ISPlas1
- Family ISNCY
- Group ISDol1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP011273 | ND | Planctomyces sp. | Planctomyces sp. SH-PL62 |
DNA section
IS Length : 1585 bp
Ends
IR Length : 15
IRL : GTTCGCGGTGCGAAACAGGCGGGATTCGCGGCATCTGATACGCTCGAGGC
IRR : GTTCGCGGTGCGAAATTGAAGTCGTTCTCCCAGTGAAACTTGCGTCTCGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCGTCAGACAGAACC | Ta | GTTGGACTGTCACCGA | 2 |
DNA sequence
GTTCGCGGTGCGAAACAGGCGGGATTCGCGGCATCTGATACGCTCGAGGCACGTCCAGAACCGCGCCGAACGGACCGATGGCGGGCCGGTGCCATGCTCA
GGAATCGCTACCCCCGGACGGATCTCTTCGCGCTCGTCCCCCAGCTCGGGCTCCGCTTGGAGCCCCAGCTCGAGCAGCTCGACCGCCTGCTCGACGACGA
CGAGCTGTTCGAGCTCGTCCGCGGCGACCTCGGCCGCCGCCATCCCCTGACCCGCTCCCGAGGCCGGCCGTCCACCCCGGTCGAGGTGATCCTCCGGATG
CTCGTGGTCATGCGGCTCTACGGCTGGAGCTACGAGCAGGCCGAGTACTTCGTCAACGACAGCCTGGTGCTCCGCCAGTTCTGCCGAGTCTACTTCGAGC
GCGTCCCCGACGACACCACGCTGATCCGCTGGGCCGCTGCCATCGGGCCCGAGACCCTGCAGACGCTCAACGACCGGGTCGTCCAGCTGGCCCGGTCGCT
GAGGGCGACCCGCGGCCGCAGGCTCCGGGTCGACACGACGGCCGTCGAGACGAACGTCCATTTCCCGACCGACAGCGGCCTGCTCGTGGACGGCGTGCGG
GTCGTCTCGCGGCTCCTGCGTCGGGCCAGGTCGGCGCTCGGCGAGACGGCGGCCGACCTGGGAGAGGCGTTCCGCAGCCGGATCCGCACGGCGCGCAGGG
TCGCGCAGCAGCTGCACCGCCTGGCCCGCCGCAAGGGGGACCAGGGCCGCGAGACGATGAAGGCGGCGTACGGCCGGCTCATCGCCGCTGCCAAGCGGAC
GGCGGCCCAGGGGCGACGCGTCTCCGAGACGCTCCGCCAGCGGACCGACGAGCCGTCGACGCGAAGGTTGGCCGAGCGGCTCGCTGAAGCCGTCCCGCAG
CTGAAGCGGGCCATCCGACAGGCCGAGCGACGCGTCCTGAAGGGCGAGTCGGTCCCCAGCGGCGAGAAGCTGTTGTCGCTGTTCGAGCCGCACACCCAGG
TGGTCCCGCGGTTCAAGCCGGGATGGCCGGTGGAGTTCGGCCGCAAGATCCGGCTGGACGAGGTCGAGGGCGGGATCGTCGCGGGCTACGCGGTGCTGGA
GCACGCCGGAGGCCAGGACCAGCCTTACCTGTGCGACGCCTTGGCCGACCACGAGCGCCGATTCGGCCGGGCTCCAGGCCTCCTGGCCGCCGACCGGGGG
ATGGCGTCGGCGGCCAACGAGCGGCTGGCGGAACAGGCGGGCGTCAAGCACGTCGCGCTGCCTCACGTCGGCAAGGCGTCGCTGGGTCGGCGGGCCGAGG
AGAAGGGGCGGCGGTTCCGCGAGGGTTACCGGTTCCGGGCCGGGATCGAGGGGCGGATCCACGCGCTGAAGCGGGATTACGGGTTGAAGCGATGTCGGTA
CCGCGGCGAGCGGGGCTTCGGGCGGTGGGTCGGGTGGGGCGTCCTGGCCCACAACCTGGCGAAGGTCGCGGGGGCGGCCCGGGGGTGAGCCGGGGCCCGA
GAGGGTCAGAGACCGACCGTGCCAGGGCCGGGCCAGCGAGACGCAAGTTTCACTGGGAGAACGACTTCAATTTCGCACCGCGAAC
GGAATCGCTACCCCCGGACGGATCTCTTCGCGCTCGTCCCCCAGCTCGGGCTCCGCTTGGAGCCCCAGCTCGAGCAGCTCGACCGCCTGCTCGACGACGA
CGAGCTGTTCGAGCTCGTCCGCGGCGACCTCGGCCGCCGCCATCCCCTGACCCGCTCCCGAGGCCGGCCGTCCACCCCGGTCGAGGTGATCCTCCGGATG
CTCGTGGTCATGCGGCTCTACGGCTGGAGCTACGAGCAGGCCGAGTACTTCGTCAACGACAGCCTGGTGCTCCGCCAGTTCTGCCGAGTCTACTTCGAGC
