ISEcl5
- Family IS5
- Group IS5
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| KT290952 | ND | Enterobacter cloacae | Enterobacter cloacae 3-3 |
DNA section
IS Length : 1191 bp
Ends
IR Length : 16
IRL : GGAAACGCCGAATAAGTACCAAGAACAGTGAACGATTCTTTTGTCATGGG
IRR : GAAAACGCCGAACAAGCCATTGAAAAACTTGGTGGCGCTTCAAAATTGAG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TCAGAACGTT | CTAG | CGTGCCTTCT | 4 |
DNA sequence
GGAAACGCCGAATAAGTACCAAGAACAGTGAACGATTCTTTTGTCATGGGATCTGACTGTAGAAGCTGATCACCGGGACTGAAACGATGAAGCAAATGAC
GCTGGCGGCGAGCAGAGGATTCGAGAAGCACGGTCGGGCGACACGCAAGGCGGAGTTTCTGGCGCGCATGGAAGGACTGATGCCGTGGGCCGAATTCTGC
GCGTTGATCGAACCGCATTACCCGAAGGCGGGCAACGGTCGGCCACCGGTGGGAGTTGAGCGAATGTTGCGCATGTACTGCATTGCCAACTGGTTCAATC
TGAGCGACGTCGCCTGTGAGGATGCCCTGTACGATGTTCCGGTCTTCCGGGAGTTCTGTCGAATTGACCTGGGCCAAGAGCGCGTTCCGGATGCCACGAC
GCTGATGAACTTCCGTCACCTGCTGGAAGCCCATCAACTGGGGGCTGCGCTCTTCGCCAAAGTCGGCGAGTTGCTGATGGCCAACGGCATGAGGCTCTCC
GGCGGCACGATTGTCGATGCAACGCTGATTGCCGCGCCGCCCTCGACCAAGAATCAGCACAAAGCCCGTGACCCCGAGATGCATCAGACCAAGAAAGGCA
AGGATTGGCACTTCGGCATGAAGGTGCACATCGGCGCGGACAGCAAGACGGGATTGATCCATAGCGCCAGCGTCACGGCGGCCAACGTTCATGACAGCCA
CGAAGTCCCGAATCTGTTGCATGGGAACGAAACTCGGCTCTATGGCGACTGCGCCTACCGGGGCAAGGTGCAGCGGGAACGGCTCAGAGAACTCGCGCCG
AAGGCGAAAGACTTCACCCACAAGCGGGCCTACAAGAACCGCCCGCTGACCGAGGCCGACAAAGCAACGAACCGCCGCAAGTCCCGTGTCCGTTCCAAGG
TCGAGCATCCCTTCCTGACGCTCAAACGTCTCTGGGGTTTTACCAAGGTGCGTTATCGCGGTCTCGCCAAGAACGCCAACCGGGCCTTCGCCATGCTGGC
GATGATCAATCTCAACAAATGGGGCCGACCTCTGACAGGAAAGGTGCGTCCGGCATGAGCCGGATACGGGGAAATTCCCCGCATCCATGCCAAAAACCGG
CAACTTGGACGATGAAAAATCGATTTCTTTCGCCATTTCGGCTCAATTTTGAAGCGCCACCAAGTTTTTCAATGGCTTGTTCGGCGTTTTC
GCTGGCGGCGAGCAGAGGATTCGAGAAGCACGGTCGGGCGACACGCAAGGCGGAGTTTCTGGCGCGCATGGAAGGACTGATGCCGTGGGCCGAATTCTGC
GCGTTGATCGAACCGCATTACCCGAAGGCGGGCAACGGTCGGCCACCGGTGGGAGTTGAGCGAATGTTGCGCATGTACTGCATTGCCAACTGGTTCAATC
TGAGCGACGTCGCCTGTGAGGATGCCCTGTACGATGTTCCGGTCTTCCGGGAGTTCTGTCGAATTGACCTGGGCCAAGAGCGCGTTCCGGATGCCACGAC
GCTGATGAACTTCCGTCACCTGCTGGAAGCCCATCAACTGGGGGCTGCGCTCTTCGCCAAAGTCGGCGAGTTGCTGATGGCCAACGGCATGAGGCTCTCC
GGCGGCACGATTGTCGATGCAACGCTGATTGCCGCGCCGCCCTCGACCAAGAATCAGCACAAAGCCCGTGACCCCGAGATGCATCAGACCAAGAAAGGCA
AGGATTGGCACTTCGGCATGAAGGTGCACATCGGCGCGGACAGCAAGACGGGATTGATCCATAGCGCCAGCGTCACGGCGGCCAACGTTCATGACAGCCA
CGAAGTCCCGAATCTGTTGCATGGGAACGAAACTCGGCTCTATGGCGACTGCGCCTACCGGGGCAAGGTGCAGCGGGAACGGCTCAGAGAACTCGCGCCG
AAGGCGAAAGACTTCACCCACAAGCGGGCCTACAAGAACCGCCCGCTGACCGAGGCCGACAAAGCAACGAACCGCCGCAAGTCCCGTGTCCGTTCCAAGG
TCGAGCATCCCTTCCTGACGCTCAAACGTCTCTGGGGTTTTACCAAGGTGCGTTATCGCGGTCTCGCCAAGAACGCCAACCGGGCCTTCGCCATGCTGGC
GATGATCAATCTCAACAAATGGGGCCGACCTCTGACAGGAAAGGTGCGTCCGGCATGAGCCGGATACGGGGAAATTCCCCGCATCCATGCCAAAAACCGG
CAACTTGGACGATGAAAAATCGATTTCTTTCGCCATTTCGGCTCAATTTTGAAGCGCCACCAAGTTTTTCAATGGCTTGTTCGGCGTTTTC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 972 bp | 323 aa | 87 | 1058 | + | No |
Chemistry : DDE
ORF sequence :
MKQMTLAASRGFEKHGRATRKAEFLARMEGLMPWAEFCALIEPHYPKAGNGRPPVGVERMLRMYCIANWFNLSDVACEDALYDVPVFREFCRIDLGQERV
PDATTLMNFRHLLEAHQLGAALFAKVGELLMANGMRLSGGTIVDATLIAAPPSTKNQHKARDPEMHQTKKGKDWHFGMKVHIGADSKTGLIHSASVTAAN
VHDSHEVPNLLHGNETRLYGDCAYRGKVQRERLRELAPKAKDFTHKRAYKNRPLTEADKATNRRKSRVRSKVEHPFLTLKRLWGFTKVRYRGLAKNANRA
FAMLAMINLNKWGRPLTGKVRPA
PDATTLMNFRHLLEAHQLGAALFAKVGELLMANGMRLSGGTIVDATLIAAPPSTKNQHKARDPEMHQTKKGKDWHFGMKVHIGADSKTGLIHSASVTAAN
VHDSHEVPNLLHGNETRLYGDCAYRGKVQRERLRELAPKAKDFTHKRAYKNRPLTEADKATNRRKSRVRSKVEHPFLTLKRLWGFTKVRYRGLAKNANRA
FAMLAMINLNKWGRPLTGKVRPA
Blast result :
Comments
ISEcl5 is 73% aa similar to IS881.
References
1] Andreas Wendel (2015) Direct submission
2] Wendel,A.F. and MacKenzie,C.R. (2015) Direct submission GenBank.
2] Wendel,A.F. and MacKenzie,C.R. (2015) Direct submission GenBank.