ISNagr8
- Family IS630
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP003377 | ND | Natronobacterium gregoryi | Natronobacterium gregoryi SP2 |
DNA section
IS Length : 1152 bp
Ends
IR Length : 15/21
IRL : ATGAGTGACAGAAGTTTTGGGCGTGGGCTAAGACGAACGGGGTAATGGGA
IRR : ATGATCAAGATAACTTTTGCAAATATGGACTGAGGAACTGGTCGATCCAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GGTGGCGCGA | TA | ACGCGCCACC | 2 |
AGCGCGACCA | TA | GAGTCGCGCT | 2 |
GAGCGGAGCA | TA | TAGCGGTGGA | 2 |
CTCGGGGCTC | TA | GACCCCGAGG | 2 |
CGAGAGAGCT | TA | CGCTCTCTCG | 2 |
CGTGAGACCG | TA | AGGTCTCACG | 2 |
GAGCGGAGCG | TA | AGCCGCGCTC | 2 |
DNA sequence
ATGAGTGACAGAAGTTTTGGGCGTGGGCTAAGACGAACGGGGTAATGGGAGGAGACCGGCGGGGCGAGCTCGTTCGTCATCTGAGCGAGGAGGAGTTGGA
TCGTCTGCTGGACGAAGCAGACGATCCAAAGGTCGTCAAGCGGCTCACCTTTGTCAAACGTCTCTACAAGGGTGCAACGTACGAAGAAGCAGCCGACGAC
GTTGGGAAATCTGCGTCGACTGGAAGTCGCTGGGCACGTCGATGGAACGATGGCGGGCTGGGTCAGTTGACACCGAACTTCGGGGGCGGAAGGCCCCCGA
AGCTCGGTGACGAGGAACAAGAGTGTCTTCTAGAACTTCTCCGGGAGGGACAGCCCTGGAAAGCACAGGAAGTTCACCAGCTCTTGGACGAAGAGTTCGA
TGTTGAGTACCATCCGGATTATCTCGGTCGATTCCTCCGGAATCTCGGACTGTCTTACGCTAAACCACGTCCAAAACGTCCCTCACGGCCAGAAAATGCA
GATGAAATCCTCGAAGAACGCGTCGCAGACGCGTTCGACGAGGAAACAGAGACAGCACATAACAAGCGTCCCGAGGATGAGGACGAAGGCTGGGTTCTCG
ACGACGATATCTGTACAGATGGAGGAACTATCGTCGGTTTTTGTGACGCTTCTCATCCGCAACCATACGACAATTCGCATCGACTGTGGTACGTCGATGA
TCCGACACTCGAACGACCGCTGGTGAAGCTTGACGAACCAGCGGTCGGGTGCTATACGCTCAACGGCGAAAGTGTCCTGACCTTTCCTGAAGATCAATCG
AAAGAGAACATCTGTGCCCTATTGGAGGAGGTCCGCGAGCAGAATCCGGGAACGCGGATTCTGCTCGTCTTGGACAACTTCTCGTCTCACATCTGTGAGC
ACACGCGCAAGCGCGCACATCAACTCGGTATCGATCTCGTCTTTCTTCCGGTCGGTTCACCGCATCTCAATCCAATCGAGCAGGTCTGGAAAGTGCTCAA
ACGGAATGCTTCACCAATCGTCGTGGCGAGCGAGAGCGCGTTCCGCACTCTCGCTCGCCGCCTCTTCAACACCCTCACCGATCGACTTGGATTCGCCAAG
TCTTGGATCGACCAGTTCCTCAGTCCATATTTGCAAAAGTTATCTTGATCAT
TCGTCTGCTGGACGAAGCAGACGATCCAAAGGTCGTCAAGCGGCTCACCTTTGTCAAACGTCTCTACAAGGGTGCAACGTACGAAGAAGCAGCCGACGAC
GTTGGGAAATCTGCGTCGACTGGAAGTCGCTGGGCACGTCGATGGAACGATGGCGGGCTGGGTCAGTTGACACCGAACTTCGGGGGCGGAAGGCCCCCGA
AGCTCGGTGACGAGGAACAAGAGTGTCTTCTAGAACTTCTCCGGGAGGGACAGCCCTGGAAAGCACAGGAAGTTCACCAGCTCTTGGACGAAGAGTTCGA
