ISNamo11
- Family IS6
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
HF582854 | ND | Natronomonas moolapensis | Natronomonas moolapensis 8.8.11 |
DNA section
IS Length : 698 bp
Ends
IR Length : 12/17
IRL : GACGGTGTTCAAATACGGATTGAAAGGTGAGGCGGTGCGTTTTCAAACTG
IRR : CCTCGTGTTCAGATACGCTGATTCCATGCGAAAGCAACGGATCTGAGCCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TGTTGGGCCG | GCAAGCGC | CAGGAGCCTC | 8 |
DNA sequence
GACGGTGTTCAAATACGGATTGAAAGGTGAGGCGGTGCGTTTTCAAACTGATTTATGCCCGAAAACGACCGCCTCAGCGGCTGTTTAGACGAGATCAACG
TAGAGTTCGTGGAGCGAGAAGCAACACCGAAGCTGTTGATGAAGCCCAGTATGCAGCTCCATCTCGCAGGATTATCGCTTTCGAATACTGTTTCGTTTCT
TGAGGTATTCGGTGTTGACCGGGGTCGATCCACCGTTCACAGCTGGGTTCACGAGGCCGATTTACAGCCGGAATCTGGTCGGTGCCCGAATCACGTTGCG
GTCGATGAAGCCGTGATTCAACTTGACGATGAACAATATTGGCTGTACGCCGCTGTCGATCCGGATTCAAACGATTTACTTCATACAAAGCTTGAACCGA
GAAGAACGAACGTGGTCGCAGATCAGTTTTTCGCGGAACTCCGCGACAAACACGACGTGGATGACGCGATCTTTCTCGTCGATGAAGCGGTTCCGCTTCA
CCGAGCCTGTGACAAACACGACCTCGGCTTCAGATACGAACGACATAGAGATCGGAACAGCGTCGAACGTGTCTTTCGCGAGGTAACACGCAGAACTACC
AGCTTCTCAAACTGTTTCAGCAACGCCAAAGCAGAAACTGCTGATAAGTGGCTCAGATCCGTTGCTTTCGCATGGAATCAGCGTATCTGAACACGAGG
TAGAGTTCGTGGAGCGAGAAGCAACACCGAAGCTGTTGATGAAGCCCAGTATGCAGCTCCATCTCGCAGGATTATCGCTTTCGAATACTGTTTCGTTTCT
TGAGGTATTCGGTGTTGACCGGGGTCGATCCACCGTTCACAGCTGGGTTCACGAGGCCGATTTACAGCCGGAATCTGGTCGGTGCCCGAATCACGTTGCG
GTCGATGAAGCCGTGATTCAACTTGACGATGAACAATATTGGCTGTACGCCGCTGTCGATCCGGATTCAAACGATTTACTTCATACAAAGCTTGAACCGA
GAAGAACGAACGTGGTCGCAGATCAGTTTTTCGCGGAACTCCGCGACAAACACGACGTGGATGACGCGATCTTTCTCGTCGATGAAGCGGTTCCGCTTCA
CCGAGCCTGTGACAAACACGACCTCGGCTTCAGATACGAACGACATAGAGATCGGAACAGCGTCGAACGTGTCTTTCGCGAGGTAACACGCAGAACTACC
AGCTTCTCAAACTGTTTCAGCAACGCCAAAGCAGAAACTGCTGATAAGTGGCTCAGATCCGTTGCTTTCGCATGGAATCAGCGTATCTGAACACGAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
636 bp | 211 aa | 55 | 690 | + | No |
Chemistry : DDE
ORF sequence :
MPENDRLSGCLDEINVEFVEREATPKLLMKPSMQLHLAGLSLSNTVSFLEVFGVDRGRSTVHSWVHEADLQPESGRCPNHVAVDEAVIQLDDEQYWLYAA
VDPDSNDLLHTKLEPRRTNVVADQFFAELRDKHDVDDAIFLVDEAVPLHRACDKHDLGFRYERHRDRNSVERVFREVTRRTTSFSNCFSNAKAETADKWL
RSVAFAWNQRI
VDPDSNDLLHTKLEPRRTNVVADQFFAELRDKHDVDDAIFLVDEAVPLHRACDKHDLGFRYERHRDRNSVERVFREVTRRTTSFSNCFSNAKAETADKWL
RSVAFAWNQRI
Blast result :
Comments
ISNamo11 is 86% aa similar to ISNamo10.
References
1] Pfeiffer, F. (2013) Direct submission
2] Dyall-Smith, M.L., Pfeiffer, F., Oberwinkler, T., Klee, K., Rampp, M., Palm, P., Gross, K., Schuster, S.C., Oesterhelt, D. (2013) Genome Announc. 1: e0009513
2] Dyall-Smith, M.L., Pfeiffer, F., Oberwinkler, T., Klee, K., Rampp, M., Palm, P., Gross, K., Schuster, S.C., Oesterhelt, D. (2013) Genome Announc. 1: e0009513