ISCre2
- Family IS256
- Group IS1249
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_015673 | ND | Corynebacterium resistens | Corynebacterium resistens DSM 45100 |
DNA section
IS Length : 1411 bp
Ends
IR Length : 24
IRL : GGGTTAAGTAGCAAAAAGTGTGTCTGACTTTCAGCATTATTACTGATCAG
IRR : GGGTTAAGTAGCAAAAAGTGTGTCCGCTCGGTGTGTTGCGGGGCGGGCAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTTTGCAGAC | CTATCGGT | TCAGTCAGAC | 8 |
DNA sequence
GGGTTAAGTAGCAAAAAGTGTGTCTGACTTTCAGCATTATTACTGATCAGAACGGGTAAATCGGGCGGATATAAGCATCAAGACCTTATATCCGCCCGAT
TAGTGTTCAATCCACCGGAATGGCACCCGCATGTGCTAATCGGGGGTTGGTGTGCTTTCCGGGTGAGTAAAAACAGACCACGATGCCCGATATGCGCTGG
GCAAATGAAGAAAAACGGAACCACTACTAAAGGCACAACCAGGTGGCGATGCAAGGACCCGAACTGCGGCAATTCCACGACGCGAACCCGCACCGACCGC
ACGCAGACCCGCGACTTTAAAGCCTTCGTCTCTTATGCCACCTCCACAGCAACGTTGTCTGAACTCGCCCAGCAACAAGGGGTAAGCCGTTGGACACTTG
ACCGCCGATTCACACCGTTCTGGCTCATCGACATTCCCAACGACGGTGACCCACAGCGCGTCTACGACCAGATCTTCATCGACGGCACCTACACCACCGC
CGGATGCCTACTGGTAGCCGCAAGCCGTGACCACGTCATCTCCTGGCACTGGGCCAAACGCGAGTCAGCCCACGCCTACACGCAGCTACTCCGCAACATC
GCTGAGCCGCTCTGCGTTGTCCTCGACGGCGGGCAAGGCGCCTACTCAGCAATCAAAGCCTGCTGGCCGAACGCGATGATCCAACGATGCCTCGTCCATG
CGCAACGCGTCATCCGCCGCTACACCACAGCACGACCCCGCACCGATGCCGGCAAAGCCATCTACGCCCTGGCGTTGAAACTGACCCGTATCACCACCGT
GGACCACGCACGCAACTGGACACTACGCCTGCACGACTTCGGGCAGGTATTCAACGCATTCCTCAACGAGAAAACGCCCGTGCCAAAAGAGCGCCGCACA
CTCAACAACCAGTGGGAATGGACCCATCTGCGAGTGCGCAAGGCATACAACTCCCTGCTGCACCTCTCACGGAAAGGATGGCTGTTTACCTACCTGCAGC
CCCCACCGAATGCGCTTGAGCCTCAACGCTGGGCTTCAACGACAAACAGTCTGGAAGGCGGCATCAACGCCCAGCTCAAACGCATCGCCGACGCGCATCG
CGGCAGGTCCGGGGAACGCCAACGCAGAATGCTCGAGTGGTACCTGCACTCGAAAACGCAACTGCCTGACGACCCATTAAAAATCGCCAGGCAGTGCAAT
TTCGGCCAAGATCAACTCGCCAAAGTCAACGATCTTGTCGAAGAAGACCACAACAAAGCCGACCAGGAAACAGGCCGACCAGCCTTCTACGACAACGCTA
TCCCAACCGAGTACGAACACTCGATAGGAATCAGAAAAGGCCCCATGAAGTAACAAACGGTGTGCCCGCCCCGCAACACACCGAGCGGACACACTTTTTG
CTACTTAACCC
TAGTGTTCAATCCACCGGAATGGCACCCGCATGTGCTAATCGGGGGTTGGTGTGCTTTCCGGGTGAGTAAAAACAGACCACGATGCCCGATATGCGCTGG
GCAAATGAAGAAAAACGGAACCACTACTAAAGGCACAACCAGGTGGCGATGCAAGGACCCGAACTGCGGCAATTCCACGACGCGAACCCGCACCGACCGC
ACGCAGACCCGCGACTTTAAAGCCTTCGTCTCTTATGCCACCTCCACAGCAACGTTGTCTGAACTCGCCCAGCAACAAGGGGTAAGCCGTTGGACACTTG
