ISEc51
- Family ISKra4
- Group ISAzba1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AEME01000001.1 | ND | Escherichia sp. | Escherichia sp. TW09308 |
DNA section
IS Length : 2857 bp
Ends
IR Length : 24/26
IRL : GAGGGCATGAAAAACCCTGGGGCAGTCACTGAATGAGGGACCAGCAGCGG
IRR : GAGAGCATGAAAAACCTTGGGGCAGTAGCTATGCTGCCATAGCGGATAAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCTGCTTGCCACAGGAAG | CTCGTTCAACTCAAT | 0 |
DNA sequence
GAGGGCATGAAAAACCCTGGGGCAGTCACTGAATGAGGGACCAGCAGCGGTAAAATAACCGGCATAATTTTATAATGATGCCTCCGTTAGTTATGAAGGT
TTACGTCATTAAAATTGCTGTTCGTGGTGTCAGTCCTATGGTCTGGCGTCGGCTGAGGATTGCAGCCGATACATCACTGGCTGCACTTCATTTTATTATC
CAGATCATTCAGGGCTGGGGTGATGACCACCTGCACCAGTTTCATATTTACGGTAAAGATTACGGTATCACTTACGAGGGGGGAATTGGTTTTCCAGATA
ACCCGTTCCAGGTTGTGATTGATGATTTTGAGTTTGATGTCGGCGATCGCTTTACTTATGAATACAATTTCTTTGAGCACTGGATTCATGATATTCGCGT
TGAAGCCATTTATGAAAACACCGAGCTGAAAACGCCATTTTGTATAAGTGGTCATGGTATGCCCGGAGCCACAGTTGCAGATGAGTTTGATAAAACCCTG
GCGTTTCTTGAAGCTATCGTTAATGCAGATGATGAAACAACGATTGGTGAGATTCGCCCTTTTGCTGACGACCTGGACGCTGTCCGGTTTAACCGCAACA
AAATCAACCGGCGGCTAAGCAAACTCAACCTTGCCTCTCCAGCGCTGGAGCCTGAGGTAATTTAGCTGGGGCGTCGTCGCTGACTGCTTCTATAAAGGTA
TACGTTTTCAATATGTCCTTCAGTTACCCGGAAAAATATCTATAAACCTCCATAAATCGGTGTTTATGAATTATTCTTTAAATCTCTATAATGTTTAAAG
ACATTCCGGAGGTTTCACATGCAATATGCCTACATCAGGGTGAGCTCAGCCGACCAGAATACAGCACGTCAGGAAGAGGCATTGTTAAAGGCGGGTTTTC
AGCCAGATAAAATTTATGTTGAACATGCCAGTGCTAAGGATACAAACCGACCGGAGTTGCAGAAGCTCCTTGAGCAACTGCGCCCGGGAGATACGCTTCT
TGTCCATTCCATCGATCGCCTTTGTCGGAATATGATGGATATGTGTGCTGTAACAACCAGGCTTCGGGAGATGGGCGTTACCCTTATTTTTCTGAAGGAA
CAGCTTACGTTCAATGCAGGAATAAGCAATCCAATGCAGGAGTTACAGTTGCACATGATGTCTGCATTCAGTCAGTTTGAACGTGCTTTACTGAAAGAAA
GGCAGGCTGACGGTATTGCAGCGAAAAAAGCGCGGGGAGAAAAAACAGGGCGTCCCTGCGCAGATATCAAAAAAGTTCAGGAAATTGATGAGCTCAGAAG
TCGTGGAGTCAGACTCAGGATCGCCTGCGACCATGCTGGTCTCGGCGTTTCAACATATTATAAGCTTCGCAACCAGATGAAAAACCAGTAACCAGGAGAT
AATCTCACCACCGCCGGAGGCAATAATGAAACTGATATTTCAGATAGTTATAACCGATGAATCAGGCTCCAGTCGAACGGAAGAACTGATGAACCTGCAG
AAATCAGGAGATGCCCTGAATGATATCGGATTATCAGTTTCAGAATCGAAGCAGTTGTTGGGGGCAGTCCAGAAGTCGCTGGTTCAGCAACAGGCTGACG
