ISAeca3

  • Family IS110
  • Group IS1111
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Aeromonas caviae
Aeromonas caviae
DNA section
IS Length : 1340 bp

Ends


IR Length : 12

IRL : taatgagATGGTCACCCCCACCCTGTGAGCGGTACGCTGACAGGGTGTTT
IRR : ----tctATGGTCACCCCCTTTTTTGCAACCTTGATTTCGGGTGTTGTGG

Insertion site


Left flankDirect repeatRight flankDR Length
GTGCGGGGTCTTGTTTTGGG0

DNA sequence

TAATGAGATGGTCACCCCCACCCTGTGAGCGGTACGCTGACAGGGTGTTTTTCTTTCAGGAGAGGCCATCATGGAAAACGTTGCGCTTATTGGTATTGAT
CTCGGTAAACACTCTTTTCACATTCACTGTCAAGACCGGTTCGGCAAGGCTCTTCTTCGCAAGAAGTTCAACCGGACAAAGCTCATCGAATCCCTCGCAA
CTTTTCCTGTATGCACCATCGTCATGGAGGCATGTGCCGGAGCCCATTACATGGCTCGTCGGCTGGCTGAATTTGGGCATGAGAGTAAGCTCATTTCGCC
TCAATTCGTGCGCCCATTCGTCAAGAGCAACAAGAACGACTTCATCGATGCTGAAGCTATTTGCGAGGCCGCCTGCCGTCCCTCCATGCGGTTTGTAACG
CCCAAGACCGAAAGCCAGCAAACGTTGGGAGCACTGCATCGTGTGCGCGAATCGTTTGTGCGCGATCGGGTTAAGGCATCGAACCAGATACACGGCTTTT
TACTCGAATTTGGCATCAGTCTGCCCGTCGGTCATGCCGCCATCAAGCGCCTGCCTTCTGTGATGGCTGAACACGAGTTACCAGCGCGACTGATTACCAT
GTTGGAGAGGCTGCATGCCCATTTCAAGTATCTGGAGCAGCAAATTGCCGAGATCGACAAGGAACTGGCCAGCCAGCTTGGCGATGACGATCTTGGTCAG
CGTCTGATGACAATCCCTGGTGTCGGCCCGATCACTGCCAGCGTGTTGGCCGCCGAGCTCGGTGACGGAAAACACTATCGATGTAGTCGTGATTTCGCGG
CGTCAGTCGGATTGGTGCCACGCCAGTACAGTACTGGGGGCCGGGCAAACCTGAAGGGTATCAGCAAGCGTGGCGACAAAAATCTTAGACGATTGTTGGT
GCAATGTGCACGAGCCTATATGCAACGGCTAGAGCGGCAAACGGGACGATTGGCTGATTGGGTCAGGTCTATGTTGACTCGGCGACATTCGAATGTTGTG
GCTTGTGCACTAGCCAACAAGTTGGCCCGCACGGCTTGGGCGCTGGCGGCACGGCATACCGAATTTCGGGCAATGCCAACCTGACGCGCCCCTATTTACT
TTTGTACTGACACACCCACCTGGTTTTGCGACTGTGATATTGGATGACGTGAACGGCATACCGGCCTGACTGATAACCTGGCAAAAGAATAGGCTTTCTA
GGCCGAGGGTCTTTTTAGGACAGTCAGGCGCGATTCTCATCGTGACGCGGAGAACATTCTCCATCAAGACGCCGGATAGATTTAAGCAAGCCAACCACAA
CACCCGAAATCAAGGTTGCAAAAAAGGGGGTGACCATAGA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1014 bp337 aa711084+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MENVALIGIDLGKHSFHIHCQDRFGKALLRKKFNRTKLIESLATFPVCTIVMEACAGAHYMARRLAEFGHESKLISPQFVRPFVKSNKNDFIDAEAICEA
ACRPSMRFVTPKTESQQTLGALHRVRESFVRDRVKASNQIHGFLLEFGISLPVGHAAIKRLPSVMAEHELPARLITMLERLHAHFKYLEQQIAEIDKELA
SQLGDDDLGQRLMTIPGVGPITASVLAAELGDGKHYRCSRDFAASVGLVPRQYSTGGRANLKGISKRGDKNLRRLLVQCARAYMQRLERQTGRLADWVRS
MLTRRHSNVVACALANKLARTAWALAARHTEFRAMPT

 

Blast result :
Comments
ISAeca3 is 87% aa similar to ISBcen1.
References
1] Pfeiffer F. (2015) Direct submission