ISNagr8

  • Family IS630
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP003377 ND Natronobacterium gregoryi
Natronobacterium gregoryi SP2
DNA section
IS Length : 1152 bp

Ends


IR Length : 15/21

IRL : ATGAGTGACAGAAGTTTTGGGCGTGGGCTAAGACGAACGGGGTAATGGGA
IRR : ATGATCAAGATAACTTTTGCAAATATGGACTGAGGAACTGGTCGATCCAA

Insertion site


Left flankDirect repeatRight flankDR Length
GGTGGCGCGATAACGCGCCACC2
AGCGCGACCATAGAGTCGCGCT2
GAGCGGAGCATATAGCGGTGGA2
CTCGGGGCTCTAGACCCCGAGG2
CGAGAGAGCTTACGCTCTCTCG2
CGTGAGACCGTAAGGTCTCACG2
GAGCGGAGCGTAAGCCGCGCTC2

DNA sequence

ATGAGTGACAGAAGTTTTGGGCGTGGGCTAAGACGAACGGGGTAATGGGAGGAGACCGGCGGGGCGAGCTCGTTCGTCATCTGAGCGAGGAGGAGTTGGA
TCGTCTGCTGGACGAAGCAGACGATCCAAAGGTCGTCAAGCGGCTCACCTTTGTCAAACGTCTCTACAAGGGTGCAACGTACGAAGAAGCAGCCGACGAC
GTTGGGAAATCTGCGTCGACTGGAAGTCGCTGGGCACGTCGATGGAACGATGGCGGGCTGGGTCAGTTGACACCGAACTTCGGGGGCGGAAGGCCCCCGA
AGCTCGGTGACGAGGAACAAGAGTGTCTTCTAGAACTTCTCCGGGAGGGACAGCCCTGGAAAGCACAGGAAGTTCACCAGCTCTTGGACGAAGAGTTCGA
TGTTGAGTACCATCCGGATTATCTCGGTCGATTCCTCCGGAATCTCGGACTGTCTTACGCTAAACCACGTCCAAAACGTCCCTCACGGCCAGAAAATGCA
GATGAAATCCTCGAAGAACGCGTCGCAGACGCGTTCGACGAGGAAACAGAGACAGCACATAACAAGCGTCCCGAGGATGAGGACGAAGGCTGGGTTCTCG
ACGACGATATCTGTACAGATGGAGGAACTATCGTCGGTTTTTGTGACGCTTCTCATCCGCAACCATACGACAATTCGCATCGACTGTGGTACGTCGATGA
TCCGACACTCGAACGACCGCTGGTGAAGCTTGACGAACCAGCGGTCGGGTGCTATACGCTCAACGGCGAAAGTGTCCTGACCTTTCCTGAAGATCAATCG
AAAGAGAACATCTGTGCCCTATTGGAGGAGGTCCGCGAGCAGAATCCGGGAACGCGGATTCTGCTCGTCTTGGACAACTTCTCGTCTCACATCTGTGAGC
ACACGCGCAAGCGCGCACATCAACTCGGTATCGATCTCGTCTTTCTTCCGGTCGGTTCACCGCATCTCAATCCAATCGAGCAGGTCTGGAAAGTGCTCAA
ACGGAATGCTTCACCAATCGTCGTGGCGAGCGAGAGCGCGTTCCGCACTCTCGCTCGCCGCCTCTTCAACACCCTCACCGATCGACTTGGATTCGCCAAG
TCTTGGATCGACCAGTTCCTCAGTCCATATTTGCAAAAGTTATCTTGATCAT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1104 bp367 aa451148+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MGGDRRGELVRHLSEEELDRLLDEADDPKVVKRLTFVKRLYKGATYEEAADDVGKSASTGSRWARRWNDGGLGQLTPNFGGGRPPKLGDEEQECLLELLR
EGQPWKAQEVHQLLDEEFDVEYHPDYLGRFLRNLGLSYAKPRPKRPSRPENADEILEERVADAFDEETETAHNKRPEDEDEGWVLDDDICTDGGTIVGFC
DASHPQPYDNSHRLWYVDDPTLERPLVKLDEPAVGCYTLNGESVLTFPEDQSKENICALLEEVREQNPGTRILLVLDNFSSHICEHTRKRAHQLGIDLVF
LPVGSPHLNPIEQVWKVLKRNASPIVVASESAFRTLARRLFNTLTDRLGFAKSWIDQFLSPYLQKLS

 

Blast result :
Comments
ISNagr8 is 81% aa zsimilar to ISHvo8.
References
1] Pfeiffer, F. (2013) Direct submission
2] Lucas,S., Han,J., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Peters,L., Mikhailova,N., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Pagani,I., Sproer,C., Anderson,I. and Woyke,T. (2012) Direct submission GenBank