AATATATTCACCAGAATATCCGATGTCCTCACTGCCTTACGAAGCGCAGAATCAAAGGCCAACAAAAAATCCAATACCGGACGTTGTTTGGCGTTATTCC
TGTATCAGGGCTTCGGGTGTATCGGTGCCGCTGTGAAGAAAGTGCAACAAAAACAGTCAGTCTGCTCAGTGACTGGGCTGGAGATCACACTCACCCTGCA
CTGAAATATATAGAAACCCGCTGGGCCTCTTTGATCTCGTATGAAATGACGGTTCGTTTACTAAAAGATGTCCTGCCGGTAGGGTACAGTCTGAATGCCT
CAACAGTGAGGAATCATTTATGCCGTGTGGCACAGCGTCTTGATTCTGAGGCAGAATCACATTCCGGCTTTATTTCAGGTTGCCCCCGCGACTGGGGAAA
CCTGCCAAAACCGGGAAAACCTCTGGTGGTGGGTATTGATGGCGGTTATGTCCGCGATCGGGATAACAAGAAACGTAATTTTGAAATTATTGCCGGTAAA
TCATTTTCAATCGGAGCACCGGCCGACGCACGTCGCTTTGGTTTTGTCCAGAAGAGCGACTGTCATCCGGAACGTCGGCTCATGGCACACCTCTCTGCTC
AGGGAATGCAGGCTAACCAGCAGATATTCTTTTTATCCGACGGCGCGGATAATCTGAGAGAACTGCAGTTCGGTATGTACCCTGAGTCAATTCATGTGCT
TGACTGGTTTCATATAACGATGAGGCTGACGGTGTTAATGCAATATGCAAAGGGGTTGCAGGCATCAGAGCCAGCGACGGGCAGTAAGGTGTTATCGCTT
CTGGAAAGCAGTAAACGATATCTCTGGCACGGTAATGTTGCCACTGCACTGGATCGCATTGACGATTGCGTTATGTATTGTGATGACCCTGAACTCAACT
ATGTAAACCTGAAAGCCCTGCAAAAACAGCTGGATGAGATGTATACCTACATCCGTAATAATCAGATGATGATCCCAAACTACGGAGAAATGTGCCGGTA
TGGTGAGCCGGTTTCAACAGCGTTTGTCGAGTCAACAATCAACGAAGTGATCGCCCGACGAATGGCCAAAAAGCAGCAGATGCAGTGGAGTAGAAAGGGC
GCGCATTATTTGTTACAGACCAGAACTGCAGTCCTGAATAACGAACTACGGGACAAATTCGCCAGTTGGTATCCCGGTTGTACGATAGACGCTCAGAGTA
GAGGGACGTTATCCGCTATGGCAGCATAGCTACTGCCCCAAGGTTTTTCATGCTCTC
TTACGTCATTAAAATTGCTGTTCGTGGTGTCAGTCCTATGGTCTGGCGTCGGCTGAGGATTGCAGCCGATACATCACTGGCTGCACTTCATTTTATTATC
CAGATCATTCAGGGCTGGGGTGATGACCACCTGCACCAGTTTCATATTTACGGTAAAGATTACGGTATCACTTACGAGGGGGGAATTGGTTTTCCAGATA
ACCCGTTCCAGGTTGTGATTGATGATTTTGAGTTTGATGTCGGCGATCGCTTTACTTATGAATACAATTTCTTTGAGCACTGGATTCATGATATTCGCGT
TGAAGCCATTTATGAAAACACCGAGCTGAAAACGCCATTTTGTATAAGTGGTCATGGTATGCCCGGAGCCACAGTTGCAGATGAGTTTGATAAAACCCTG
GCGTTTCTTGAAGCTATCGTTAATGCAGATGATGAAACAACGATTGGTGAGATTCGCCCTTTTGCTGACGACCTGGACGCTGTCCGGTTTAACCGCAACA
AAATCAACCGGCGGCTAAGCAAACTCAACCTTGCCTCTCCAGCGCTGGAGCCTGAGGTAATTTAGCTGGGGCGTCGTCGCTGACTGCTTCTATAAAGGTA
TACGTTTTCAATATGTCCTTCAGTTACCCGGAAAAATATCTATAAACCTCCATAAATCGGTGTTTATGAATTATTCTTTAAATCTCTATAATGTTTAAAG
ACATTCCGGAGGTTTCACATGCAATATGCCTACATCAGGGTGAGCTCAGCCGACCAGAATACAGCACGTCAGGAAGAGGCATTGTTAAAGGCGGGTTTTC
