ISEc61
- Family IS5
- Group IS1031
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP007558 | ND | Escherichia coli | Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKEC-dc3 Pantoea sp. PSNIH2 plasmid pPSP-100 Enterobacter cloacae ECNIH2 plasmid pKEC-39c Klebsiella oxytoca KONIH1 plasmid pKOX-86d Citrobacter freundii CFNIH1 plasmid pKEC-a3c Escherichia coli strain BK32533 plasmid pBK32533 |
DNA section
IS Length : 954 bp
Ends
IR Length : 19/26
IRL : GAGCCCGATCCGAAATTAAGTTGAGTGGTGTCAGCGTGTTAGCTTGACGC
IRR : GAGTCTGATTCGAAATTATCCTGTGTAATTTGATAATCTTGCGATTCGTC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ATTTGCCTTA | TTAACAACTC | 0 | |
CCGTCGCTTA | TAAGAGAAGC | 0 |
DNA sequence
GAGCCCGATCCGAAATTAAGTTGAGTGGTGTCAGCGTGTTAGCTTGACGCTGTGCCCGATCATTGATTCAGCGGTTTTGCAACGAACCGAGGGAAATCAA
CGATGTGGACCGACACCACTCGCGCGCATCATGCCCGCGCGGGGCTGGCTTTGCCAAGCGATTTGACCGATGCCGAATGGGCGGTGCTGGAGCCATTCTT
TCCGCCGCCGTCGCGTGTCGGCCGTCCGCGCAAATGGCCGATACGGCGGATTGTCGAGGCGATCCTCTACCTGTTGCGCGGCGGGCTGCCGTGGCGGATG
CTGCCGCCGTGCTTTCCGCCGGTCTCGACGGTGCGGCGCTGGTTCTACCTGTGGCGCGACAACGGGCTATGGCGAGGTCTCAACCATGACCTGCTGATGA
CCGCGCGCGAAGCCCATGGCCGCGAGGCTTCGCCCAGTGCCGGGGTGATCGACAGTCAGAGCGTCAAAACCACCGAATCCGGCGGGCCGCGCGGCTATGA
CGCGGGCAAGAAGATCAAGGGCCGCAAGCGCCATATCCTGACCGATACCGAGGGCAACCTGGTTCATGCCGTGGTCCATACGGCCGATATCCAGGATCGC
GATGGAGCGCCGCTGGTGCTGGCCGGGATCGTCAACCGCTTCCCATGGCTGCGCCACCTGTTCGCCGACGGCGGCTATGCCGGTGACAAGCTCAGGGACG
CGCTCCGCAAGATCGGCACGTGGACGCTCGATATCGTCAAGCGCTCCAACAAGACCAAAGGCTTCCAGGTGCTGCCCCGCCGCTGGGTCGTCGAGCGCAC
CCTCGCATGGCTCAGCCGGAACCGGCGCCTTGCCAAGGACTTCGAGCAGACCATCGCATCGGCCACCGCATGGCTCTTCATCGCCTCCATCCAACTCTTC
ACGAGACGAATCGCAAGATTATCAAATTACACAGGATAATTTCGAATCAGACTC
CGATGTGGACCGACACCACTCGCGCGCATCATGCCCGCGCGGGGCTGGCTTTGCCAAGCGATTTGACCGATGCCGAATGGGCGGTGCTGGAGCCATTCTT
TCCGCCGCCGTCGCGTGTCGGCCGTCCGCGCAAATGGCCGATACGGCGGATTGTCGAGGCGATCCTCTACCTGTTGCGCGGCGGGCTGCCGTGGCGGATG
CTGCCGCCGTGCTTTCCGCCGGTCTCGACGGTGCGGCGCTGGTTCTACCTGTGGCGCGACAACGGGCTATGGCGAGGTCTCAACCATGACCTGCTGATGA
CCGCGCGCGAAGCCCATGGCCGCGAGGCTTCGCCCAGTGCCGGGGTGATCGACAGTCAGAGCGTCAAAACCACCGAATCCGGCGGGCCGCGCGGCTATGA
CGCGGGCAAGAAGATCAAGGGCCGCAAGCGCCATATCCTGACCGATACCGAGGGCAACCTGGTTCATGCCGTGGTCCATACGGCCGATATCCAGGATCGC
GATGGAGCGCCGCTGGTGCTGGCCGGGATCGTCAACCGCTTCCCATGGCTGCGCCACCTGTTCGCCGACGGCGGCTATGCCGGTGACAAGCTCAGGGACG
CGCTCCGCAAGATCGGCACGTGGACGCTCGATATCGTCAAGCGCTCCAACAAGACCAAAGGCTTCCAGGTGCTGCCCCGCCGCTGGGTCGTCGAGCGCAC
CCTCGCATGGCTCAGCCGGAACCGGCGCCTTGCCAAGGACTTCGAGCAGACCATCGCATCGGCCACCGCATGGCTCTTCATCGCCTCCATCCAACTCTTC
ACGAGACGAATCGCAAGATTATCAAATTACACAGGATAATTTCGAATCAGACTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
837 bp | 278 aa | 103 | 939 | + | No |
Chemistry : DDE
ORF sequence :
MWTDTTRAHHARAGLALPSDLTDAEWAVLEPFFPPPSRVGRPRKWPIRRIVEAILYLLRGGLPWRMLPPCFPPVSTVRRWFYLWRDNGLWRGLNHDLLMT
AREAHGREASPSAGVIDSQSVKTTESGGPRGYDAGKKIKGRKRHILTDTEGNLVHAVVHTADIQDRDGAPLVLAGIVNRFPWLRHLFADGGYAGDKLRDA
LRKIGTWTLDIVKRSNKTKGFQVLPRRWVVERTLAWLSRNRRLAKDFEQTIASATAWLFIASIQLFTRRIARLSNYTG
AREAHGREASPSAGVIDSQSVKTTESGGPRGYDAGKKIKGRKRHILTDTEGNLVHAVVHTADIQDRDGAPLVLAGIVNRFPWLRHLFADGGYAGDKLRDA
LRKIGTWTLDIVKRSNKTKGFQVLPRRWVVERTLAWLSRNRRLAKDFEQTIASATAWLFIASIQLFTRRIARLSNYTG
Blast result :
Comments
ISEc61 is 90% aa similar to ISAzs28.
References
1] He S. (2015) Direct submission
2] Segre,J.A. and Mullikin,J. (2014) Direct submission to GenBank
2] Segre,J.A. and Mullikin,J. (2014) Direct submission to GenBank