ISStsp10

  • Family ISNCY
  • Group ISDol1
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP003987 ND Streptomyces sp.
Streptomyces sp. 769
DNA section
IS Length : 1564 bp

Ends


IR Length : 15/16

IRL : CTTGCCCCTGAAGAAGTCTGGATCGGCGTTGGGTTGACCTCTGGGGAGAG
IRR : CTTGCCCCTGAAAAAGGGTTTGGGCTGGTGAGGGGGTCGGAGCTGTTGGA

Insertion site


Left flankDirect repeatRight flankDR Length
CAGAAGCGCTCTAGCTAGGCCCTGTAGCCA6

DNA sequence

CTTGCCCCTGAAGAAGTCTGGATCGGCGTTGGGTTGACCTCTGGGGAGAGCTGGTGAGAGCGGCTCCTTGGCCGCGACAGTGGAGGCGGGGCGTTGTGGC
TGGGGGTGGGGCGATGTTGCGTGTCGCGGGAGTGCAGGATCCCTGGTGGGAGGTGCTGCCGGAGCAAGCTCGGCAGATGCCCTCCGAGTTGGCCAGGATC
GATGCGTATCTGGACGACGAGCGATTCATCGCCCCGTGGCGCGCGGTGTTCGCCGAGCGGCTGGGGCGGCCGTCGATCCCGGTCGAGACACTGCTGCGGC
TGCTGTACCTCAAGCACCGCTACCAGCTCGGGTACGAGACGCTGTGCCGTGAGGTCGCGGACTCGTTGAGCTGGCGGCGGTTCTGTCGGATCCCGCTGAC
GTCCCCGGTGCCACACCCGACCACGTTGATCAAGCTGGTGCGCCGCAGCGGAGTCCAGACCGCGGAGCAGCTCAACGCCGCGTTGCTGGGCAAGCTGGCG
GAGGACAAGCTGCTGCGATGCCGCAAGCTGCGCATCGACACCACGGTGATCGAAGCCGATATCGACCATCCCACGGACGCCGATCTGCTGGAGCACGGGG
TACGTAAGCTGGGTCGGCTGGTGCGGCGGATCAAGGCTGCGGGTGCGGCCAGGCGCACGTCCTTCCGGGATCGCAGCCGGTCTGCGGGGCGCCGGCTGAA
GGAGATCTCGCGTACGCTGCGGCGGCGCACCGGTCAGGCGCTGGGTGAGATCGACCGGCTCACCGGTGAGATCGCGACTGTGGCTCGTGCGACCCTGCGG
GACGTGGCTGCGGTGGAGCGGAACGCTCTGCGTGCGCTGGGCAAACGGCCTTCGGGACGGCTCGCGCATCTGGTGGGTGAGCTGGCCGAGACTGCGGCAG
GCACCCGCCGGCTGCTGGAGCAGACCGCTTTGCGGCTGGCGGGCATCCGCACGATTCCCGACCGGTTGGTCTCGTTGGCCGACCCTGATGCCCGGCCGAT
CCGCAAGGGCAAGCCCCAGCACCCCACCCAGTTCGGCTACACGGCACTGGTGGCCGAGGACGAACGTGGCTTCGTCGTCGACCACAAGGTCCAGCGCGGG
AACCCACCCGACGCACCGCAGTTGGTGCCGTCGGTGGAGCGCGTCACCACGCTGACCGGCCGCCCACCGGGCACGGTCGTCGCCGACCGAGGCTTTGGCT
TCGCGGCCAACGACCAGGCCCTGACCGAACTCGGCGTCCAGCGGATCGGCCTCCAACGCGCTGGAAGACCCGGCAAGGCACGGCGTGAGTACGAACGAAG
TCGCCCGTTCCGGCGTATGCGCAACTGGAGAGTCGGTATCGAGGCCCGCATCAGCCATCTCAAACGCGGCTTCGGCTTCCGCCGCACCCGCCTCCGCCGC
CTGACCGGCGCCCAGACCTGGGCCGGACTGGGAGTCTTCGCCTACAACCTCCAGCGGATGACCACCCTCAGCCGGTGAGGCAGGGGCCAATGGGTAGCCG
TCGGACTGGTGCCCTCCAACAGCTCCGACCCCCTCACCAGCCCAAACCCTTTTTCAGGGGCAAG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1365 bp454 aa1141478+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MLRVAGVQDPWWEVLPEQARQMPSELARIDAYLDDERFIAPWRAVFAERLGRPSIPVETLLRLLYLKHRYQLGYETLCREVADSLSWRRFCRIPLTSPVP
HPTTLIKLVRRSGVQTAEQLNAALLGKLAEDKLLRCRKLRIDTTVIEADIDHPTDADLLEHGVRKLGRLVRRIKAAGAARRTSFRDRSRSAGRRLKEISR
TLRRRTGQALGEIDRLTGEIATVARATLRDVAAVERNALRALGKRPSGRLAHLVGELAETAAGTRRLLEQTALRLAGIRTIPDRLVSLADPDARPIRKGK
PQHPTQFGYTALVAEDERGFVVDHKVQRGNPPDAPQLVPSVERVTTLTGRPPGTVVADRGFGFAANDQALTELGVQRIGLQRAGRPGKARREYERSRPFR
RMRNWRVGIEARISHLKRGFGFRRTRLRRLTGAQTWAGLGVFAYNLQRMTTLSR

 

Blast result :
Comments
ISStsp10 is 95% aa similar to ISSna1.
References
1] ISfinder annotation (2016)
2] Du,Q., Wang,Q., Li,Q., Wang,L., Zhang,Z., Ren,J., Wang,J. and Wang,M. (2012) Direct submission GenBank.