ISAeme25
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Aeromonas media | Aeromonas media |
DNA section
IS Length : 1385 bp
Ends
IR Length : 20/26
IRL : GAGTTATGGTGATTTCTGGTGTATGGGGGATATAGAGAAGGTGGCGTATC
IRR : GAGCTATTGTCAAATGTGGTGTATGGAGTAGGTCAGGCGGCATTCCTGTC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GAGAGTTTTG | CAAGGCAAG | AGCAGGATGC | 9 |
DNA sequence
GAGTTATGGTGATTTCTGGTGTATGGGGGATATAGAGAAGGTGGCGTATCCTGCTGATTGATTCCGCTCAAAGAATTCAATCAACAGAGGTGATACGCCA
TGACCGATTCTACCCTCAGAGCCCTGCCACAACCAGAGGCCAAGTCAACAGATCCGCTCACAGACCTGCTGCGTGCAGGAGCCAGAGACCTGATTGCCCA
GGCTGTGGAAGCAGAGCTTCAAACCCTGCTTGAGCGCCACGCTCAGCTTAAGCTCCCCGATGGCCGCCAAGCGTTGGTACGCAACGGCTTTTTGCCTGAA
CGCACCATCCAGACCGGGATCGGCGATGTCGAGATCAAGGTGCCAAAGGTGCGCGACAGAAGTGGTTCAGGGATCTGCTTCAACAGTTCGCTGCTGCCGC
CCTATCTCAAGCGTTCCAGCAGCATAGAAGAGCTGCTGCCCTGGCTGTACCTGCGGGGGATTTCCACTGGAGATTATCAGGAGGCGCTGGGCGCGTTGCT
CGGTGACAAGGCCAAGGGGTTGTCGGCCAATACCATCAGCCGCCTGAAACAGCACTGGGGTGATGAGCATCGGGAGTGGAGCCAGCGGGACCTGAGCCAG
AAGCGGTATGTGTACTTTTGGGCTGATGGGATATACAGCAACGTGCGCATGGGAGACCGGCTTTGCTTGCTGGTTATCATTGGCGTAACGGAGCATGGCC
ATAAGGAACTGGTGGCGGTCGAGGATGGCCTGAGGGAGTCTGAGACCAGCTGGACAGAGCTCCTGATGGGGCTGCGAGCCAGAGGGCTGGGCAAGGGCCC
CAAGCTTGCCGTCGGTGATGGCGCCCTGGGTTTTTGGCGAGCGCTGGCCAAGTGCTACCCGGATACGGTCCATCAACGATGTTGGGTTCACAAGACCGCG
AACGTGCTGGCAGCGTTGCCCAAATCTGTGCATCTCAAGGTCAAGGATGCGCTGCATGAAATCTGGATGGCCGAGACAAGGGATGAGGCTCACATGGCGT
TTGACCGCATTTTGGTGCGCTTTGAAGCGAAGTACCCGAAGGCGATGGAGAAGCTGACGAAAGACCGGGAAGAGCTGCTGGCGTTCTATGATTTTCCGGC
CGAGCACTGGGTGCATATCCGGACGACGAACCCGATAGAGTCGACGTTTTCGACGGTCAGGCTACGAAGCAAGAGAGCGCGGAACTGTGGGTCTCGGGAG
ACCACGCTGGCGATGGTTTACAAGCTGCTTGAAGCGGCACAGAAGAAGTGGAAGCGGCTCAAGGGATTTGTGCTGCTGACGTTGGTGGTAAACAACGTGA
AATTCAAGGACGGAGTCCAGGTGCTGGATGAGTCAGACAGGAATGCCGCCTGACCTACTCCATACACCACATTTGACAATAGCTC
TGACCGATTCTACCCTCAGAGCCCTGCCACAACCAGAGGCCAAGTCAACAGATCCGCTCACAGACCTGCTGCGTGCAGGAGCCAGAGACCTGATTGCCCA
GGCTGTGGAAGCAGAGCTTCAAACCCTGCTTGAGCGCCACGCTCAGCTTAAGCTCCCCGATGGCCGCCAAGCGTTGGTACGCAACGGCTTTTTGCCTGAA
