ISEae1
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Enterobacter aerogenes | Enterobacter aerogenes |
DNA section
IS Length : 1341 bp
Ends
IR Length : 13
IRL : GTGGTGTAAATTCGGAAGGATGGTGAGAGCCATCGGCTTATCCGGTAAGG
IRR : GTGGTGTAAATTCAGTTACAGCTTTCCGGTCCGGCAATGAGCCTGTTATG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
GTGGTGTAAATTCGGAAGGATGGTGAGAGCCATCGGCTTATCCGGTAAGGTAATGGTTAATCAGACAATTATCTTAGAAGGAGTCAACCGATGGCTGACA
ACAGCATGACATTCAGCAACACCCTGATGCAACTCGGCGGCGAGGATTTCCTGCGTGAGCTCACCGAATTTATGCTCAACCGCATCATGGAAGCCGACGT
CACTCAGCGCATCAACGCAGAGCCTCACGAGCGCAGCGATGAGCGCGAGACCTACCGCAACGGCTACCGTGACCGGCAGTACAACACCCGGCTCGGCACG
CTGGACCTGCGTATCCCGAAGCTGCGGGAAGGCACCTACTTCCCACCCTTTCTCGAGGCCCGCAGGCTGTCGGAGAAGGCGCTCAATGCGGTTATCCAGG
AAGCATGGATAAATGGCGTCTCCACCCGCAAGGTCGATGCGCTGGTCCAGTCGATGGGGATGACCGGTATCTCCCGCAGCCAGATGTCGTCCATCTGCCC
CGGTATCGATGAGCGCGTGCAGGCCTTCCTGCAGCGACCACTGGAAGGAGAATGGCCCTGTCTGTGGCTGGATGCGACCTATGTGAAGGTCCGCAAGAAC
GGTCGGGTGGTCAGCGTGGCGGTAATAATCGCCTGCGCGGTCAGCTCGGACGGTCGCCGGGAGATAATCGGGATGGGCATTGGTGAGTCAGAAGCCAAAG
CGTTCTGGCTTGCCTTCCTGCTGAGCCTGAAGGAGCGCGGTCTGGAAGGCGTGAAGCTGGTTATCTCCGACTCGCACAGCGGCCTGAAGGCGGCGATACG
GCAGGTGTTCTCTGCCAGCTGGCAGCGCTGCCGGGTCCACTTCATGCGCAACGTGCTGGGCCGGGTCAGCAGGGCCAGCCAGTCGGTGGTCCGCGCCGCT
CTGCAGCAGGTGTTCGTACAGACAGAGGAGAAGAGCGCTCATGCCACCTGGCGCGAGGTTGCGGCCCAACTGGAGAAAACCTTCCCGGCGGTTACGGAGA
TGATGGACGAAGCGGAAGAGGACGTGCTGGCGTACTTCGGCTTCCCGAAAGCGCACCGGGTGAAAATCCACTCGACCAACACGCTGGAGCGCCTGAACAA
AGAGGTGAAACGGCGTGCCGACGTAGTGGGCGTCTTCCCCAACGAAGACAGCATCATACGGCTTCTGGGTGCGGTCCTGACGGAGCAGAATGAAGAATGG
TTGCTGCAGAACCGCTACCTGCCGCAACACAGCATGGCGGAGACAGACCAGCTCGCTGAAACCGAAGTAATCGACGCGCTGCCAATCAGCGCATAACAGG
CTCATTGCCGGACCGGAAAGCTGTAACTGAATTTACACCAC
ACAGCATGACATTCAGCAACACCCTGATGCAACTCGGCGGCGAGGATTTCCTGCGTGAGCTCACCGAATTTATGCTCAACCGCATCATGGAAGCCGACGT
CACTCAGCGCATCAACGCAGAGCCTCACGAGCGCAGCGATGAGCGCGAGACCTACCGCAACGGCTACCGTGACCGGCAGTACAACACCCGGCTCGGCACG
CTGGACCTGCGTATCCCGAAGCTGCGGGAAGGCACCTACTTCCCACCCTTTCTCGAGGCCCGCAGGCTGTCGGAGAAGGCGCTCAATGCGGTTATCCAGG