AGCCAGATAAAATTTATGTTGAACATGCCAGTGCTAAGGATACAAACCGACCGGAGTTGCAGAAGCTCCTTGAGCAACTGCGCCCGGGAGATACGCTTCT
TGTCCATTCCATCGATCGCCTTTGTCGGAATATGATGGATATGTGTGCTGTAACAACCAGGCTTCGGGAGATGGGCGTTACCCTTATTTTTCTGAAGGAA
CAGCTTACGTTCAATGCAGGAATAAGCAATCCAATGCAGGAGTTACAGTTGCACATGATGTCTGCATTCAGTCAGTTTGAACGTGCTTTACTGAAAGAAA
GGCAGGCTGACGGTATTGCAGCGAAAAAAGCGCGGGGAGAAAAAACAGGGCGTCCCTGCGCAGATATCAAAAAAGTTCAGGAAATTGATGAGCTCAGAAG
TCGTGGAGTCAGACTCAGGATCGCCTGCGACCATGCTGGTCTCGGCGTTTCAACATATTATAAGCTTCGCAACCAGATGAAAAACCAGTAACCAGGAGAT
AATCTCACCACCGCCGGAGGCAATAATGAAACTGATATTTCAGATAGTTATAACCGATGAATCAGGCTCCAGTCGAACGGAAGAACTGATGAACCTGCAG
AAATCAGGAGATGCCCTGAATGATATCGGATTATCAGTTTCAGAATCGAAGCAGTTGTTGGGGGCAGTCCAGAAGTCGCTGGTTCAGCAACAGGCTGACG
AATATATTCACCAGAATATCCGATGTCCTCACTGCCTTACGAAGCGCAGAATCAAAGGCCAACAAAAAATCCAATACCGGACGTTGTTTGGCGTTATTCC
TGTATCAGGGCTTCGGGTGTATCGGTGCCGCTGTGAAGAAAGTGCAACAAAAACAGTCAGTCTGCTCAGTGACTGGGCTGGAGATCACACTCACCCTGCA
CTGAAATATATAGAAACCCGCTGGGCCTCTTTGATCTCGTATGAAATGACGGTTCGTTTACTAAAAGATGTCCTGCCGGTAGGGTACAGTCTGAATGCCT
CAACAGTGAGGAATCATTTATGCCGTGTGGCACAGCGTCTTGATTCTGAGGCAGAATCACATTCCGGCTTTATTTCAGGTTGCCCCCGCGACTGGGGAAA
CCTGCCAAAACCGGGAAAACCTCTGGTGGTGGGTATTGATGGCGGTTATGTCCGCGATCGGGATAACAAGAAACGTAATTTTGAAATTATTGCCGGTAAA
TCATTTTCAATCGGAGCACCGGCCGACGCACGTCGCTTTGGTTTTGTCCAGAAGAGCGACTGTCATCCGGAACGTCGGCTCATGGCACACCTCTCTGCTC
AGGGAATGCAGGCTAACCAGCAGATATTCTTTTTATCCGACGGCGCGGATAATCTGAGAGAACTGCAGTTCGGTATGTACCCTGAGTCAATTCATGTGCT
TGACTGGTTTCATATAACGATGAGGCTGACGGTGTTAATGCAATATGCAAAGGGGTTGCAGGCATCAGAGCCAGCGACGGGCAGTAAGGTGTTATCGCTT
CTGGAAAGCAGTAAACGATATCTCTGGCACGGTAATGTTGCCACTGCACTGGATCGCATTGACGATTGCGTTATGTATTGTGATGACCCTGAACTCAACT
ATGTAAACCTGAAAGCCCTGCAAAAACAGCTGGATGAGATGTATACCTACATCCGTAATAATCAGATGATGATCCCAAACTACGGAGAAATGTGCCGGTA
TGGTGAGCCGGTTTCAACAGCGTTTGTCGAGTCAACAATCAACGAAGTGATCGCCCGACGAATGGCCAAAAAGCAGCAGATGCAGTGGAGTAGAAAGGGC
GCGCATTATTTGTTACAGACCAGAACTGCAGTCCTGAATAACGAACTACGGGACAAATTCGCCAGTTGGTATCCCGGTTGTACGATAGACGCTCAGAGTA
GAGGGACGTTATCCGCTATGGCAGCATAGCTACTGCCCCAAGGTTTTTCATGCTCTC
Protein section
