ISSusp3

  • Family ISKra4
  • Group ISAzba1
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AALZ01000015 ND Sulfitobacter sp.
Sulfitobacter sp. NAS-14.1
DNA section
IS Length : 1434 bp

Ends


IR Length : 22/23

IRL : GGGAGTGGGCAAAACCTGGTGGTCGACGTGGTAGGGTAAGGTTTCGGAAC
IRR : GGGAGTGGGCAAAACTTGGTGGTTAAGCGGCCCGCTTTGAGACGCCTAGC

Insertion site


Left flankDirect repeatRight flankDR Length
AGCCCTTAATGTTGGATTTC0

DNA sequence

GGGAGTGGGCAAAACCTGGTGGTCGACGTGGTAGGGTAAGGTTTCGGAACAAGGCGGGACCCACCATGGATGTAAGCATTTTTATCGAGACGACGTTTGA
CGATGGAGAAACCAAGAGGCGCAATATCGGTCGACTTCGCCGTGCGCCGGATGAGTTTGGTTCCGAAAATTTAGGCCTTCTCCTAGACGACGCAAAGACC
TTGTTGAGGCGCTTGCAGGAAGCGATTGTGCAAGATCAGGTCGGTGAAGCATTTGATGCTCGCCGGAAATGCGATGACTGTGGCAAACAACGCGCGATCC
ATGATGATCGAGGGCGTATTCTCGACACTCTTTTCGGGCGAATTCGGGTGAAGTGGCCAAGGCTTCGACGCTGCTTGTGCCAACCGGCTGAGGTCGCGAA
ATCTGGGCCACAATCACCACTTGCCGGGTTGTTCTCTGACCGTGCGACTGCCGAACTTCGGCGCCTGCAGGCTGAATTGGGGGCCAGGCACTCGTTTCGG
GAAGCCGCTCGATTGATCGAAATGTTCATGCCCTGTTCGGCTCAATTGAACACGACCGTTCGAAATCGTTTGGGTCGCATCGCCGACGAGCTAGGCCACG
AAGACGTAAGCCAAGGAGACGCGGATACAATCGCGCCGCCATCACCACTAACCCTTTTCCTAGATGGTGCGCACATACGATGTCGACCTGAATACCAGAA
GCGGCACCTCGATGTTGTAGTCGGCAAGGTTGAAAGCCCCAATATGAGCCGGCGGTTTGGTTTCGTGCAGCAAGCCGCCGGTTCTCCTGCAAAGCAACTC
CGACATGACCTGATCGCGCAGGGCTGGGACGGTCAGAGCAAAGTGACCGTGATTTCAGACGGCGAACCTGCACTGCCGAATTTGGTGAGGCGTGCCGTTC
GAGGTCCCGTCACCCACATACTGGACTGGTGGCATATCTCGATGCGGGTCAAGCACATTGAAAATGCGGTGCGGGGCCTTCTGCAATCGAAGGGCTTTTC
AGGGTTGCCGCTACTCTTCGAGCGACCTGCTGATACACTGCGTTGGTACCTTTGGCACGGCAAAGTGATGACCGCCGCGACAATCCTCAAGGTTCTTCAG
ATCGATTGCGATCGTCTGCACGCCGAAACCCGAGAATTACGAGAAGCGGCCAGGCGCGTCAAAGCCCGGTGCCAGGATCTCTATTCCTACCTTGCGAACA
ACTTTGACGCGCTCGTGGACTACGGCCATCGACCCCGGAATGGCCTCGCAGTTTCGTCGTCTCGGGCAGAAGGCTGTGTTGATGACATCGGCAACACCCG
CATGGGCAAGCGGCGGCGCATGAGATGGTCACCGCGGGGCGCGCATCGGGTTGCCGTCACTCGGGCCGCTGTGCTTGACGGAAGGCTAGGCGTCTCAAAG
CGGGCCGCTTAACCACCAAGTTTTGCCCACTCCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1347 bp448 aa661412+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MDVSIFIETTFDDGETKRRNIGRLRRAPDEFGSENLGLLLDDAKTLLRRLQEAIVQDQVGEAFDARRKCDDCGKQRAIHDDRGRILDTLFGRIRVKWPRL
RRCLCQPAEVAKSGPQSPLAGLFSDRATAELRRLQAELGARHSFREAARLIEMFMPCSAQLNTTVRNRLGRIADELGHEDVSQGDADTIAPPSPLTLFLD
GAHIRCRPEYQKRHLDVVVGKVESPNMSRRFGFVQQAAGSPAKQLRHDLIAQGWDGQSKVTVISDGEPALPNLVRRAVRGPVTHILDWWHISMRVKHIEN
AVRGLLQSKGFSGLPLLFERPADTLRWYLWHGKVMTAATILKVLQIDCDRLHAETRELREAARRVKARCQDLYSYLANNFDALVDYGHRPRNGLAVSSSR
AEGCVDDIGNTRMGKRRRMRWSPRGAHRVAVTRAAVLDGRLGVSKRAA

 

Blast result :
Comments
ISSusp3 is 48% aa similar to ISAzba1.
References