ISAba36

  • Family IS1595
  • Group IS1016
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KU667287 ND Acinetobacter johnsonii
Acinetobacter baumannii
Acinetobacter johnsonii XBB1 plasmid pXBB1-8
DNA section
IS Length : 712 bp

Ends


IR Length :

IRL : GGGGCTGTAGTAGATTAGCAGAAGTGCTACTCTATGAAAATGAAGATAAA
IRR : GGGGCTGTAGTAGATAAGGTCAAATACCCGTCCAATCCAACAGTATTTCG

Insertion site


Left flankDirect repeatRight flankDR Length
ATGAATGAAATAATTTTATATTCAGTCA0
ATTAATGACATTAAATAATATTAAGGAG0

DNA sequence

GGGGCTGTAGTAGATTAGCAGAAGTGCTACTCTATGAAAATGAAGATAAATCGTTGTAAATTAGATAAAAACACCCAAAGAAAGCTTGTCGAGTTCTTTG
TTGCTGAGGTAACAGCTAGAACTGCGGCCAATTTGCTGGATATTCAGCCTAATACTGCTGCACTATTTTATAGAAAAATACGTGAAATAATCATGTACCA
CCTTGACCAAACTGCCGATGATATTTTTGAGGGAGAGGTTGAGTTAGATGAAAGCTACTTTGGTGGCACTCGTAAGGGAAAGCGTGGGCGTGGTGCTGGT
GGAAAAGTGGCTGTATTTGGTATACTAAAGCGCGGTGGTATGGTTTATGTCAAGGTTGTCCCTGATACCAAGTCTGATACATTAATGCCTGTTATTACAC
GTAAAGTAGCGCCTGATAGTGTGGTTTATACTGATAGCTATCGAAGCTACAATGTGCTTGATGTTAATTGTTTTTATCATGAGCGAATTAACCATTCTAA
AGATTTTGCAAAAGGTCGAAATCATATTAATGGTGTAGAAAATTTCTGGAATCAAGCTAAACGCATCCTAAGGAAGTACAATGGGATTGACCGAAATGCC
TTTCCATTGTTTATTAAAGAATGTGAGTTTAGATTTAACTATGGGAGTCCAAAACAACAGCTCGAAATACTGTTGGATTGGACGGGTATTTGACCTTATC
TACTACAGCCCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
660 bp219 aa34693+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKMKINRCKLDKNTQRKLVEFFVAEVTARTAANLLDIQPNTAALFYRKIREIIMYHLDQTADDIFEGEVELDESYFGGTRKGKRGRGAGGKVAVFGILKR
GGMVYVKVVPDTKSDTLMPVITRKVAPDSVVYTDSYRSYNVLDVNCFYHERINHSKDFAKGRNHINGVENFWNQAKRILRKYNGIDRNAFPLFIKECEFR
FNYGSPKQQLEILLDWTGI

 

Blast result :
Comments
References
1] E. Astashkin, I. Alexandrova, O. Ershova, A. Lev, E. Leonova, N. Fursova (2015) Direct submission.
2] Zong,Z. (2014) Direct submission GenBank.