TGTTGAGTACCATCCGGATTATCTCGGTCGATTCCTCCGGAATCTCGGACTGTCTTACGCTAAACCACGTCCAAAACGTCCCTCACGGCCAGAAAATGCA
GATGAAATCCTCGAAGAACGCGTCGCAGACGCGTTCGACGAGGAAACAGAGACAGCACATAACAAGCGTCCCGAGGATGAGGACGAAGGCTGGGTTCTCG
ACGACGATATCTGTACAGATGGAGGAACTATCGTCGGTTTTTGTGACGCTTCTCATCCGCAACCATACGACAATTCGCATCGACTGTGGTACGTCGATGA
TCCGACACTCGAACGACCGCTGGTGAAGCTTGACGAACCAGCGGTCGGGTGCTATACGCTCAACGGCGAAAGTGTCCTGACCTTTCCTGAAGATCAATCG
AAAGAGAACATCTGTGCCCTATTGGAGGAGGTCCGCGAGCAGAATCCGGGAACGCGGATTCTGCTCGTCTTGGACAACTTCTCGTCTCACATCTGTGAGC
ACACGCGCAAGCGCGCACATCAACTCGGTATCGATCTCGTCTTTCTTCCGGTCGGTTCACCGCATCTCAATCCAATCGAGCAGGTCTGGAAAGTGCTCAA
ACGGAATGCTTCACCAATCGTCGTGGCGAGCGAGAGCGCGTTCCGCACTCTCGCTCGCCGCCTCTTCAACACCCTCACCGATCGACTTGGATTCGCCAAG
TCTTGGATCGACCAGTTCCTCAGTCCATATTTGCAAAAGTTATCTTGATCAT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1104 bp | 367 aa | 45 | 1148 | + | No |
Chemistry : DDE
ORF sequence :
MGGDRRGELVRHLSEEELDRLLDEADDPKVVKRLTFVKRLYKGATYEEAADDVGKSASTGSRWARRWNDGGLGQLTPNFGGGRPPKLGDEEQECLLELLR
EGQPWKAQEVHQLLDEEFDVEYHPDYLGRFLRNLGLSYAKPRPKRPSRPENADEILEERVADAFDEETETAHNKRPEDEDEGWVLDDDICTDGGTIVGFC
DASHPQPYDNSHRLWYVDDPTLERPLVKLDEPAVGCYTLNGESVLTFPEDQSKENICALLEEVREQNPGTRILLVLDNFSSHICEHTRKRAHQLGIDLVF
LPVGSPHLNPIEQVWKVLKRNASPIVVASESAFRTLARRLFNTLTDRLGFAKSWIDQFLSPYLQKLS
EGQPWKAQEVHQLLDEEFDVEYHPDYLGRFLRNLGLSYAKPRPKRPSRPENADEILEERVADAFDEETETAHNKRPEDEDEGWVLDDDICTDGGTIVGFC
DASHPQPYDNSHRLWYVDDPTLERPLVKLDEPAVGCYTLNGESVLTFPEDQSKENICALLEEVREQNPGTRILLVLDNFSSHICEHTRKRAHQLGIDLVF
LPVGSPHLNPIEQVWKVLKRNASPIVVASESAFRTLARRLFNTLTDRLGFAKSWIDQFLSPYLQKLS
Blast result :
Comments
ISNagr8 is 81% aa zsimilar to ISHvo8.
References
1] Pfeiffer, F. (2013) Direct submission
2] Lucas,S., Han,J., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Peters,L., Mikhailova,N., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Pagani,I., Sproer,C., Anderson,I. and Woyke,T. (2012) Direct submission GenBank
2] Lucas,S., Han,J., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Peters,L., Mikhailova,N., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Pagani,I., Sproer,C., Anderson,I. and Woyke,T. (2012) Direct submission GenBank