ISAha3
- Family IS5
- Group IS903
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| LN611576 | ND | Acinetobacter haemolyticus | Acinetobacter haemolyticus 69122-EW plasmid pNDM-69122 |
DNA section
IS Length : 1039 bp
Ends
IR Length : 15/16
IRL : GGCTTTGTTGCACAAAGCTATTCTTGAAGGCTTCTTCAGTAATATAATTT
IRR : GGCTTTGTTGCATAAACATTCAAAAGCTGAGTTCTCCCCAATCCATTCAA
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TAATTTCCAG | TTAGGTGATA | 0 | |
| AGTAAAGGAC | GTCGGGATCG | 0 |
DNA sequence
GGCTTTGTTGCACAAAGCTATTCTTGAAGGCTTCTTCAGTAATATAATTTCCAGATGAAGAAGCCTACACCTAAAATCTATCGTACAACCAATTGGTCCT
CGTATAACCAAGCTTTAATCAAGCGAGGAAATATTTCAATCTGGTTTGATCCTAAGACGCAATGGTATGCACAACCACAAGGCAAGCAAGGACGAAATCA
AACTTATTCCGATACAGCGATTCAATGCTGTTTAATGATCAAATCTCTATTCCGTCTTTCTTTACGTATGGTTACTGGCTTTGTTCAAAGCCTGATTAAA
CTCTGTGGCTTGAATTGGACAGCACCAGATTACTCCACCCTTTGTAGACGACAAAAGCATATTGATATTGCGATAAGCTATCAGAAAAGTCATGATGGGT
TACACCTACTTGTCGACTCTACGGGTTTAAAGTTTTTAGGTGAAGGCGAATGGAAGCGTAAAAAACATCAGCCTGAATACCGTCGGCAATGGCGTAAACT
GCATATTGGTATAGATGCTGAAACACTGCAAATACGTGCCGTTCAGCTTACTACAAATAATGTCAGTGATTCACAAGTACTAGGTGATTTACTGGATCAA
ATTCCACTAGATGAGCGAATAGATTCTGTCTATACCGATGGCGCGTACGACACGAAGTGCTGCAGAAAAGTGATTTCAGATCGTCAAGCACATGCAGTAA
TTCCACCCAGAAAGAATGCCAAGCCCTGGAAAGATTCTAAAATAAGTTCAATAGAACGAAATGAGTTACTTCAAACGGTTAAACATTTAGGTAGAACCCT
ATGGAAAAAATGGTCGGGTTATCACCGTCGTAGTTTGGTGGAAACCAAGATGCATTGCATCAAATTATTAGGTGATAGGCTGACGGCAAGACATTTTCAA
AGTCAGGTCAATGAAATTCATGCGCGTGTGGCAGTTCTGAATAGATTTACGGAATTAGGTAGACCTCGCACCCAAGTTGTGTCTTAAATTTGAATGGATT
GGGGAGAACTCAGCTTTTGAATGTTTATGCAACAAAGCC
CGTATAACCAAGCTTTAATCAAGCGAGGAAATATTTCAATCTGGTTTGATCCTAAGACGCAATGGTATGCACAACCACAAGGCAAGCAAGGACGAAATCA
AACTTATTCCGATACAGCGATTCAATGCTGTTTAATGATCAAATCTCTATTCCGTCTTTCTTTACGTATGGTTACTGGCTTTGTTCAAAGCCTGATTAAA
CTCTGTGGCTTGAATTGGACAGCACCAGATTACTCCACCCTTTGTAGACGACAAAAGCATATTGATATTGCGATAAGCTATCAGAAAAGTCATGATGGGT
TACACCTACTTGTCGACTCTACGGGTTTAAAGTTTTTAGGTGAAGGCGAATGGAAGCGTAAAAAACATCAGCCTGAATACCGTCGGCAATGGCGTAAACT
GCATATTGGTATAGATGCTGAAACACTGCAAATACGTGCCGTTCAGCTTACTACAAATAATGTCAGTGATTCACAAGTACTAGGTGATTTACTGGATCAA
ATTCCACTAGATGAGCGAATAGATTCTGTCTATACCGATGGCGCGTACGACACGAAGTGCTGCAGAAAAGTGATTTCAGATCGTCAAGCACATGCAGTAA
TTCCACCCAGAAAGAATGCCAAGCCCTGGAAAGATTCTAAAATAAGTTCAATAGAACGAAATGAGTTACTTCAAACGGTTAAACATTTAGGTAGAACCCT
ATGGAAAAAATGGTCGGGTTATCACCGTCGTAGTTTGGTGGAAACCAAGATGCATTGCATCAAATTATTAGGTGATAGGCTGACGGCAAGACATTTTCAA
AGTCAGGTCAATGAAATTCATGCGCGTGTGGCAGTTCTGAATAGATTTACGGAATTAGGTAGACCTCGCACCCAAGTTGTGTCTTAAATTTGAATGGATT
GGGGAGAACTCAGCTTTTGAATGTTTATGCAACAAAGCC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 933 bp | 310 aa | 55 | 987 | + | No |
Chemistry : DDE
ORF sequence :
MKKPTPKIYRTTNWSSYNQALIKRGNISIWFDPKTQWYAQPQGKQGRNQTYSDTAIQCCLMIKSLFRLSLRMVTGFVQSLIKLCGLNWTAPDYSTLCRRQ
KHIDIAISYQKSHDGLHLLVDSTGLKFLGEGEWKRKKHQPEYRRQWRKLHIGIDAETLQIRAVQLTTNNVSDSQVLGDLLDQIPLDERIDSVYTDGAYDT
KCCRKVISDRQAHAVIPPRKNAKPWKDSKISSIERNELLQTVKHLGRTLWKKWSGYHRRSLVETKMHCIKLLGDRLTARHFQSQVNEIHARVAVLNRFTE
LGRPRTQVVS
KHIDIAISYQKSHDGLHLLVDSTGLKFLGEGEWKRKKHQPEYRRQWRKLHIGIDAETLQIRAVQLTTNNVSDSQVLGDLLDQIPLDERIDSVYTDGAYDT
KCCRKVISDRQAHAVIPPRKNAKPWKDSKISSIERNELLQTVKHLGRTLWKKWSGYHRRSLVETKMHCIKLLGDRLTARHFQSQVNEIHARVAVLNRFTE
LGRPRTQVVS
Blast result :
Comments
ISAha3 is 95% aa similar to ISAlw1.
References
1] Jones, L.S., Carvalho, M.J., Toleman, M.A., White, P.L., Connor, T.R., Mushtaq, A., Weeks, J.L., Kumarasamy, K.K., Raven, K.E., Török, M.E., Peacock, S.J., Howe, R.A. and Walsh, T.R. Characterisation of plasmids in extensively drug-resistant (XDR) Acinetobacter species from India and Pakistan. Submitted for publication awaiting final decision.