ISMysp7

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NC_017904 ND Mycobacterium sp.
Mycobacterium sp. MOTT36Y
DNA section
IS Length : 1397 bp

Ends


IR Length : 23/30

IRL : GGGCGTGTCTTATTGACTGTGTAAGGGGTTCGGCCTGAATGGTGGTGGCT
IRR : GGGCTTGTCAAGATAACTGTGTAAGGTGTTGCAGCCGTTTATCTTTGGGT

Insertion site


Left flankDirect repeatRight flankDR Length
CACCGAGTTGGCCAACCTGGCAACCTCTGGTGCTGGTCTG0
CTGCGCCCGGCGCTGGCCTCCCGCGGTGTCCC8
GATGTGTTATCGGACGTTGGCCTGAACCACCC8
TGACCGCTTCGATCCCCCGATCGGGCCCAGCG8
CTTGGCCTCGGCCCCCGCGCACGCCGATCCGC8
ACGCTGGTGGTCGATCCTTCCGCTACCACTGA8
AGGGGATGGTGTGGTCCACATCGCAGGCGGTG8
TACGCAACTGGTTGACCGTGGCGACCGCGGCC8

DNA sequence

GGGCGTGTCTTATTGACTGTGTAAGGGGTTCGGCCTGAATGGTGGTGGCTGACCACCGGACAGGAGAGTTCCATTGCCGCAATCTGATTCGTCAAGAGAT
GATGCTGCCGCCCAGTTGGCCGAGTTGTTGCCGCCGGCGGCAGTCGATGCCTTGTTGGCCGACGCTGAAGCGTCTGGCACCCCGATTGATGGCCCCGAGG
GGTTGCTCGCGCAGATGACCAAGGCGGTGCTCGAACGCGCTTTGGACGTCGAAATCGCCGATCACCTGGGCTATGAGCACGGCGATCCGGCAGGGCATGG
CTCGGGCAATTCCCGTAACGGCCATGGCCGCAAAACCGTGTTGACCACGGCCGGGCCGGTCGAGCTGGAAGTGCCCCGTGACCGCAACGCCACGTTTAGC
CCGGCGATCGTGCCCAAGCGCAAACGCCGCCTGGGCCAGGTTGAGGACATGATCTTGTCGCTGTATGCCCGGGGCATGTCGACGCGCGATATCACCGAGC
ACCTCGGCGAGGTCTATGGCGCCCGCGTGTCGGCGGCCACGATTTCGCGGGTCACCGACGTGGTCACCGAGGAGATCGCCGCCTGGCAATCCCGGCCGGT
CGATCCGGTGTATCCGATCTTGTATATCGACGCGATCCGCATCAAGATCCGCGACGGCGGCGTGGTGGCCAACAAGGCCGCCCACGTGGTCATCGGCGTC
GATGTCGAGGGAATCAAGCAGGTCCTGGGCATCTGGATCCAGCAGAGCGAGGGCGCCAAATTCTGGCACGGGGTGCTCACCGAACTGCGCAATCGCGGGT
GCCGCGATGCGCTGTTCGTGTGTTGCGACGGGTTGGCCGGCCTGCCCGAATCGATCGCGGCGGTCTGGCCGGCCGCGGTGATCCAGACCTGCGTGGTGCA
TCTGCTGCGCTCCTCGATGCGTTATGCCTCCTACGCCGACCGCCGCAAGATGGCCACCGCGCTGCGTCCGATCTACACCGCACCCACCGAAGAGGCCGCC
AAACTGGCCCTCGAGGAGTTCCGCGCCCAGTGGCGCACCAAATCCCCCGGAGCCATCGCTGTCTGGGATCGGGCCTGGGCTGAGTTCGTGCCTTTCCTGG
CATTCCCGGTCGAGATCCGCAAGATCATCTACACCACCAACGCCATCGAATCGCTGAACTACCAGCTGCGCAAAGTCACCAAGGCCCGCGGCTCGTTCCC
CTCAGACGCCGCAGCAATGAAGCTGCTGTATTTGGCCATCCGCAACATCAACCAGAAACGAGGATCAACACACGGACCAGGCACCTACCGCTGGACCGAA
GCACTGAACACCTTCGCCATCCAATTCCCCGACCGACTCCCACTATGACCCAAAGATAAACGGCTGCAACACCTTACACAGTTATCTTGACAAGCCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1233 bp410 aa1161348+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAELLPPAAVDALLADAEASGTPIDGPEGLLAQMTKAVLERALDVEIADHLGYEHGDPAGHGSGNSRNGHGRKTVLTTAGPVELEVPRDRNATFSPAIVP
KRKRRLGQVEDMILSLYARGMSTRDITEHLGEVYGARVSAATISRVTDVVTEEIAAWQSRPVDPVYPILYIDAIRIKIRDGGVVANKAAHVVIGVDVEGI
KQVLGIWIQQSEGAKFWHGVLTELRNRGCRDALFVCCDGLAGLPESIAAVWPAAVIQTCVVHLLRSSMRYASYADRRKMATALRPIYTAPTEEAAKLALE
EFRAQWRTKSPGAIAVWDRAWAEFVPFLAFPVEIRKIIYTTNAIESLNYQLRKVTKARGSFPSDAAAMKLLYLAIRNINQKRGSTHGPGTYRWTEALNTF
AIQFPDRLPL

 

Blast result :
Comments
ISMysp7 is 68% aa similar to ISMgi5.
References