ISGob7

  • Family ISKra4
  • Group ISKra4
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_ABGO01000338.1 ND Gemmata obscuriglobus
Gemmata obscuriglobus UQM 2246
DNA section
IS Length : 1463 bp

Ends


IR Length : 22

IRL : GGGTGCCCCTCTGGATTTTGGCATTTGTGAACGGTATGGGAGCCGGCTGG
IRR : GGGTGCCCCTCTGGATTTTGGCCCGTTATTGGTTTTCCCAAAACCCCTTC

Insertion site


Left flankDirect repeatRight flankDR Length
TCGGGGTCCGCAGGGCTACAGGGCTACTC9
GTTGACAGCAATCTTACGCGGTACGAGAGTTTGCCGGCGA0
AAGGTGAAATAAGGAAAGGCAGGAAAGACCCTAGGGCTTA0
TCGAGCGTAGTTTATGCTGTCGGGCAGGT9
AATCAGCGGAACGGCCCCACGGGCGCGCG9

DNA sequence

GGGTGCCCCTCTGGATTTTGGCATTTGTGAACGGTATGGGAGCCGGCTGGGGAAGCCGTGGCAATCTGGGAGGGATACTGATGCCGACGCTGACTATAGA
ATACAGTACCGAATCCGAACGGTTGGCCTTGGAACAACTGCTGGGCTATTTCACGGACCTGAATCGTCTGGCCCAAGAAGCTCCCGACGGCACGGTCCTG
GCCGCCTGCGAGAAGCATGCACTCGATCAAGGGCGCAAACTGTTGCGGACCACACTCGGTGCCGCCTTGGGTTCACGGATCGAGAAGGACGAGCAAAAAG
GGGGCGCGCCCGCACCTGCGCGAAGACGCACCCCGGGCGCTCCAAAGGACCGCACACCCGAACGGTTGTGACCGCCGTTGGTCCGATTGAGCTGGAGCGG
AGGTATTTCCACTGCCCCACTTGCGGGCAAGGCGAGTTCGGAGCCGATCGCGGGCTGGGCCTCAGCGGCTACGTCACCCCGGGCGCCTGTCGGATGGCCG
TCTTGCTGGGCGTCCAACAGTCCTTCGCCAAAGCCGAAGTGACTCTGGCCGAGGTGGTCGGCTGGGAATTGGACGACAACACCATCCGGCAACTCTGCCA
CGCCACGGCGGCCCAGGCCACCGCCACCCGGCAACACCGCTCGACCGCTGAAGTCTTCACCCGAGCCCAAGCCGCGGCCAGGACCGAGCGGCCGGTGGAC
AGCGAGTTGCACATCGACGCGGGCAAGGTCAACACTGTGGAGGACGGTTGGCGGGATCTCAAGATGGCCGTTTTTGCCCGGCGCGAGCGAAGTGCGCCGA
CCACGGCGATGGACTGGGAGGGACGCGACCTGCCAACCCCGTTGGCGCGGTCGGTGATCGCGGCCGTGGAGGAGGCGAGCCTGTTCGGGAAGCGGTGTCA
CGACGAGGCCACGCGACTGGAGTGGACCGATTCGAGCCAAATGACGGTACTGGGGGATGGGGCCGAGTGGTTGTGGAACGTGTCCGAGCAGCACTTCCGT
GACGCGACCCAGGTCCTCGACTTCTGGCATGGGGCGGAGTACCTCGCCAGCGGGGCGAAGGCGGTGTTCGGTCCCGGGGGCCAAGCCGCGACGGCGTTTG
TCCGGGGCAAGTCGAAGCTGCTGGAAGACGGATATCCCGGGTTGGTGGACTGGATCGGAGAACTGACCGGGCAGATGCCCGCCGGAGGCGACGGAGCCGC
CTTGGGCGGCGTATTGAATTACTTTTGTGGCCAACAGGGGCGGTTGAATTATGCGGTGCGTTTGCGGCGGGGGCAGTCGATTGGAAGCGGGTTGGTGGAG
GGAACGGTTAAGCAATTGCTCAACATCAGAATGAAACAAACTGGGGCGAGATGGAATCTGGGGCATGTGGCACCGTTTGTCGAACTGGGGGCATTAGCAG
CGGGGCCGGAGTGGAAGGGGTTTTGGGAAAACCAATAACGGGCCAAAATCCAGAGGGGCACCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1071 bp356 aa3681438+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MTAVGPIELERRYFHCPTCGQGEFGADRGLGLSGYVTPGACRMAVLLGVQQSFAKAEVTLAEVVGWELDDNTIRQLCHATAAQATATRQHRSTAEVFTRA
QAAARTERPVDSELHIDAGKVNTVEDGWRDLKMAVFARRERSAPTTAMDWEGRDLPTPLARSVIAAVEEASLFGKRCHDEATRLEWTDSSQMTVLGDGAE
WLWNVSEQHFRDATQVLDFWHGAEYLASGAKAVFGPGGQAATAFVRGKSKLLEDGYPGLVDWIGELTGQMPAGGDGAALGGVLNYFCGQQGRLNYAVRLR
RGQSIGSGLVEGTVKQLLNIRMKQTGARWNLGHVAPFVELGALAAGPEWKGFWENQ

 

Blast result :
Comments
ISGob7 is 41% aa similar to ISAzba1.
References