ISEae1

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Enterobacter aerogenes
Enterobacter aerogenes
DNA section
IS Length : 1341 bp

Ends


IR Length : 13

IRL : GTGGTGTAAATTCGGAAGGATGGTGAGAGCCATCGGCTTATCCGGTAAGG
IRR : GTGGTGTAAATTCAGTTACAGCTTTCCGGTCCGGCAATGAGCCTGTTATG

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

GTGGTGTAAATTCGGAAGGATGGTGAGAGCCATCGGCTTATCCGGTAAGGTAATGGTTAATCAGACAATTATCTTAGAAGGAGTCAACCGATGGCTGACA
ACAGCATGACATTCAGCAACACCCTGATGCAACTCGGCGGCGAGGATTTCCTGCGTGAGCTCACCGAATTTATGCTCAACCGCATCATGGAAGCCGACGT
CACTCAGCGCATCAACGCAGAGCCTCACGAGCGCAGCGATGAGCGCGAGACCTACCGCAACGGCTACCGTGACCGGCAGTACAACACCCGGCTCGGCACG
CTGGACCTGCGTATCCCGAAGCTGCGGGAAGGCACCTACTTCCCACCCTTTCTCGAGGCCCGCAGGCTGTCGGAGAAGGCGCTCAATGCGGTTATCCAGG
AAGCATGGATAAATGGCGTCTCCACCCGCAAGGTCGATGCGCTGGTCCAGTCGATGGGGATGACCGGTATCTCCCGCAGCCAGATGTCGTCCATCTGCCC
CGGTATCGATGAGCGCGTGCAGGCCTTCCTGCAGCGACCACTGGAAGGAGAATGGCCCTGTCTGTGGCTGGATGCGACCTATGTGAAGGTCCGCAAGAAC
GGTCGGGTGGTCAGCGTGGCGGTAATAATCGCCTGCGCGGTCAGCTCGGACGGTCGCCGGGAGATAATCGGGATGGGCATTGGTGAGTCAGAAGCCAAAG
CGTTCTGGCTTGCCTTCCTGCTGAGCCTGAAGGAGCGCGGTCTGGAAGGCGTGAAGCTGGTTATCTCCGACTCGCACAGCGGCCTGAAGGCGGCGATACG
GCAGGTGTTCTCTGCCAGCTGGCAGCGCTGCCGGGTCCACTTCATGCGCAACGTGCTGGGCCGGGTCAGCAGGGCCAGCCAGTCGGTGGTCCGCGCCGCT
CTGCAGCAGGTGTTCGTACAGACAGAGGAGAAGAGCGCTCATGCCACCTGGCGCGAGGTTGCGGCCCAACTGGAGAAAACCTTCCCGGCGGTTACGGAGA
TGATGGACGAAGCGGAAGAGGACGTGCTGGCGTACTTCGGCTTCCCGAAAGCGCACCGGGTGAAAATCCACTCGACCAACACGCTGGAGCGCCTGAACAA
AGAGGTGAAACGGCGTGCCGACGTAGTGGGCGTCTTCCCCAACGAAGACAGCATCATACGGCTTCTGGGTGCGGTCCTGACGGAGCAGAATGAAGAATGG
TTGCTGCAGAACCGCTACCTGCCGCAACACAGCATGGCGGAGACAGACCAGCTCGCTGAAACCGAAGTAATCGACGCGCTGCCAATCAGCGCATAACAGG
CTCATTGCCGGACCGGAAAGCTGTAACTGAATTTACACCAC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1206 bp401 aa911296+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MADNSMTFSNTLMQLGGEDFLRELTEFMLNRIMEADVTQRINAEPHERSDERETYRNGYRDRQYNTRLGTLDLRIPKLREGTYFPPFLEARRLSEKALNA
VIQEAWINGVSTRKVDALVQSMGMTGISRSQMSSICPGIDERVQAFLQRPLEGEWPCLWLDATYVKVRKNGRVVSVAVIIACAVSSDGRREIIGMGIGES
EAKAFWLAFLLSLKERGLEGVKLVISDSHSGLKAAIRQVFSASWQRCRVHFMRNVLGRVSRASQSVVRAALQQVFVQTEEKSAHATWREVAAQLEKTFPA
VTEMMDEAEEDVLAYFGFPKAHRVKIHSTNTLERLNKEVKRRADVVGVFPNEDSIIRLLGAVLTEQNEEWLLQNRYLPQHSMAETDQLAETEVIDALPIS
A

 

Blast result :
Comments
ISEae1 is 75% aa similar to ISSpma2.
References
1] Boyd D. (2016) Direct submission to ISfinder