ISPlas1

  • Family ISNCY
  • Group ISDol1
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP011273 ND Planctomyces sp.
Planctomyces sp. SH-PL62
DNA section
IS Length : 1585 bp

Ends


IR Length : 15

IRL : GTTCGCGGTGCGAAACAGGCGGGATTCGCGGCATCTGATACGCTCGAGGC
IRR : GTTCGCGGTGCGAAATTGAAGTCGTTCTCCCAGTGAAACTTGCGTCTCGC

Insertion site


Left flankDirect repeatRight flankDR Length
CCGTCAGACAGAACCTaGTTGGACTGTCACCGA2

DNA sequence

GTTCGCGGTGCGAAACAGGCGGGATTCGCGGCATCTGATACGCTCGAGGCACGTCCAGAACCGCGCCGAACGGACCGATGGCGGGCCGGTGCCATGCTCA
GGAATCGCTACCCCCGGACGGATCTCTTCGCGCTCGTCCCCCAGCTCGGGCTCCGCTTGGAGCCCCAGCTCGAGCAGCTCGACCGCCTGCTCGACGACGA
CGAGCTGTTCGAGCTCGTCCGCGGCGACCTCGGCCGCCGCCATCCCCTGACCCGCTCCCGAGGCCGGCCGTCCACCCCGGTCGAGGTGATCCTCCGGATG
CTCGTGGTCATGCGGCTCTACGGCTGGAGCTACGAGCAGGCCGAGTACTTCGTCAACGACAGCCTGGTGCTCCGCCAGTTCTGCCGAGTCTACTTCGAGC
GCGTCCCCGACGACACCACGCTGATCCGCTGGGCCGCTGCCATCGGGCCCGAGACCCTGCAGACGCTCAACGACCGGGTCGTCCAGCTGGCCCGGTCGCT
GAGGGCGACCCGCGGCCGCAGGCTCCGGGTCGACACGACGGCCGTCGAGACGAACGTCCATTTCCCGACCGACAGCGGCCTGCTCGTGGACGGCGTGCGG
GTCGTCTCGCGGCTCCTGCGTCGGGCCAGGTCGGCGCTCGGCGAGACGGCGGCCGACCTGGGAGAGGCGTTCCGCAGCCGGATCCGCACGGCGCGCAGGG
TCGCGCAGCAGCTGCACCGCCTGGCCCGCCGCAAGGGGGACCAGGGCCGCGAGACGATGAAGGCGGCGTACGGCCGGCTCATCGCCGCTGCCAAGCGGAC
GGCGGCCCAGGGGCGACGCGTCTCCGAGACGCTCCGCCAGCGGACCGACGAGCCGTCGACGCGAAGGTTGGCCGAGCGGCTCGCTGAAGCCGTCCCGCAG
CTGAAGCGGGCCATCCGACAGGCCGAGCGACGCGTCCTGAAGGGCGAGTCGGTCCCCAGCGGCGAGAAGCTGTTGTCGCTGTTCGAGCCGCACACCCAGG
TGGTCCCGCGGTTCAAGCCGGGATGGCCGGTGGAGTTCGGCCGCAAGATCCGGCTGGACGAGGTCGAGGGCGGGATCGTCGCGGGCTACGCGGTGCTGGA
GCACGCCGGAGGCCAGGACCAGCCTTACCTGTGCGACGCCTTGGCCGACCACGAGCGCCGATTCGGCCGGGCTCCAGGCCTCCTGGCCGCCGACCGGGGG
ATGGCGTCGGCGGCCAACGAGCGGCTGGCGGAACAGGCGGGCGTCAAGCACGTCGCGCTGCCTCACGTCGGCAAGGCGTCGCTGGGTCGGCGGGCCGAGG
AGAAGGGGCGGCGGTTCCGCGAGGGTTACCGGTTCCGGGCCGGGATCGAGGGGCGGATCCACGCGCTGAAGCGGGATTACGGGTTGAAGCGATGTCGGTA
CCGCGGCGAGCGGGGCTTCGGGCGGTGGGTCGGGTGGGGCGTCCTGGCCCACAACCTGGCGAAGGTCGCGGGGGCGGCCCGGGGGTGAGCCGGGGCCCGA
GAGGGTCAGAGACCGACCGTGCCAGGGCCGGGCCAGCGAGACGCAAGTTTCACTGGGAGAACGACTTCAATTTCGCACCGCGAAC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1395 bp464 aa941488+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MLRNRYPRTDLFALVPQLGLRLEPQLEQLDRLLDDDELFELVRGDLGRRHPLTRSRGRPSTPVEVILRMLVVMRLYGWSYEQAEYFVNDSLVLRQFCRVY
FERVPDDTTLIRWAAAIGPETLQTLNDRVVQLARSLRATRGRRLRVDTTAVETNVHFPTDSGLLVDGVRVVSRLLRRARSALGETAADLGEAFRSRIRTA
RRVAQQLHRLARRKGDQGRETMKAAYGRLIAAAKRTAAQGRRVSETLRQRTDEPSTRRLAERLAEAVPQLKRAIRQAERRVLKGESVPSGEKLLSLFEPH
TQVVPRFKPGWPVEFGRKIRLDEVEGGIVAGYAVLEHAGGQDQPYLCDALADHERRFGRAPGLLAADRGMASAANERLAEQAGVKHVALPHVGKASLGRR
AEEKGRRFREGYRFRAGIEGRIHALKRDYGLKRCRYRGERGFGRWVGWGVLAHNLAKVAGAARG

 

Blast result :
Comments
ISPlas1 is 69% aa similar to ISKra7.
References
1] ISfinder annotation (2016)
2] van der Voort,M. and Raaijmakers,J.M. (2015) Direct submission GenBank.