ISSusp3
- Family ISKra4
- Group ISAzba1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AALZ01000015 | ND | Sulfitobacter sp. | Sulfitobacter sp. NAS-14.1 |
DNA section
IS Length : 1434 bp
Ends
IR Length : 22/23
IRL : GGGAGTGGGCAAAACCTGGTGGTCGACGTGGTAGGGTAAGGTTTCGGAAC
IRR : GGGAGTGGGCAAAACTTGGTGGTTAAGCGGCCCGCTTTGAGACGCCTAGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AGCCCTTAAT | GTTGGATTTC | 0 |
DNA sequence
GGGAGTGGGCAAAACCTGGTGGTCGACGTGGTAGGGTAAGGTTTCGGAACAAGGCGGGACCCACCATGGATGTAAGCATTTTTATCGAGACGACGTTTGA
CGATGGAGAAACCAAGAGGCGCAATATCGGTCGACTTCGCCGTGCGCCGGATGAGTTTGGTTCCGAAAATTTAGGCCTTCTCCTAGACGACGCAAAGACC
TTGTTGAGGCGCTTGCAGGAAGCGATTGTGCAAGATCAGGTCGGTGAAGCATTTGATGCTCGCCGGAAATGCGATGACTGTGGCAAACAACGCGCGATCC
ATGATGATCGAGGGCGTATTCTCGACACTCTTTTCGGGCGAATTCGGGTGAAGTGGCCAAGGCTTCGACGCTGCTTGTGCCAACCGGCTGAGGTCGCGAA
ATCTGGGCCACAATCACCACTTGCCGGGTTGTTCTCTGACCGTGCGACTGCCGAACTTCGGCGCCTGCAGGCTGAATTGGGGGCCAGGCACTCGTTTCGG
GAAGCCGCTCGATTGATCGAAATGTTCATGCCCTGTTCGGCTCAATTGAACACGACCGTTCGAAATCGTTTGGGTCGCATCGCCGACGAGCTAGGCCACG
AAGACGTAAGCCAAGGAGACGCGGATACAATCGCGCCGCCATCACCACTAACCCTTTTCCTAGATGGTGCGCACATACGATGTCGACCTGAATACCAGAA
GCGGCACCTCGATGTTGTAGTCGGCAAGGTTGAAAGCCCCAATATGAGCCGGCGGTTTGGTTTCGTGCAGCAAGCCGCCGGTTCTCCTGCAAAGCAACTC
CGACATGACCTGATCGCGCAGGGCTGGGACGGTCAGAGCAAAGTGACCGTGATTTCAGACGGCGAACCTGCACTGCCGAATTTGGTGAGGCGTGCCGTTC
GAGGTCCCGTCACCCACATACTGGACTGGTGGCATATCTCGATGCGGGTCAAGCACATTGAAAATGCGGTGCGGGGCCTTCTGCAATCGAAGGGCTTTTC
AGGGTTGCCGCTACTCTTCGAGCGACCTGCTGATACACTGCGTTGGTACCTTTGGCACGGCAAAGTGATGACCGCCGCGACAATCCTCAAGGTTCTTCAG
ATCGATTGCGATCGTCTGCACGCCGAAACCCGAGAATTACGAGAAGCGGCCAGGCGCGTCAAAGCCCGGTGCCAGGATCTCTATTCCTACCTTGCGAACA
ACTTTGACGCGCTCGTGGACTACGGCCATCGACCCCGGAATGGCCTCGCAGTTTCGTCGTCTCGGGCAGAAGGCTGTGTTGATGACATCGGCAACACCCG
CATGGGCAAGCGGCGGCGCATGAGATGGTCACCGCGGGGCGCGCATCGGGTTGCCGTCACTCGGGCCGCTGTGCTTGACGGAAGGCTAGGCGTCTCAAAG
CGGGCCGCTTAACCACCAAGTTTTGCCCACTCCC
CGATGGAGAAACCAAGAGGCGCAATATCGGTCGACTTCGCCGTGCGCCGGATGAGTTTGGTTCCGAAAATTTAGGCCTTCTCCTAGACGACGCAAAGACC
TTGTTGAGGCGCTTGCAGGAAGCGATTGTGCAAGATCAGGTCGGTGAAGCATTTGATGCTCGCCGGAAATGCGATGACTGTGGCAAACAACGCGCGATCC
