ISAeme10

  • Family IS1595
  • Group ISPna2
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Aeromonas media
Aeromonas media WS
DNA section
IS Length : 1032 bp

Ends


IR Length : 22/28

IRL : GGCGCTGTCCCAGTTATGTGTTGAAAGGCTAACCTTGAAGTAGGTCATCA
IRR : GGCTATGTCCCAATTACGTGTTGCATGGGGCGCCCCAGCGCCTCCTGCAA

Insertion site


Left flankDirect repeatRight flankDR Length
CGAGCCTCTCCTTTTGTTTGCCATCGCAC9

DNA sequence

GGCGCTGTCCCAGTTATGTGTTGAAAGGCTAACCTTGAAGTAGGTCATCACCCTGAGGGCCTCCATCATGGATACCCAAGCCTTTCAACATCTACTCTCT
CTCTTCCCACTGCTCACCTTGCGCCAGCGTCGTCTCGCGCAACATGAACTCGCCGCCCCTCACCCCATCACCTCGTTAGCCACCCAACTCCCCCCTTGCC
AATGTTGCCCTCACTGCCAGGCCGAGGCCGCGCAGTTGGCTCCCTGGGGCTGGAGTCGAGGACTGCGTCGCTATCGCTGCAAGCAGTGTCTGCGCACCAG
TTCCGTTCTCACCAAGACGCCGCTGGCCCGACTTCGCAAGGCACAGTGCTGGGAAGACTATGCCCAGGCCCTCATCGACGGGCTGACCGTCCGACAGGCT
GCCGTCCGCTGCGGAGTCTGTAAAAACACCGCCTTTTTGTGGCGTCACCGCTTCCTGAAAGCCATGGCGAGCCACCAGGCGGTACGGGAAGAGGGTATCG
TCGAGGTCGATGAGACCTTCTTCCTGGAGTCGTTTAAAGGGCAACGTGGTTTGCCCCGCCCGGCCCGCCATCGTGGGGGCAAAGGCCGTACCCGAGGCAC
AGGGTCGGATTACATCCCGGTGATGGTGGTTCAGGACCGGGCTGGCCACCATGCGGATTTTCAGTTGGAGAAAATGAATGCCGAGACGGTGATAGCGGTT
TTGGCACCCCTTGTCTCGCCAGATGCGGTGTTGTGTAGCGATGGCGCCGGGGTGTATGCCAGTTTCAGCAAAGCGCAGGGAGTGACCCATCAGGTCGTGC
GTAATCGTCAAGGCGAGCGCGTGGTTGGCGCCTACCACATCCAGCATGTGAACGGGTACCACAGGCGGTTGAAAGAGTGGATGGAGCGGTTCCATGGGGT
AGCGACCCACTATCTGAGGAATTATCTGGGTTGGCGAAGGATGCTGGAGCGCTATGGACGGGAAGTGACTATCCCACATTGCTTGCAGGAGGCGCTGGGG
CGCCCCATGCAACACGTAATTGGGACATAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
963 bp320 aa681030+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MDTQAFQHLLSLFPLLTLRQRRLAQHELAAPHPITSLATQLPPCQCCPHCQAEAAQLAPWGWSRGLRRYRCKQCLRTSSVLTKTPLARLRKAQCWEDYAQ
ALIDGLTVRQAAVRCGVCKNTAFLWRHRFLKAMASHQAVREEGIVEVDETFFLESFKGQRGLPRPARHRGGKGRTRGTGSDYIPVMVVQDRAGHHADFQL
EKMNAETVIAVLAPLVSPDAVLCSDGAGVYASFSKAQGVTHQVVRNRQGERVVGAYHIQHVNGYHRRLKEWMERFHGVATHYLRNYLGWRRMLERYGREV
TIPHCLQEALGRPMQHVIGT

 

Blast result :
Comments
ISAeme10 is 93% aa similar to ISAhy1.
References
1] Pfeiffer F. (2015) Direct submission