ISStsp10
- Family ISNCY
- Group ISDol1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP003987 | ND | Streptomyces sp. | Streptomyces sp. 769 |
DNA section
IS Length : 1564 bp
Ends
IR Length : 15/16
IRL : CTTGCCCCTGAAGAAGTCTGGATCGGCGTTGGGTTGACCTCTGGGGAGAG
IRR : CTTGCCCCTGAAAAAGGGTTTGGGCTGGTGAGGGGGTCGGAGCTGTTGGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAGAAGCGCTC | TAGCTA | GGCCCTGTAGCCA | 6 |
DNA sequence
CTTGCCCCTGAAGAAGTCTGGATCGGCGTTGGGTTGACCTCTGGGGAGAGCTGGTGAGAGCGGCTCCTTGGCCGCGACAGTGGAGGCGGGGCGTTGTGGC
TGGGGGTGGGGCGATGTTGCGTGTCGCGGGAGTGCAGGATCCCTGGTGGGAGGTGCTGCCGGAGCAAGCTCGGCAGATGCCCTCCGAGTTGGCCAGGATC
GATGCGTATCTGGACGACGAGCGATTCATCGCCCCGTGGCGCGCGGTGTTCGCCGAGCGGCTGGGGCGGCCGTCGATCCCGGTCGAGACACTGCTGCGGC
TGCTGTACCTCAAGCACCGCTACCAGCTCGGGTACGAGACGCTGTGCCGTGAGGTCGCGGACTCGTTGAGCTGGCGGCGGTTCTGTCGGATCCCGCTGAC
GTCCCCGGTGCCACACCCGACCACGTTGATCAAGCTGGTGCGCCGCAGCGGAGTCCAGACCGCGGAGCAGCTCAACGCCGCGTTGCTGGGCAAGCTGGCG
GAGGACAAGCTGCTGCGATGCCGCAAGCTGCGCATCGACACCACGGTGATCGAAGCCGATATCGACCATCCCACGGACGCCGATCTGCTGGAGCACGGGG
TACGTAAGCTGGGTCGGCTGGTGCGGCGGATCAAGGCTGCGGGTGCGGCCAGGCGCACGTCCTTCCGGGATCGCAGCCGGTCTGCGGGGCGCCGGCTGAA
GGAGATCTCGCGTACGCTGCGGCGGCGCACCGGTCAGGCGCTGGGTGAGATCGACCGGCTCACCGGTGAGATCGCGACTGTGGCTCGTGCGACCCTGCGG
GACGTGGCTGCGGTGGAGCGGAACGCTCTGCGTGCGCTGGGCAAACGGCCTTCGGGACGGCTCGCGCATCTGGTGGGTGAGCTGGCCGAGACTGCGGCAG
GCACCCGCCGGCTGCTGGAGCAGACCGCTTTGCGGCTGGCGGGCATCCGCACGATTCCCGACCGGTTGGTCTCGTTGGCCGACCCTGATGCCCGGCCGAT
CCGCAAGGGCAAGCCCCAGCACCCCACCCAGTTCGGCTACACGGCACTGGTGGCCGAGGACGAACGTGGCTTCGTCGTCGACCACAAGGTCCAGCGCGGG
AACCCACCCGACGCACCGCAGTTGGTGCCGTCGGTGGAGCGCGTCACCACGCTGACCGGCCGCCCACCGGGCACGGTCGTCGCCGACCGAGGCTTTGGCT
TCGCGGCCAACGACCAGGCCCTGACCGAACTCGGCGTCCAGCGGATCGGCCTCCAACGCGCTGGAAGACCCGGCAAGGCACGGCGTGAGTACGAACGAAG
TCGCCCGTTCCGGCGTATGCGCAACTGGAGAGTCGGTATCGAGGCCCGCATCAGCCATCTCAAACGCGGCTTCGGCTTCCGCCGCACCCGCCTCCGCCGC
CTGACCGGCGCCCAGACCTGGGCCGGACTGGGAGTCTTCGCCTACAACCTCCAGCGGATGACCACCCTCAGCCGGTGAGGCAGGGGCCAATGGGTAGCCG
TCGGACTGGTGCCCTCCAACAGCTCCGACCCCCTCACCAGCCCAAACCCTTTTTCAGGGGCAAG
TGGGGGTGGGGCGATGTTGCGTGTCGCGGGAGTGCAGGATCCCTGGTGGGAGGTGCTGCCGGAGCAAGCTCGGCAGATGCCCTCCGAGTTGGCCAGGATC
GATGCGTATCTGGACGACGAGCGATTCATCGCCCCGTGGCGCGCGGTGTTCGCCGAGCGGCTGGGGCGGCCGTCGATCCCGGTCGAGACACTGCTGCGGC
TGCTGTACCTCAAGCACCGCTACCAGCTCGGGTACGAGACGCTGTGCCGTGAGGTCGCGGACTCGTTGAGCTGGCGGCGGTTCTGTCGGATCCCGCTGAC
GTCCCCGGTGCCACACCCGACCACGTTGATCAAGCTGGTGCGCCGCAGCGGAGTCCAGACCGCGGAGCAGCTCAACGCCGCGTTGCTGGGCAAGCTGGCG
