ISAba31

  • Family IS5
  • Group IS427
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
LN611376 ND Acinetobacter baumannii
Acinetobacter radioresistence NIPH 2130
Acinetobacter baumannii 4031
Acinetobacter baumannii A074
Acinetobacter spp.
Acinetobacter baumannii AB030
Acinetobacter sp. CIP 64.7
Acinetobacter lwoffii NIPH 512
DNA section
IS Length : 858 bp

Ends


IR Length : 15/16

IRL : GGGTGTGTTGACACTTTTAGCTTAAAAAAATAGCGAAGTAGTAAAATCAA
IRR : GGGTCTGTTGACACTTACTGTTCATAATTAACCCTATAAAGGTAGCCATA

Insertion site


Left flankDirect repeatRight flankDR Length
AAACTCTTTTAATTTAACAT2

DNA sequence

GGGTGTGTTGACACTTTTAGCTTAAAAAAATAGCGAAGTAGTAAAATCAAATCACCAAACCCAATTTTACTATTCGCTATGCCTCGTACCATGCTGACAG
ATCAACACTGGCAAAAGTTGAAAGTTATTCTGCGTAATTTATCCATTCACCACAACTCAAATTTACGCAATTTTATTGAAGCTATTCTCTATAGAATTAG
AACAGGCTGTCCGTGGCGAGATATTCCTTCTTGTTTTGGTCATTCCAACTCTATTTTCAAACGTTTTAATCGTTGGTCAAGCAGCGGTAAGTTACTTAGA
TTATTCAAATTACTAGCCTCATGCCCCGATATGGAGTGGATTTTTATTGATGGCTCTCATGTACGTGCTCATCAACATTCTGCCGGCATAGCGAATCAAT
CTATTTCTAAAAGTGTAGGAGGAAACTCCTCAAAAATACATTTGATTGTTGATGCACATGGCAATCCTATTGATTTCATGATTACCGATGGAACCACACA
TGATGTTAAAGTTGCGCCTGATTTAATATCAACATTAGATTTAAAAGAGACAAAAGTGGTATGCGCAGATAAAGGCTATGATTCAGAACCACTGCGTGAA
CAGATCAGGAAAACAGGGACTAAAGCGAATATACCAAAGAAAACGAATAGCCAATCGAACAATGACCATATGGACTGGTATTTATATAAAATCAGGCATT
TAGTTGAAAATATGTTTTGTAGATTAAAGCAATTTAGAGGAATAGCTACTCGATATGACAAGCTCAAAAGAAATTATCAAAGTTCTGTTGCCTTAGCCTG
TATATTTTTATGGCTACCTTTATAGGGTTAATTATGAACAGTAAGTGTCAACAGACCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
747 bp248 aa79825+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MPRTMLTDQHWQKLKVILRNLSIHHNSNLRNFIEAILYRIRTGCPWRDIPSCFGHSNSIFKRFNRWSSSGKLLRLFKLLASCPDMEWIFIDGSHVRAHQH
SAGIANQSISKSVGGNSSKIHLIVDAHGNPIDFMITDGTTHDVKVAPDLISTLDLKETKVVCADKGYDSEPLREQIRKTGTKANIPKKTNSQSNNDHMDW
YLYKIRHLVENMFCRLKQFRGIATRYDKLKRNYQSSVALACIFLWLPL

 

Blast result :
Comments
ISAba31 is 70% aa similar to ISSpu10.
References
1] Nabil Karah, (2015) Direct submission