ATGATGATCGAGGGCGTATTCTCGACACTCTTTTCGGGCGAATTCGGGTGAAGTGGCCAAGGCTTCGACGCTGCTTGTGCCAACCGGCTGAGGTCGCGAA
ATCTGGGCCACAATCACCACTTGCCGGGTTGTTCTCTGACCGTGCGACTGCCGAACTTCGGCGCCTGCAGGCTGAATTGGGGGCCAGGCACTCGTTTCGG
GAAGCCGCTCGATTGATCGAAATGTTCATGCCCTGTTCGGCTCAATTGAACACGACCGTTCGAAATCGTTTGGGTCGCATCGCCGACGAGCTAGGCCACG
AAGACGTAAGCCAAGGAGACGCGGATACAATCGCGCCGCCATCACCACTAACCCTTTTCCTAGATGGTGCGCACATACGATGTCGACCTGAATACCAGAA
GCGGCACCTCGATGTTGTAGTCGGCAAGGTTGAAAGCCCCAATATGAGCCGGCGGTTTGGTTTCGTGCAGCAAGCCGCCGGTTCTCCTGCAAAGCAACTC
CGACATGACCTGATCGCGCAGGGCTGGGACGGTCAGAGCAAAGTGACCGTGATTTCAGACGGCGAACCTGCACTGCCGAATTTGGTGAGGCGTGCCGTTC
GAGGTCCCGTCACCCACATACTGGACTGGTGGCATATCTCGATGCGGGTCAAGCACATTGAAAATGCGGTGCGGGGCCTTCTGCAATCGAAGGGCTTTTC
AGGGTTGCCGCTACTCTTCGAGCGACCTGCTGATACACTGCGTTGGTACCTTTGGCACGGCAAAGTGATGACCGCCGCGACAATCCTCAAGGTTCTTCAG
ATCGATTGCGATCGTCTGCACGCCGAAACCCGAGAATTACGAGAAGCGGCCAGGCGCGTCAAAGCCCGGTGCCAGGATCTCTATTCCTACCTTGCGAACA
ACTTTGACGCGCTCGTGGACTACGGCCATCGACCCCGGAATGGCCTCGCAGTTTCGTCGTCTCGGGCAGAAGGCTGTGTTGATGACATCGGCAACACCCG
CATGGGCAAGCGGCGGCGCATGAGATGGTCACCGCGGGGCGCGCATCGGGTTGCCGTCACTCGGGCCGCTGTGCTTGACGGAAGGCTAGGCGTCTCAAAG
CGGGCCGCTTAACCACCAAGTTTTGCCCACTCCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1347 bp | 448 aa | 66 | 1412 | + | No |
Chemistry : DDE
ORF sequence :
MDVSIFIETTFDDGETKRRNIGRLRRAPDEFGSENLGLLLDDAKTLLRRLQEAIVQDQVGEAFDARRKCDDCGKQRAIHDDRGRILDTLFGRIRVKWPRL
RRCLCQPAEVAKSGPQSPLAGLFSDRATAELRRLQAELGARHSFREAARLIEMFMPCSAQLNTTVRNRLGRIADELGHEDVSQGDADTIAPPSPLTLFLD
GAHIRCRPEYQKRHLDVVVGKVESPNMSRRFGFVQQAAGSPAKQLRHDLIAQGWDGQSKVTVISDGEPALPNLVRRAVRGPVTHILDWWHISMRVKHIEN
AVRGLLQSKGFSGLPLLFERPADTLRWYLWHGKVMTAATILKVLQIDCDRLHAETRELREAARRVKARCQDLYSYLANNFDALVDYGHRPRNGLAVSSSR
AEGCVDDIGNTRMGKRRRMRWSPRGAHRVAVTRAAVLDGRLGVSKRAA
RRCLCQPAEVAKSGPQSPLAGLFSDRATAELRRLQAELGARHSFREAARLIEMFMPCSAQLNTTVRNRLGRIADELGHEDVSQGDADTIAPPSPLTLFLD
GAHIRCRPEYQKRHLDVVVGKVESPNMSRRFGFVQQAAGSPAKQLRHDLIAQGWDGQSKVTVISDGEPALPNLVRRAVRGPVTHILDWWHISMRVKHIEN
AVRGLLQSKGFSGLPLLFERPADTLRWYLWHGKVMTAATILKVLQIDCDRLHAETRELREAARRVKARCQDLYSYLANNFDALVDYGHRPRNGLAVSSSR
AEGCVDDIGNTRMGKRRRMRWSPRGAHRVAVTRAAVLDGRLGVSKRAA
Blast result :
Comments
ISSusp3 is 48% aa similar to ISAzba1.
References