GAGGACAAGCTGCTGCGATGCCGCAAGCTGCGCATCGACACCACGGTGATCGAAGCCGATATCGACCATCCCACGGACGCCGATCTGCTGGAGCACGGGG
TACGTAAGCTGGGTCGGCTGGTGCGGCGGATCAAGGCTGCGGGTGCGGCCAGGCGCACGTCCTTCCGGGATCGCAGCCGGTCTGCGGGGCGCCGGCTGAA
GGAGATCTCGCGTACGCTGCGGCGGCGCACCGGTCAGGCGCTGGGTGAGATCGACCGGCTCACCGGTGAGATCGCGACTGTGGCTCGTGCGACCCTGCGG
GACGTGGCTGCGGTGGAGCGGAACGCTCTGCGTGCGCTGGGCAAACGGCCTTCGGGACGGCTCGCGCATCTGGTGGGTGAGCTGGCCGAGACTGCGGCAG
GCACCCGCCGGCTGCTGGAGCAGACCGCTTTGCGGCTGGCGGGCATCCGCACGATTCCCGACCGGTTGGTCTCGTTGGCCGACCCTGATGCCCGGCCGAT
CCGCAAGGGCAAGCCCCAGCACCCCACCCAGTTCGGCTACACGGCACTGGTGGCCGAGGACGAACGTGGCTTCGTCGTCGACCACAAGGTCCAGCGCGGG
AACCCACCCGACGCACCGCAGTTGGTGCCGTCGGTGGAGCGCGTCACCACGCTGACCGGCCGCCCACCGGGCACGGTCGTCGCCGACCGAGGCTTTGGCT
TCGCGGCCAACGACCAGGCCCTGACCGAACTCGGCGTCCAGCGGATCGGCCTCCAACGCGCTGGAAGACCCGGCAAGGCACGGCGTGAGTACGAACGAAG
TCGCCCGTTCCGGCGTATGCGCAACTGGAGAGTCGGTATCGAGGCCCGCATCAGCCATCTCAAACGCGGCTTCGGCTTCCGCCGCACCCGCCTCCGCCGC
CTGACCGGCGCCCAGACCTGGGCCGGACTGGGAGTCTTCGCCTACAACCTCCAGCGGATGACCACCCTCAGCCGGTGAGGCAGGGGCCAATGGGTAGCCG
TCGGACTGGTGCCCTCCAACAGCTCCGACCCCCTCACCAGCCCAAACCCTTTTTCAGGGGCAAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1365 bp | 454 aa | 114 | 1478 | + | No |
Chemistry : DDE
ORF sequence :
MLRVAGVQDPWWEVLPEQARQMPSELARIDAYLDDERFIAPWRAVFAERLGRPSIPVETLLRLLYLKHRYQLGYETLCREVADSLSWRRFCRIPLTSPVP
HPTTLIKLVRRSGVQTAEQLNAALLGKLAEDKLLRCRKLRIDTTVIEADIDHPTDADLLEHGVRKLGRLVRRIKAAGAARRTSFRDRSRSAGRRLKEISR
TLRRRTGQALGEIDRLTGEIATVARATLRDVAAVERNALRALGKRPSGRLAHLVGELAETAAGTRRLLEQTALRLAGIRTIPDRLVSLADPDARPIRKGK
PQHPTQFGYTALVAEDERGFVVDHKVQRGNPPDAPQLVPSVERVTTLTGRPPGTVVADRGFGFAANDQALTELGVQRIGLQRAGRPGKARREYERSRPFR
RMRNWRVGIEARISHLKRGFGFRRTRLRRLTGAQTWAGLGVFAYNLQRMTTLSR
HPTTLIKLVRRSGVQTAEQLNAALLGKLAEDKLLRCRKLRIDTTVIEADIDHPTDADLLEHGVRKLGRLVRRIKAAGAARRTSFRDRSRSAGRRLKEISR
TLRRRTGQALGEIDRLTGEIATVARATLRDVAAVERNALRALGKRPSGRLAHLVGELAETAAGTRRLLEQTALRLAGIRTIPDRLVSLADPDARPIRKGK
PQHPTQFGYTALVAEDERGFVVDHKVQRGNPPDAPQLVPSVERVTTLTGRPPGTVVADRGFGFAANDQALTELGVQRIGLQRAGRPGKARREYERSRPFR
RMRNWRVGIEARISHLKRGFGFRRTRLRRLTGAQTWAGLGVFAYNLQRMTTLSR
Blast result :
Comments
ISStsp10 is 95% aa similar to ISSna1.
References
1] ISfinder annotation (2016)
2] Du,Q., Wang,Q., Li,Q., Wang,L., Zhang,Z., Ren,J., Wang,J. and Wang,M. (2012) Direct submission GenBank.
2] Du,Q., Wang,Q., Li,Q., Wang,L., Zhang,Z., Ren,J., Wang,J. and Wang,M. (2012) Direct submission GenBank.