ORF number : 3
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
591 bp | 196 aa | 75 | 665 | + | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MMPPLVMKVYVIKIAVRGVSPMVWRRLRIAADTSLAALHFIIQIIQGWGDDHLHQFHIYGKDYGITYEGGIGFPDNPFQVVIDDFEFDVGDRFTYEYNFF
EHWIHDIRVEAIYENTELKTPFCISGHGMPGATVADEFDKTLAFLEAIVNADDETTIGEIRPFADDLDAVRFNRNKINRRLSKLNLASPALEPEVI
EHWIHDIRVEAIYENTELKTPFCISGHGMPGATVADEFDKTLAFLEAIVNADDETTIGEIRPFADDLDAVRFNRNKINRRLSKLNLASPALEPEVI
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
573 bp | 190 aa | 819 | 1391 | + | No |
Annotation : Serine recombinaseDescription :
ORF sequence :
MQYAYIRVSSADQNTARQEEALLKAGFQPDKIYVEHASAKDTNRPELQKLLEQLRPGDTLLVHSIDRLCRNMMDMCAVTTRLREMGVTLIFLKEQLTFNA
GISNPMQELQLHMMSAFSQFERALLKERQADGIAAKKARGEKTGRPCADIKKVQEIDELRSRG VRLRIACDHAGLGVSTYYKLRNQMKNQ
GISNPMQELQLHMMSAFSQFERALLKERQADGIAAKKARGEKTGRPCADIKKVQEIDELRSRG VRLRIACDHAGLGVSTYYKLRNQMKNQ
Blast result :ORF 3
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1404 bp | 467 aa | 1426 | 2829 | + | No |
Chemistry : DDE
ORF sequence :
MKLIFQIVITDESGSSRTEELMNLQKSGDALNDIGLSVSESKQLLGAVQKSLVQQQADEYIHQNIRCPHCLTKRRIKGQQKIQYRTLFGVIPVSGLRVYR
CRCEESATKTVSLLSDWAGDHTHPALKYIETRWASLISYEMTVRLLKDVLPVGYSLNASTVRNHLCRVAQRLDSEAESHSGFISGCPRDWGNLPKPGKPL
VVGIDGGYVRDRDNKKRNFEIIAGKSFSIGAPADARRFGFVQKSDCHPERRLMAHLSAQGMQANQQIFFLSDGADNLRELQFGMYPESIHVLDWFHITMR
LTVLMQYAKGLQASEPATGSKVLSLLESSKRYLWHGNVATALDRIDDCVMYCDDPELNYVNLKALQKQLDEMYTYIRNNQMMIPNYGEMCRYGEPVSTAF
VESTINEVIARRMAKKQQMQWSRKGAHYLLQTRTAVLNNELRDKFASWYPGCTIDAQSRGTLSAMAA
CRCEESATKTVSLLSDWAGDHTHPALKYIETRWASLISYEMTVRLLKDVLPVGYSLNASTVRNHLCRVAQRLDSEAESHSGFISGCPRDWGNLPKPGKPL
VVGIDGGYVRDRDNKKRNFEIIAGKSFSIGAPADARRFGFVQKSDCHPERRLMAHLSAQGMQANQQIFFLSDGADNLRELQFGMYPESIHVLDWFHITMR
LTVLMQYAKGLQASEPATGSKVLSLLESSKRYLWHGNVATALDRIDDCVMYCDDPELNYVNLKALQKQLDEMYTYIRNNQMMIPNYGEMCRYGEPVSTAF
VESTINEVIARRMAKKQQMQWSRKGAHYLLQTRTAVLNNELRDKFASWYPGCTIDAQSRGTLSAMAA
Blast result :
Comments
The two first ORFs are passenger genes annotated as hypothetical protein (ORFA) and putative transposon resolvase (ORFB).
References