GCGTCCCCGACGACACCACGCTGATCCGCTGGGCCGCTGCCATCGGGCCCGAGACCCTGCAGACGCTCAACGACCGGGTCGTCCAGCTGGCCCGGTCGCT
GAGGGCGACCCGCGGCCGCAGGCTCCGGGTCGACACGACGGCCGTCGAGACGAACGTCCATTTCCCGACCGACAGCGGCCTGCTCGTGGACGGCGTGCGG
GTCGTCTCGCGGCTCCTGCGTCGGGCCAGGTCGGCGCTCGGCGAGACGGCGGCCGACCTGGGAGAGGCGTTCCGCAGCCGGATCCGCACGGCGCGCAGGG
TCGCGCAGCAGCTGCACCGCCTGGCCCGCCGCAAGGGGGACCAGGGCCGCGAGACGATGAAGGCGGCGTACGGCCGGCTCATCGCCGCTGCCAAGCGGAC
GGCGGCCCAGGGGCGACGCGTCTCCGAGACGCTCCGCCAGCGGACCGACGAGCCGTCGACGCGAAGGTTGGCCGAGCGGCTCGCTGAAGCCGTCCCGCAG
CTGAAGCGGGCCATCCGACAGGCCGAGCGACGCGTCCTGAAGGGCGAGTCGGTCCCCAGCGGCGAGAAGCTGTTGTCGCTGTTCGAGCCGCACACCCAGG
TGGTCCCGCGGTTCAAGCCGGGATGGCCGGTGGAGTTCGGCCGCAAGATCCGGCTGGACGAGGTCGAGGGCGGGATCGTCGCGGGCTACGCGGTGCTGGA
GCACGCCGGAGGCCAGGACCAGCCTTACCTGTGCGACGCCTTGGCCGACCACGAGCGCCGATTCGGCCGGGCTCCAGGCCTCCTGGCCGCCGACCGGGGG
ATGGCGTCGGCGGCCAACGAGCGGCTGGCGGAACAGGCGGGCGTCAAGCACGTCGCGCTGCCTCACGTCGGCAAGGCGTCGCTGGGTCGGCGGGCCGAGG
AGAAGGGGCGGCGGTTCCGCGAGGGTTACCGGTTCCGGGCCGGGATCGAGGGGCGGATCCACGCGCTGAAGCGGGATTACGGGTTGAAGCGATGTCGGTA
CCGCGGCGAGCGGGGCTTCGGGCGGTGGGTCGGGTGGGGCGTCCTGGCCCACAACCTGGCGAAGGTCGCGGGGGCGGCCCGGGGGTGAGCCGGGGCCCGA
GAGGGTCAGAGACCGACCGTGCCAGGGCCGGGCCAGCGAGACGCAAGTTTCACTGGGAGAACGACTTCAATTTCGCACCGCGAAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1395 bp | 464 aa | 94 | 1488 | + | No |
Chemistry : DDE
ORF sequence :
MLRNRYPRTDLFALVPQLGLRLEPQLEQLDRLLDDDELFELVRGDLGRRHPLTRSRGRPSTPVEVILRMLVVMRLYGWSYEQAEYFVNDSLVLRQFCRVY
FERVPDDTTLIRWAAAIGPETLQTLNDRVVQLARSLRATRGRRLRVDTTAVETNVHFPTDSGLLVDGVRVVSRLLRRARSALGETAADLGEAFRSRIRTA
RRVAQQLHRLARRKGDQGRETMKAAYGRLIAAAKRTAAQGRRVSETLRQRTDEPSTRRLAERLAEAVPQLKRAIRQAERRVLKGESVPSGEKLLSLFEPH
TQVVPRFKPGWPVEFGRKIRLDEVEGGIVAGYAVLEHAGGQDQPYLCDALADHERRFGRAPGLLAADRGMASAANERLAEQAGVKHVALPHVGKASLGRR
AEEKGRRFREGYRFRAGIEGRIHALKRDYGLKRCRYRGERGFGRWVGWGVLAHNLAKVAGAARG
FERVPDDTTLIRWAAAIGPETLQTLNDRVVQLARSLRATRGRRLRVDTTAVETNVHFPTDSGLLVDGVRVVSRLLRRARSALGETAADLGEAFRSRIRTA
RRVAQQLHRLARRKGDQGRETMKAAYGRLIAAAKRTAAQGRRVSETLRQRTDEPSTRRLAERLAEAVPQLKRAIRQAERRVLKGESVPSGEKLLSLFEPH
TQVVPRFKPGWPVEFGRKIRLDEVEGGIVAGYAVLEHAGGQDQPYLCDALADHERRFGRAPGLLAADRGMASAANERLAEQAGVKHVALPHVGKASLGRR
AEEKGRRFREGYRFRAGIEGRIHALKRDYGLKRCRYRGERGFGRWVGWGVLAHNLAKVAGAARG
Blast result :
Comments
ISPlas1 is 69% aa similar to ISKra7.
References
1] ISfinder annotation (2016)
2] van der Voort,M. and Raaijmakers,J.M. (2015) Direct submission GenBank.
2] van der Voort,M. and Raaijmakers,J.M. (2015) Direct submission GenBank.