ISGob7
- Family ISKra4
- Group ISKra4
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_ABGO01000338.1 | ND | Gemmata obscuriglobus | Gemmata obscuriglobus UQM 2246 |
DNA section
IS Length : 1463 bp
Ends
IR Length : 22
IRL : GGGTGCCCCTCTGGATTTTGGCATTTGTGAACGGTATGGGAGCCGGCTGG
IRR : GGGTGCCCCTCTGGATTTTGGCCCGTTATTGGTTTTCCCAAAACCCCTTC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCGGGGTCCG | CAGGGCTAC | AGGGCTACTC | 9 |
GTTGACAGCAATCTTACGCG | GTACGAGAGTTTGCCGGCGA | 0 | |
AAGGTGAAATAAGGAAAGGC | AGGAAAGACCCTAGGGCTTA | 0 | |
TCGAGCGTAG | TTTATGCTG | TCGGGCAGGT | 9 |
AATCAGCGGA | ACGGCCCCA | CGGGCGCGCG | 9 |
DNA sequence
GGGTGCCCCTCTGGATTTTGGCATTTGTGAACGGTATGGGAGCCGGCTGGGGAAGCCGTGGCAATCTGGGAGGGATACTGATGCCGACGCTGACTATAGA
ATACAGTACCGAATCCGAACGGTTGGCCTTGGAACAACTGCTGGGCTATTTCACGGACCTGAATCGTCTGGCCCAAGAAGCTCCCGACGGCACGGTCCTG
GCCGCCTGCGAGAAGCATGCACTCGATCAAGGGCGCAAACTGTTGCGGACCACACTCGGTGCCGCCTTGGGTTCACGGATCGAGAAGGACGAGCAAAAAG
GGGGCGCGCCCGCACCTGCGCGAAGACGCACCCCGGGCGCTCCAAAGGACCGCACACCCGAACGGTTGTGACCGCCGTTGGTCCGATTGAGCTGGAGCGG
AGGTATTTCCACTGCCCCACTTGCGGGCAAGGCGAGTTCGGAGCCGATCGCGGGCTGGGCCTCAGCGGCTACGTCACCCCGGGCGCCTGTCGGATGGCCG
TCTTGCTGGGCGTCCAACAGTCCTTCGCCAAAGCCGAAGTGACTCTGGCCGAGGTGGTCGGCTGGGAATTGGACGACAACACCATCCGGCAACTCTGCCA
CGCCACGGCGGCCCAGGCCACCGCCACCCGGCAACACCGCTCGACCGCTGAAGTCTTCACCCGAGCCCAAGCCGCGGCCAGGACCGAGCGGCCGGTGGAC
AGCGAGTTGCACATCGACGCGGGCAAGGTCAACACTGTGGAGGACGGTTGGCGGGATCTCAAGATGGCCGTTTTTGCCCGGCGCGAGCGAAGTGCGCCGA
CCACGGCGATGGACTGGGAGGGACGCGACCTGCCAACCCCGTTGGCGCGGTCGGTGATCGCGGCCGTGGAGGAGGCGAGCCTGTTCGGGAAGCGGTGTCA
CGACGAGGCCACGCGACTGGAGTGGACCGATTCGAGCCAAATGACGGTACTGGGGGATGGGGCCGAGTGGTTGTGGAACGTGTCCGAGCAGCACTTCCGT
GACGCGACCCAGGTCCTCGACTTCTGGCATGGGGCGGAGTACCTCGCCAGCGGGGCGAAGGCGGTGTTCGGTCCCGGGGGCCAAGCCGCGACGGCGTTTG
TCCGGGGCAAGTCGAAGCTGCTGGAAGACGGATATCCCGGGTTGGTGGACTGGATCGGAGAACTGACCGGGCAGATGCCCGCCGGAGGCGACGGAGCCGC
CTTGGGCGGCGTATTGAATTACTTTTGTGGCCAACAGGGGCGGTTGAATTATGCGGTGCGTTTGCGGCGGGGGCAGTCGATTGGAAGCGGGTTGGTGGAG
GGAACGGTTAAGCAATTGCTCAACATCAGAATGAAACAAACTGGGGCGAGATGGAATCTGGGGCATGTGGCACCGTTTGTCGAACTGGGGGCATTAGCAG
CGGGGCCGGAGTGGAAGGGGTTTTGGGAAAACCAATAACGGGCCAAAATCCAGAGGGGCACCC
