ISAve2

  • Family IS5
  • Group IS903
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP002607 ND Aeromonas veronii
Aeromonas veronii B565
DNA section
IS Length : 1062 bp

Ends


IR Length : 18/20

IRL : GGCGTTGTTTCCCAAATCAGAGTGACCTGAATTGAACTTATGGTGGAGAC
IRR : GGCGCTGTTGCCCAAATCAGCCATTATGCCACAACTTCCCTAGCCCCAGG

Insertion site


Left flankDirect repeatRight flankDR Length
TCAACTAGCGTGTATCACTTGCC3

DNA sequence

GGCGTTGTTTCCCAAATCAGAGTGACCTGAATTGAACTTATGGTGGAGACGGCGATCTGATCACCAAATCCCTCTTCAAGTCTGCATCATGGGCACGCCG
CTTCAACCCATCACCAACTGGCCAACATACAACAAGTCTTTGATTAATCGTGGTTCACTCACCTTCTGGGTTGATGCCGAGGCCATGAGCAACTGGTTTC
ACCACGACCATCATGGGCGGCGGGGGCGCAGCCAGCTCTACACCGACCAGAGCATCTGTACCTTTCTGATGCTCAAAGGGATTTTCAACCTCTCCCTGTG
GGCGACACAGGGCCTGTTCGACTCGCTGCTTGAGCTGATGAATGTGCCGCTGTGTGCCCCCGACTACAGCTGTGTCAGCAAGCGCGCCAGTACCGTGAAG
GTGGCATACCGCCAGCCACCCAAGAGCAAGGTTACCGATTTGGTTATCGATTCCACCGGCTTGAAAGTGTTTGGCGAGGGTGAATGGAAGGTCAGAAAGC
ATGGCCATGACAAGCGCCAGGTCTGGCGCAAATTGCATCTGGCGGTAGACCCGGCGACCTACGACATCGTGGCAGCCGAGGCTTCGTTGGAAAATGTTCA
TGATGCCGAGGTGTTGCCGACCCTGTTCAATCCGCTACGCCGAGCCCTTGGGACCGTGTATGCCGATGGCGCATATGACACCAAGACCTGCCATGAACTG
ATAAAGCGCAAAGGAGCCAAGGCTTGTATTCCGCCGCGCAAGAATGCCGGTTTATGGGAAGAGGGGCATCCACGTAATGAAGCGGTTCTGGTGATGCGCA
AGGAGGGACTGACTCACTGGAAGCAGCAGTCCGGGTATCATCGCCGCTCACTGGCCGAGACGGCGATGTATCGGTTCAAGCAGTTGCTGGCGGGAAAAAT
CAGTCTGCGTAACTACAACGGCCAAGTGGGAGAAGTCATGGCGTATGTCAGCGCCATAAATAAACTGAATGCCCTTGGTCTGCCGGTTAGAAAGCCCCAA
GTGTAGCTGTCACCTGGGGCTAGGGAAGTTGTGGCATAATGGCTGATTTGGGCAACAGCGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
918 bp305 aa891006+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MGTPLQPITNWPTYNKSLINRGSLTFWVDAEAMSNWFHHDHHGRRGRSQLYTDQSICTFLMLKGIFNLSLWATQGLFDSLLELMNVPLCAPDYSCVSKRA
STVKVAYRQPPKSKVTDLVIDSTGLKVFGEGEWKVRKHGHDKRQVWRKLHLAVDPATYDIVAAEASLENVHDAEVLPTLFNPLRRALGTVYADGAYDTKT
CHELIKRKGAKACIPPRKNAGLWEEGHPRNEAVLVMRKEGLTHWKQQSGYHRRSLAETAMYRFKQLLAGKISLRNYNGQVGEVMAYVSAINKLNALGLPV
RKPQV

 

Blast result :
Comments
ISAve2 is 93% aa similar to ISAs15.
References
1] Pfeiffer F. (2015) Direct submission
2] Li Y., Liu Y., Zhou Z., Huang H., Ren Y., Zhang Y., Li G., Zhou Z. and Wang,L. (2011) J. Bacteriol. 193 (13), 3389-3390