ISEcl7

  • Family IS5
  • Group IS903
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
JZKY01000039 ND Enterobacter cloacae
Enterobacter cloacae CIDEIMsCOL14
Enterobacter hormaechei subsp. oharae
DNA section
IS Length : 1052 bp

Ends


IR Length : 17/18

IRL : GGCTTTGTTGCACAAATCGGCCCATCAGCGGCCGAGGCGCAGCACGGGTA
IRR : GGCTTTGTTGCATAAATCAATTGAGCGCGTAGTACCCCAAACCCCAGACG

Insertion site


Left flankDirect repeatRight flankDR Length
AAATATGGGGCGAATTCAAACATGAGGTG9

DNA sequence

GGCTTTGTTGCACAAATCGGCCCATCAGCGGCCGAGGCGCAGCACGGGTAAACTGACGGCATGATTGCTCCCGTAAAGCTGAAGTACCGAACGACCAACT
GGAAAGACTACAACGCGGCATTGAAAGCCCGCGGCTCGCTGCTGATCTGGCTGGACAAGGACATGTGCTGGCACGGCAGTGCGAGCGGCAAGCGGGGCCG
CAGTCCGAAGTACAGCGAGGCGGCGGTCCAGTTCTGCCTGACCGTTAAGGGCCTGTTCAATCTGCCCTTGCGCCAGGCCATGGGTATGACGCAGAGTCTG
CTCGGGTTGGCCGGACTGGACTGGCAAGTGCCCGACTTCAGCACGGTCAGCCGGCGCCAGAAGCGTCTTTCGGTGACGATCGGAGCGCAGCCGACGACGA
CGGGATTGCACCTGCTGGTCGACAGTACAGGCATCAAGATGCTGGGCGAAGGCGAGTGGAAGACGAAGAAGCATGGTGCCGACTACCGTCGCCAATGGCG
CAAGATCCACCTTGGCATTGACGCGGCCACGCTGGAAATCCGGGCGATCGAGGTGACCGACAATGCCACCGGCGATGCCCCAATGCTGCCGTGCTTGCTC
GACCAGATACCCACCGAGGAGGTTGTCGCGAGCGTCAGTGGCGACGGCGCCTACGACACGAAAGGCTGCCACGAAGCGATTGCACAACGCGGAGCGCAGG
CACTCATTCCGACACGCAAGAACGCCAAGCCATGGAAGGACCAGCGTCCCGGTGCCAAAGCGCGCAATGCCATCCTGGCGGCCACCCGCCGGCTTGGCCG
GAAGATCTGGAAAAAGTGGAGCGGGTATCACCGGCGCAGCCTTGTCGAGACCAAAATGCGTTGCTTCAAGCTGCTTGGTGAACGCGTCATGGCGCGCGAC
TTCGACCGTCAGGTCGCCGAGTTGCAGGTCCGTGCCGCCATCCTCAATCGCTTCACGCGCTTGGGCACGCCCACGACCGTAGCGGTGACCATGCCGTAAA
TCCGTCTGGGGTTTGGGGTACTACGCGCTCAATTGATTTATGCAACAAAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
939 bp312 aa61999+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MIAPVKLKYRTTNWKDYNAALKARGSLLIWLDKDMCWHGSASGKRGRSPKYSEAAVQFCLTVKGLFNLPLRQAMGMTQSLLGLAGLDWQVPDFSTVSRRQ
KRLSVTIGAQPTTTGLHLLVDSTGIKMLGEGEWKTKKHGADYRRQWRKIHLGIDAATLEIRAIEVTDNATGDAPMLPCLLDQIPTEEVVASVSGDGAYDT
KGCHEAIAQRGAQALIPTRKNAKPWKDQRPGAKARNAILAATRRLGRKIWKKWSGYHRRSLVETKMRCFKLLGERVMARDFDRQVAELQVRAAILNRFTR
LGTPTTVAVTMP

 

Blast result :
Comments
ISEcl7 is 87% aa similar to ISJsp2.
References
1] ISfinder annotation (2016)
2] Adams,M., Sutton,G., Nelson,K., Bonomo,R., McCorrison,J., Sanka,R., Brinkac,L. and Nierman,W.