ISNamo7

  • Family IS6
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
HF582854 ND Natronomonas moolapensis
Natronomonas moolapensis 8.8.11
DNA section
IS Length : 697 bp

Ends


IR Length : 14/17

IRL : GGCGGTGTTCAGATAAGAATGAAAAGTGAGGCGGTACATTTTTTGAGTGC
IRR : GGTAGTGTTCACATAAGCTGATTCCATGCGAAGGCGAAGGATCGAAGCCA

Insertion site


Left flankDirect repeatRight flankDR Length
ATTTGTGCGTGGTAGCTATTCGATCGAG8
TCGATTGTCAAAGTAAATAGAAATAAAA8
CGGTTTCGACCCCCATCCGG0
TGGGTCAATAGTTTCGACGA0

DNA sequence

GGCGGTGTTCAGATAAGAATGAAAAGTGAGGCGGTACATTTTTTGAGTGCTCTATGCCCAAAAACGCCCGCCTCAACGGCCATTTGGACGAGATCGAGTT
AGGTTTTGTGGAGCGAGAAGCGACACCGAAATTACTGATGAAGCTTGGTATTCAACTCCATTTAGCTGGCCTATCACTTTCGAATACCATTTCTATCCTT
GAGATATTCGGTGTCAGTCGAGCTCGATCTACTGTTCACAACTGGGTTCACAGGGCAGATCTACAGCCCGAATCTGGTCGGGATCCGGATCACGTTGCGG
TGGATGAGACCGTGATCCGACTCAATGATGAGCAGTACTGGCTGTATGCTGCTGTCGATCCTGAGACAAACAAATTACTGTATACAACGCTTGAACCGAC
GACAAACAAGGCAATCGCTCACGCATTCTTTGCCGAACTCCGCGAGAAACACGACGTTGACGACGCGGTGTTTCTCATAGATGGCTCGCACTCACTGAAA
GACGCCTGTCGCCGCCATAGCCTCGATTTCAGATATGAACGCCATGGAAATCGGAATAGCGTCGAACGTGTCTTTCGAGAGGTAAAACGACGAACTATCA
GTTTTTCAAACTGTTTTAGCAATGCCGAAGCAGACACCGCCGACGATTGGCTTCGATCCTTCGCCTTCGCATGGAATCAGCTTATGTGAACACTACC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
636 bp211 aa54689+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MPKNARLNGHLDEIELGFVEREATPKLLMKLGIQLHLAGLSLSNTISILEIFGVSRARSTVHNWVHRADLQPESGRDPDHVAVDETVIRLNDEQYWLYAA
VDPETNKLLYTTLEPTTNKAIAHAFFAELREKHDVDDAVFLIDGSHSLKDACRRHSLDFRYERHGNRNSVERVFREVKRRTISFSNCFSNAEADTADDWL
RSFAFAWNQLM

 

Blast result :
Comments
ISNamo7 is 89% aa similar to ISH15.
References
1] Pfeiffer, F. (2013) Direct submission
2] Dyall-Smith, M.L., Pfeiffer, F., Oberwinkler, T., Klee, K., Rampp, M., Palm, P., Gross, K., Schuster, S.C., Oesterhelt, D. (2013) Genome Announc. 1: e0009513