ACCGCCGATTCACACCGTTCTGGCTCATCGACATTCCCAACGACGGTGACCCACAGCGCGTCTACGACCAGATCTTCATCGACGGCACCTACACCACCGC
CGGATGCCTACTGGTAGCCGCAAGCCGTGACCACGTCATCTCCTGGCACTGGGCCAAACGCGAGTCAGCCCACGCCTACACGCAGCTACTCCGCAACATC
GCTGAGCCGCTCTGCGTTGTCCTCGACGGCGGGCAAGGCGCCTACTCAGCAATCAAAGCCTGCTGGCCGAACGCGATGATCCAACGATGCCTCGTCCATG
CGCAACGCGTCATCCGCCGCTACACCACAGCACGACCCCGCACCGATGCCGGCAAAGCCATCTACGCCCTGGCGTTGAAACTGACCCGTATCACCACCGT
GGACCACGCACGCAACTGGACACTACGCCTGCACGACTTCGGGCAGGTATTCAACGCATTCCTCAACGAGAAAACGCCCGTGCCAAAAGAGCGCCGCACA
CTCAACAACCAGTGGGAATGGACCCATCTGCGAGTGCGCAAGGCATACAACTCCCTGCTGCACCTCTCACGGAAAGGATGGCTGTTTACCTACCTGCAGC
CCCCACCGAATGCGCTTGAGCCTCAACGCTGGGCTTCAACGACAAACAGTCTGGAAGGCGGCATCAACGCCCAGCTCAAACGCATCGCCGACGCGCATCG
CGGCAGGTCCGGGGAACGCCAACGCAGAATGCTCGAGTGGTACCTGCACTCGAAAACGCAACTGCCTGACGACCCATTAAAAATCGCCAGGCAGTGCAAT
TTCGGCCAAGATCAACTCGCCAAAGTCAACGATCTTGTCGAAGAAGACCACAACAAAGCCGACCAGGAAACAGGCCGACCAGCCTTCTACGACAACGCTA
TCCCAACCGAGTACGAACACTCGATAGGAATCAGAAAAGGCCCCATGAAGTAACAAACGGTGTGCCCGCCCCGCAACACACCGAGCGGACACACTTTTTG
CTACTTAACCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1251 bp | 416 aa | 103 | 1353 | + | No |
Chemistry : DDE
ORF sequence :
MFNPPEWHPHVLIGGWCAFRVSKNRPRCPICAGQMKKNGTTTKGTTRWRCKDPNCGNSTTRTRTDRTQTRDFKAFVSYATSTATLSELAQQQGVSRWTLD
RRFTPFWLIDIPNDGDPQRVYDQIFIDGTYTTAGCLLVAASRDHVISWHWAKRESAHAYTQLLRNIAEPLCVVLDGGQGAYSAIKACWPNAMIQRCLVHA
QRVIRRYTTARPRTDAGKAIYALALKLTRITTVDHARNWTLRLHDFGQVFNAFLNEKTPVPKERRTLNNQWEWTHLRVRKAYNSLLHLSRKGWLFTYLQP
PPNALEPQRWASTTNSLEGGINAQLKRIADAHRGRSGERQRRMLEWYLHSKTQLPDDPLKIARQCNFGQDQLAKVNDLVEEDHNKADQETGRPAFYDNAI
PTEYEHSIGIRKGPMK
RRFTPFWLIDIPNDGDPQRVYDQIFIDGTYTTAGCLLVAASRDHVISWHWAKRESAHAYTQLLRNIAEPLCVVLDGGQGAYSAIKACWPNAMIQRCLVHA
QRVIRRYTTARPRTDAGKAIYALALKLTRITTVDHARNWTLRLHDFGQVFNAFLNEKTPVPKERRTLNNQWEWTHLRVRKAYNSLLHLSRKGWLFTYLQP
PPNALEPQRWASTTNSLEGGINAQLKRIADAHRGRSGERQRRMLEWYLHSKTQLPDDPLKIARQCNFGQDQLAKVNDLVEEDHNKADQETGRPAFYDNAI
PTEYEHSIGIRKGPMK
Blast result :
Comments
ISCre2 is 93% aa similar to ISAmas1.
References
1] ISfinder annotation (2013)
2] Schroeder,J., Maus,I., Meyer,K., Woerdemann,S. and Tauch,A. (2011) Direct submission GenBank.
2] Schroeder,J., Maus,I., Meyer,K., Woerdemann,S. and Tauch,A. (2011) Direct submission GenBank.