AAGCATGGATAAATGGCGTCTCCACCCGCAAGGTCGATGCGCTGGTCCAGTCGATGGGGATGACCGGTATCTCCCGCAGCCAGATGTCGTCCATCTGCCC
CGGTATCGATGAGCGCGTGCAGGCCTTCCTGCAGCGACCACTGGAAGGAGAATGGCCCTGTCTGTGGCTGGATGCGACCTATGTGAAGGTCCGCAAGAAC
GGTCGGGTGGTCAGCGTGGCGGTAATAATCGCCTGCGCGGTCAGCTCGGACGGTCGCCGGGAGATAATCGGGATGGGCATTGGTGAGTCAGAAGCCAAAG
CGTTCTGGCTTGCCTTCCTGCTGAGCCTGAAGGAGCGCGGTCTGGAAGGCGTGAAGCTGGTTATCTCCGACTCGCACAGCGGCCTGAAGGCGGCGATACG
GCAGGTGTTCTCTGCCAGCTGGCAGCGCTGCCGGGTCCACTTCATGCGCAACGTGCTGGGCCGGGTCAGCAGGGCCAGCCAGTCGGTGGTCCGCGCCGCT
CTGCAGCAGGTGTTCGTACAGACAGAGGAGAAGAGCGCTCATGCCACCTGGCGCGAGGTTGCGGCCCAACTGGAGAAAACCTTCCCGGCGGTTACGGAGA
TGATGGACGAAGCGGAAGAGGACGTGCTGGCGTACTTCGGCTTCCCGAAAGCGCACCGGGTGAAAATCCACTCGACCAACACGCTGGAGCGCCTGAACAA
AGAGGTGAAACGGCGTGCCGACGTAGTGGGCGTCTTCCCCAACGAAGACAGCATCATACGGCTTCTGGGTGCGGTCCTGACGGAGCAGAATGAAGAATGG
TTGCTGCAGAACCGCTACCTGCCGCAACACAGCATGGCGGAGACAGACCAGCTCGCTGAAACCGAAGTAATCGACGCGCTGCCAATCAGCGCATAACAGG
CTCATTGCCGGACCGGAAAGCTGTAACTGAATTTACACCAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1206 bp | 401 aa | 91 | 1296 | + | No |
Chemistry : DDE
ORF sequence :
MADNSMTFSNTLMQLGGEDFLRELTEFMLNRIMEADVTQRINAEPHERSDERETYRNGYRDRQYNTRLGTLDLRIPKLREGTYFPPFLEARRLSEKALNA
VIQEAWINGVSTRKVDALVQSMGMTGISRSQMSSICPGIDERVQAFLQRPLEGEWPCLWLDATYVKVRKNGRVVSVAVIIACAVSSDGRREIIGMGIGES
EAKAFWLAFLLSLKERGLEGVKLVISDSHSGLKAAIRQVFSASWQRCRVHFMRNVLGRVSRASQSVVRAALQQVFVQTEEKSAHATWREVAAQLEKTFPA
VTEMMDEAEEDVLAYFGFPKAHRVKIHSTNTLERLNKEVKRRADVVGVFPNEDSIIRLLGAVLTEQNEEWLLQNRYLPQHSMAETDQLAETEVIDALPIS
A
VIQEAWINGVSTRKVDALVQSMGMTGISRSQMSSICPGIDERVQAFLQRPLEGEWPCLWLDATYVKVRKNGRVVSVAVIIACAVSSDGRREIIGMGIGES
EAKAFWLAFLLSLKERGLEGVKLVISDSHSGLKAAIRQVFSASWQRCRVHFMRNVLGRVSRASQSVVRAALQQVFVQTEEKSAHATWREVAAQLEKTFPA
VTEMMDEAEEDVLAYFGFPKAHRVKIHSTNTLERLNKEVKRRADVVGVFPNEDSIIRLLGAVLTEQNEEWLLQNRYLPQHSMAETDQLAETEVIDALPIS
A
Blast result :
Comments
ISEae1 is 75% aa similar to ISSpma2.
References
1] Boyd D. (2016) Direct submission to ISfinder