ISEc61

  • Family IS5
  • Group IS1031
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP007558 ND Escherichia coli
Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKEC-dc3
Pantoea sp. PSNIH2 plasmid pPSP-100
Enterobacter cloacae ECNIH2 plasmid pKEC-39c
Klebsiella oxytoca KONIH1 plasmid pKOX-86d
Citrobacter freundii CFNIH1 plasmid pKEC-a3c
Escherichia coli strain BK32533 plasmid pBK32533
DNA section
IS Length : 954 bp

Ends


IR Length : 19/26

IRL : GAGCCCGATCCGAAATTAAGTTGAGTGGTGTCAGCGTGTTAGCTTGACGC
IRR : GAGTCTGATTCGAAATTATCCTGTGTAATTTGATAATCTTGCGATTCGTC

Insertion site


Left flankDirect repeatRight flankDR Length
ATTTGCCTTATTAACAACTC0
CCGTCGCTTATAAGAGAAGC0

DNA sequence

GAGCCCGATCCGAAATTAAGTTGAGTGGTGTCAGCGTGTTAGCTTGACGCTGTGCCCGATCATTGATTCAGCGGTTTTGCAACGAACCGAGGGAAATCAA
CGATGTGGACCGACACCACTCGCGCGCATCATGCCCGCGCGGGGCTGGCTTTGCCAAGCGATTTGACCGATGCCGAATGGGCGGTGCTGGAGCCATTCTT
TCCGCCGCCGTCGCGTGTCGGCCGTCCGCGCAAATGGCCGATACGGCGGATTGTCGAGGCGATCCTCTACCTGTTGCGCGGCGGGCTGCCGTGGCGGATG
CTGCCGCCGTGCTTTCCGCCGGTCTCGACGGTGCGGCGCTGGTTCTACCTGTGGCGCGACAACGGGCTATGGCGAGGTCTCAACCATGACCTGCTGATGA
CCGCGCGCGAAGCCCATGGCCGCGAGGCTTCGCCCAGTGCCGGGGTGATCGACAGTCAGAGCGTCAAAACCACCGAATCCGGCGGGCCGCGCGGCTATGA
CGCGGGCAAGAAGATCAAGGGCCGCAAGCGCCATATCCTGACCGATACCGAGGGCAACCTGGTTCATGCCGTGGTCCATACGGCCGATATCCAGGATCGC
GATGGAGCGCCGCTGGTGCTGGCCGGGATCGTCAACCGCTTCCCATGGCTGCGCCACCTGTTCGCCGACGGCGGCTATGCCGGTGACAAGCTCAGGGACG
CGCTCCGCAAGATCGGCACGTGGACGCTCGATATCGTCAAGCGCTCCAACAAGACCAAAGGCTTCCAGGTGCTGCCCCGCCGCTGGGTCGTCGAGCGCAC
CCTCGCATGGCTCAGCCGGAACCGGCGCCTTGCCAAGGACTTCGAGCAGACCATCGCATCGGCCACCGCATGGCTCTTCATCGCCTCCATCCAACTCTTC
ACGAGACGAATCGCAAGATTATCAAATTACACAGGATAATTTCGAATCAGACTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
837 bp278 aa103939+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MWTDTTRAHHARAGLALPSDLTDAEWAVLEPFFPPPSRVGRPRKWPIRRIVEAILYLLRGGLPWRMLPPCFPPVSTVRRWFYLWRDNGLWRGLNHDLLMT
AREAHGREASPSAGVIDSQSVKTTESGGPRGYDAGKKIKGRKRHILTDTEGNLVHAVVHTADIQDRDGAPLVLAGIVNRFPWLRHLFADGGYAGDKLRDA
LRKIGTWTLDIVKRSNKTKGFQVLPRRWVVERTLAWLSRNRRLAKDFEQTIASATAWLFIASIQLFTRRIARLSNYTG

 

Blast result :
Comments
ISEc61 is 90% aa similar to ISAzs28.
References
1] He S. (2015) Direct submission
2] Segre,J.A. and Mullikin,J. (2014) Direct submission to GenBank