ATACAGTACCGAATCCGAACGGTTGGCCTTGGAACAACTGCTGGGCTATTTCACGGACCTGAATCGTCTGGCCCAAGAAGCTCCCGACGGCACGGTCCTG
GCCGCCTGCGAGAAGCATGCACTCGATCAAGGGCGCAAACTGTTGCGGACCACACTCGGTGCCGCCTTGGGTTCACGGATCGAGAAGGACGAGCAAAAAG
GGGGCGCGCCCGCACCTGCGCGAAGACGCACCCCGGGCGCTCCAAAGGACCGCACACCCGAACGGTTGTGACCGCCGTTGGTCCGATTGAGCTGGAGCGG
AGGTATTTCCACTGCCCCACTTGCGGGCAAGGCGAGTTCGGAGCCGATCGCGGGCTGGGCCTCAGCGGCTACGTCACCCCGGGCGCCTGTCGGATGGCCG
TCTTGCTGGGCGTCCAACAGTCCTTCGCCAAAGCCGAAGTGACTCTGGCCGAGGTGGTCGGCTGGGAATTGGACGACAACACCATCCGGCAACTCTGCCA
CGCCACGGCGGCCCAGGCCACCGCCACCCGGCAACACCGCTCGACCGCTGAAGTCTTCACCCGAGCCCAAGCCGCGGCCAGGACCGAGCGGCCGGTGGAC
AGCGAGTTGCACATCGACGCGGGCAAGGTCAACACTGTGGAGGACGGTTGGCGGGATCTCAAGATGGCCGTTTTTGCCCGGCGCGAGCGAAGTGCGCCGA
CCACGGCGATGGACTGGGAGGGACGCGACCTGCCAACCCCGTTGGCGCGGTCGGTGATCGCGGCCGTGGAGGAGGCGAGCCTGTTCGGGAAGCGGTGTCA
CGACGAGGCCACGCGACTGGAGTGGACCGATTCGAGCCAAATGACGGTACTGGGGGATGGGGCCGAGTGGTTGTGGAACGTGTCCGAGCAGCACTTCCGT
GACGCGACCCAGGTCCTCGACTTCTGGCATGGGGCGGAGTACCTCGCCAGCGGGGCGAAGGCGGTGTTCGGTCCCGGGGGCCAAGCCGCGACGGCGTTTG
TCCGGGGCAAGTCGAAGCTGCTGGAAGACGGATATCCCGGGTTGGTGGACTGGATCGGAGAACTGACCGGGCAGATGCCCGCCGGAGGCGACGGAGCCGC
CTTGGGCGGCGTATTGAATTACTTTTGTGGCCAACAGGGGCGGTTGAATTATGCGGTGCGTTTGCGGCGGGGGCAGTCGATTGGAAGCGGGTTGGTGGAG
GGAACGGTTAAGCAATTGCTCAACATCAGAATGAAACAAACTGGGGCGAGATGGAATCTGGGGCATGTGGCACCGTTTGTCGAACTGGGGGCATTAGCAG
CGGGGCCGGAGTGGAAGGGGTTTTGGGAAAACCAATAACGGGCCAAAATCCAGAGGGGCACCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1071 bp | 356 aa | 368 | 1438 | + | No |
Chemistry : DDE
ORF sequence :
MTAVGPIELERRYFHCPTCGQGEFGADRGLGLSGYVTPGACRMAVLLGVQQSFAKAEVTLAEVVGWELDDNTIRQLCHATAAQATATRQHRSTAEVFTRA
QAAARTERPVDSELHIDAGKVNTVEDGWRDLKMAVFARRERSAPTTAMDWEGRDLPTPLARSVIAAVEEASLFGKRCHDEATRLEWTDSSQMTVLGDGAE
WLWNVSEQHFRDATQVLDFWHGAEYLASGAKAVFGPGGQAATAFVRGKSKLLEDGYPGLVDWIGELTGQMPAGGDGAALGGVLNYFCGQQGRLNYAVRLR
RGQSIGSGLVEGTVKQLLNIRMKQTGARWNLGHVAPFVELGALAAGPEWKGFWENQ
QAAARTERPVDSELHIDAGKVNTVEDGWRDLKMAVFARRERSAPTTAMDWEGRDLPTPLARSVIAAVEEASLFGKRCHDEATRLEWTDSSQMTVLGDGAE
WLWNVSEQHFRDATQVLDFWHGAEYLASGAKAVFGPGGQAATAFVRGKSKLLEDGYPGLVDWIGELTGQMPAGGDGAALGGVLNYFCGQQGRLNYAVRLR
RGQSIGSGLVEGTVKQLLNIRMKQTGARWNLGHVAPFVELGALAAGPEWKGFWENQ
Blast result :
Comments
ISGob7 is 41% aa similar to ISAzba1.
References