ISGla1
- Family IS1595
- Group IS1595
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
BAEK01000042 | ND | Paraglaciecola agarilytica | Paraglaciecola agarilytica NO2 |
DNA section
IS Length : 1021 bp
Ends
IR Length : 20/24
IRL : CCTGATTACCCACAATCTTAATCCTCTTCTATACTGTATGAATGAACAGT
IRR : CCTGATTACCCATAAACATCATCCAGCTTTAACAGCCGGTATGGCATCGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GAGTATTTGACAATAGGTTA | AACCATTAAGACCTCTGGAT | 0 |
DNA sequence
CCTGATTACCCACAATCTTAATCCTCTTCTATACTGTATGAATGAACAGTTTATTGGGGAAGTATGTCATGTCAAAGAATCAAGTACAGCATCAGAAAGG
CTATAGCCTATTTGAGTTCATGGAAGACTACGGTAGTGAAGAGCAATGCAGACAGGCGGTATTCGCTTGGCGATTTCCAAATGGTTATGTTTGTAGAGAG
TGCGGACATAAAGGGTTTTGCGTTCTGAAAACACGTAACTTATTGCAGTGTAATCGGTGCAAGCATCAGCACTCACTGATCAGTGGTACCGTATTTTCCA
GTACCAAATTACCCCTGAAGACATGGTTTATGGCCATCCATTTATTGAGCCAGTCAAAGACAGGGTTATCGGCCATGGAGCTGAAGCGTCAGTTGGGTGT
CAACTACGATACTGCGTGGAAGATAAAGCACAAACTGCTTCAAGCGATGAGAGAAAGCGACGACAAACAGCCTATTGAAGGGATTATTCAGCTAGATGAT
GTGTACTGGGGAGGCGAGAGACGCGGGGGAAAGCGCGGTCGGGGCGCCGCAGGAAAGACTCCATTTGTAGCGGCCGTGGCACTCAATAAGGATGGTCATC
CGGTCAAGATGAAAATGAGCGTGGTTAAAGGATTTAGAAGCCAGTGCATCAAAAAATGGGCTAACCAGCATATTAAAGCTGGCAGTCTGGTAATCTCAGA
TGGCTTGCCCTGTTTCAGCGCCATCAATAAGACAAGTAGTGAGCAATTAGGGTTTATAGTCGGCGGGAAACTAGAGTTACTGGACCATCCGGCATTCAAG
TGGGTCAATGTGATGATAGGAAATGTTAAAAATTCACTGCGAGGCAGTTGTCACGCTGTGAAAGCGAATCACTTGCCACGACACTTGGCAGAGCATTGTT
TCAGATTTAACAATCGATTCGACCTTAGAACAATACTACCCAAGCTAGCTAAAGCCGCAGTGCAGACGTCAGCGATGCCATACCGGCTGTTAAAGCTGGA
TGATGTTTATGGGTAATCAGG
CTATAGCCTATTTGAGTTCATGGAAGACTACGGTAGTGAAGAGCAATGCAGACAGGCGGTATTCGCTTGGCGATTTCCAAATGGTTATGTTTGTAGAGAG
TGCGGACATAAAGGGTTTTGCGTTCTGAAAACACGTAACTTATTGCAGTGTAATCGGTGCAAGCATCAGCACTCACTGATCAGTGGTACCGTATTTTCCA
GTACCAAATTACCCCTGAAGACATGGTTTATGGCCATCCATTTATTGAGCCAGTCAAAGACAGGGTTATCGGCCATGGAGCTGAAGCGTCAGTTGGGTGT
CAACTACGATACTGCGTGGAAGATAAAGCACAAACTGCTTCAAGCGATGAGAGAAAGCGACGACAAACAGCCTATTGAAGGGATTATTCAGCTAGATGAT
GTGTACTGGGGAGGCGAGAGACGCGGGGGAAAGCGCGGTCGGGGCGCCGCAGGAAAGACTCCATTTGTAGCGGCCGTGGCACTCAATAAGGATGGTCATC
CGGTCAAGATGAAAATGAGCGTGGTTAAAGGATTTAGAAGCCAGTGCATCAAAAAATGGGCTAACCAGCATATTAAAGCTGGCAGTCTGGTAATCTCAGA
TGGCTTGCCCTGTTTCAGCGCCATCAATAAGACAAGTAGTGAGCAATTAGGGTTTATAGTCGGCGGGAAACTAGAGTTACTGGACCATCCGGCATTCAAG
TGGGTCAATGTGATGATAGGAAATGTTAAAAATTCACTGCGAGGCAGTTGTCACGCTGTGAAAGCGAATCACTTGCCACGACACTTGGCAGAGCATTGTT
TCAGATTTAACAATCGATTCGACCTTAGAACAATACTACCCAAGCTAGCTAAAGCCGCAGTGCAGACGTCAGCGATGCCATACCGGCTGTTAAAGCTGGA
TGATGTTTATGGGTAATCAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
948 bp | 315 aa | 69 | 1016 | + | No |
Chemistry : DDE
ORF sequence :
MSKNQVQHQKGYSLFEFMEDYGSEEQCRQAVFAWRFPNGYVCRECGHKGFCVLKTRNLLQCNRCKHQHSLISGTVFSSTKLPLKTWFMAIHLLSQSKTGL
SAMELKRQLGVNYDTAWKIKHKLLQAMRESDDKQPIEGIIQLDDVYWGGERRGGKRGRGAAGKTPFVAAVALNKDGHPVKMKMSVVKGFRSQCIKKWANQ
HIKAGSLVISDGLPCFSAINKTSSEQLGFIVGGKLELLDHPAFKWVNVMIGNVKNSLRGSCHAVKANHLPRHLAEHCFRFNNRFDLRTILPKLAKAAVQT
SAMPYRLLKLDDVYG
SAMELKRQLGVNYDTAWKIKHKLLQAMRESDDKQPIEGIIQLDDVYWGGERRGGKRGRGAAGKTPFVAAVALNKDGHPVKMKMSVVKGFRSQCIKKWANQ
HIKAGSLVISDGLPCFSAINKTSSEQLGFIVGGKLELLDHPAFKWVNVMIGNVKNSLRGSCHAVKANHLPRHLAEHCFRFNNRFDLRTILPKLAKAAVQT
SAMPYRLLKLDDVYG
Blast result :
Comments
ISGla1 is 81% aa similar to ISKpn3.
References