACACCGAAAGTCAGGTGATCATCGGGGTGGAGGTGGTGACCGC
CGGCAGCGACCCGGGACAGATGTCACCGATGGTTGAGCAGGTCAGCGAACGCTGTGGTCAGACCCCGGAGAGTTGGCTGGTCGATGGCGGCTATCCTGGG
CATGGGCAACTCGACGCGGTGGCCGAGGAGACCCCCGTCTATGCGCCCGTGCCGAAGACCAAAGACCCGACAGTCGACGTTCACCAAGCGAAGGCAAAGG
ACAGCCCGGCGGTAGCCCAATGGCGGGAACGTATGGGAAGCGATGAGGCCAAGGCTCTCTACAAGGATCGCGCGGCGACGGCCGAATGTGTGAATGCGCT
GGCACGCAACCGCGGCCTGAAGTGCTTACTAGTTCGCGGGCTGAAGAAAGTCAAGGGCGTCGCGTTGCTGTTCGCACTGGCGCACAACCTCATGCGCGCC
GCTACGCTCGCACCCGAACTGGTCGGCCTAGGGACAGGAACGTCCGCCGTACCGCAAATGGCAGGGTAATCGCGAGAAAAGCGCGGAAAAGGGGTAGATC
CAGGCCAAAAGGCTAGCCACGACATGCATTAAGCATAATTTGGCCCAGGCGGGCGCCAGCCGCCTAATTGTGCCCAACGCGGTGCGGAAGTGAAAAATTC
ACAGCCTC
CCTGCTTTTTCCCGACGAGCCGACGACGCCAGCGAAGCCGACGAGCCAGAGTTGTGCGAAGGCATCGTCACCGAAGGCGGCGGCGCGCGTACTGATGCCG
AACCGCAATCAGCTGGAATGGCGGGCGAGTGACCTGGAATCGCTGCTACCGCCTGGGCACCGAGCCAGGATCGTCTGGGGGTATGTTGAGCGGCAGAACC
TGGAAGGGCTGTATGCCGGAATCAAAGTGGTTGAGGGCGGAGTAGGACGAGCGGCAATTGAGCCGGAGATTCTGTACGCCCTGTGGCTTGACGCCACCCT
GGAAGGAGTCGGTGGTGCTCGTGCGCTGGCCAGACTGACGCAGGCTCATGACGCCTACCGGTGGATCTGTGGTGGCGTGCAAGTCAATGACCACACCTGG
GCCGATTTTCGCAGCCACCCAGGGGACGCCTTGGACGATCTGTTGACCGACAACGTCGCGAGTCTGATGGCCGCGGGAGCCGTCAAGCTCAAGGCGGCGG
CGCAGGACGGGATGCGAGTACGAGCGAGTGCCGGAGCCGCCTCGTTCCGGCGAGAAGAGAAGCTCAAAGCGTCCCTCGAAGCGGCGCGGGAGCAGGTGAG
CCGCCTCAAGGCGCAAGGGGATGACGACCCGGTCGGCGAAACAGCGCGCAAGCAAGCCGCACAGCGGCGTGCGGCGGCGGAACGGGAAGCGCGCATCGAA
GCCGCCTTGGCTCGGCTGCCCGAGCTGGCGGCGATCAAGAAGGGCCAAGGAAAGGACCCGAAGGAAGCGCGTGCCTCGACCACCGATGCTGACGCAACGG
TCATGAAGAGGGGGGATGGGGGATTTCGGCCGGCGTTCAACTTTCAGTACGCCACCGACACCGAAAGTCAGGTGATCATCGGGGTGGAGGTGGTGACCGC
CGGCAGCGACCCGGGACAGATGTCACCGATGGTTGAGCAGGTCAGCGAACGCTGTGGTCAGACCCCGGAGAGTTGGCTGGTCGATGGCGGCTATCCTGGG
CATGGGCAACTCGACGCGGTGGCCGAGGAGACCCCCGTCTATGCGCCCGTGCCGAAGACCAAAGACCCGACAGTCGACGTTCACCAAGCGAAGGCAAAGG
ACAGCCCGGCGGTAGCCCAATGGCGGGAACGTATGGGAAGCGATGAGGCCAAGGCTCTCTACAAGGATCGCGCGGCGACGGCCGAATGTGTGAATGCGCT
GGCACGCAACCGCGGCCTGAAGTGCTTACTAGTTCGCGGGCTGAAGAAAGTCAAGGGCGTCGCGTTGCTGTTCGCACTGGCGCACAACCTCATGCGCGCC
GCTACGCTCGCACCCGAACTGGTCGGCCTAGGGACAGGAACGTCCGCCGTACCGCAAATGGCAGGGTAATCGCGAGAAAAGCGCGGAAAAGGGGTAGATC
CAGGCCAAAAGGCTAGCCACGACATGCATTAAGCATAATTTGGCCCAGGCGGGCGCCAGCCGCCTAATTGTGCCCAACGCGGTGCGGAAGTGAAAAATTC
ACAGCCTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1383 bp | 460 aa | 87 | 1469 | + | No |
Chemistry : DDE
ORF sequence :
MIETSLLFPDEPTTPAKPTSQSCAKASSPKAAARVLMPNRNQLEWRASDLESLLPPGHRARIVWGYVERQNLEGLYAGIKVVEGGVGRAAIEPEILYALW
LDATLEGVGGARALARLTQAHDAYRWICGGVQVNDHTWADFRSHPGDALDDLLTDNVASLMAAGAVKLKAAAQDGMRVRASAGAASFRREEKLKASLEAA
REQVSRLKAQGDDDPVGETARKQAAQRRAAAEREARIEAALARLPELAAIKKGQGKDPKEARASTTDADATVMKRGDGGFRPAFNFQYATDTESQVIIGV
EVVTAGSDPGQMSPMVEQVSERCGQTPESWLVDGGYPGHGQLDAVAEETPVYAPVPKTKDPTVDVHQAKAKDSPAVAQWRERMGSDEAKALYKDRAATAE
CVNALARNRGLKCLLVRGLKKVKGVALLFALAHNLMRAATLAPELVGLGTGTSAVPQMAG
LDATLEGVGGARALARLTQAHDAYRWICGGVQVNDHTWADFRSHPGDALDDLLTDNVASLMAAGAVKLKAAAQDGMRVRASAGAASFRREEKLKASLEAA
REQVSRLKAQGDDDPVGETARKQAAQRRAAAEREARIEAALARLPELAAIKKGQGKDPKEARASTTDADATVMKRGDGGFRPAFNFQYATDTESQVIIGV
EVVTAGSDPGQMSPMVEQVSERCGQTPESWLVDGGYPGHGQLDAVAEETPVYAPVPKTKDPTVDVHQAKAKDSPAVAQWRERMGSDEAKALYKDRAATAE
CVNALARNRGLKCLLVRGLKKVKGVALLFALAHNLMRAATLAPELVGLGTGTSAVPQMAG
Blast result :
Comments
ISAcc2 is 89% aa similar to ISAcc1.
References
1] ISfinder annotation (2016)
2] Skennerton,C.T., Barr,J.J., Slater,F.R., Bond,P.L. and Tyson,G.W. (2014) Direct submission GenBank.
2] Skennerton,C.T., Barr,J.J., Slater,F.R., Bond,P.L. and Tyson,G.W. (2014) Direct submission GenBank.