CGCACCATCCAGACCGGGATCGGCGATGTCGAGATCAAGGTGCCAAAGGTGCGCGACAGAAGTGGTTCAGGGATCTGCTTCAACAGTTCGCTGCTGCCGC
CCTATCTCAAGCGTTCCAGCAGCATAGAAGAGCTGCTGCCCTGGCTGTACCTGCGGGGGATTTCCACTGGAGATTATCAGGAGGCGCTGGGCGCGTTGCT
CGGTGACAAGGCCAAGGGGTTGTCGGCCAATACCATCAGCCGCCTGAAACAGCACTGGGGTGATGAGCATCGGGAGTGGAGCCAGCGGGACCTGAGCCAG
AAGCGGTATGTGTACTTTTGGGCTGATGGGATATACAGCAACGTGCGCATGGGAGACCGGCTTTGCTTGCTGGTTATCATTGGCGTAACGGAGCATGGCC
ATAAGGAACTGGTGGCGGTCGAGGATGGCCTGAGGGAGTCTGAGACCAGCTGGACAGAGCTCCTGATGGGGCTGCGAGCCAGAGGGCTGGGCAAGGGCCC
CAAGCTTGCCGTCGGTGATGGCGCCCTGGGTTTTTGGCGAGCGCTGGCCAAGTGCTACCCGGATACGGTCCATCAACGATGTTGGGTTCACAAGACCGCG
AACGTGCTGGCAGCGTTGCCCAAATCTGTGCATCTCAAGGTCAAGGATGCGCTGCATGAAATCTGGATGGCCGAGACAAGGGATGAGGCTCACATGGCGT
TTGACCGCATTTTGGTGCGCTTTGAAGCGAAGTACCCGAAGGCGATGGAGAAGCTGACGAAAGACCGGGAAGAGCTGCTGGCGTTCTATGATTTTCCGGC
CGAGCACTGGGTGCATATCCGGACGACGAACCCGATAGAGTCGACGTTTTCGACGGTCAGGCTACGAAGCAAGAGAGCGCGGAACTGTGGGTCTCGGGAG
ACCACGCTGGCGATGGTTTACAAGCTGCTTGAAGCGGCACAGAAGAAGTGGAAGCGGCTCAAGGGATTTGTGCTGCTGACGTTGGTGGTAAACAACGTGA
AATTCAAGGACGGAGTCCAGGTGCTGGATGAGTCAGACAGGAATGCCGCCTGACCTACTCCATACACCACATTTGACAATAGCTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1254 bp | 417 aa | 100 | 1353 | + | No |
Chemistry : DDE
ORF sequence :
MTDSTLRALPQPEAKSTDPLTDLLRAGARDLIAQAVEAELQTLLERHAQLKLPDGRQALVRNGFLPERTIQTGIGDVEIKVPKVRDRSGSGICFNSSLLP
PYLKRSSSIEELLPWLYLRGISTGDYQEALGALLGDKAKGLSANTISRLKQHWGDEHREWSQRDLSQKRYVYFWADGIYSNVRMGDRLCLLVIIGVTEHG
HKELVAVEDGLRESETSWTELLMGLRARGLGKGPKLAVGDGALGFWRALAKCYPDTVHQRCWVHKTANVLAALPKSVHLKVKDALHEIWMAETRDEAHMA
FDRILVRFEAKYPKAMEKLTKDREELLAFYDFPAEHWVHIRTTNPIESTFSTVRLRSKRARNCGSRETTLAMVYKLLEAAQKKWKRLKGFVLLTLVVNNV
KFKDGVQVLDESDRNAA
PYLKRSSSIEELLPWLYLRGISTGDYQEALGALLGDKAKGLSANTISRLKQHWGDEHREWSQRDLSQKRYVYFWADGIYSNVRMGDRLCLLVIIGVTEHG
HKELVAVEDGLRESETSWTELLMGLRARGLGKGPKLAVGDGALGFWRALAKCYPDTVHQRCWVHKTANVLAALPKSVHLKVKDALHEIWMAETRDEAHMA
FDRILVRFEAKYPKAMEKLTKDREELLAFYDFPAEHWVHIRTTNPIESTFSTVRLRSKRARNCGSRETTLAMVYKLLEAAQKKWKRLKGFVLLTLVVNNV
KFKDGVQVLDESDRNAA
Blast result :
Comments
ISAeme25 is 84% aa similar to ISTdr1.
References
1] Pfeiffer F. (2015) Direct submission