ISOan7

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_DS990628.1 ND Octadecabacter antarcticus
Octadecabacter antarcticus 238
DNA section
IS Length : 1387 bp

Ends


IR Length : 23/29

IRL : GAGCTATGACTGAATCTGGTGTTTGAGGGATTTGAAGGTTGGCGGCGTAT
IRR : GAGTTATTGTCAAATCTGGTGTTTGAGGGTTGTCCGTCATGCGGCGATCT

Insertion site


Left flankDirect repeatRight flankDR Length
GCAACTTGATGGTCGAAGTCACGCGTGG8

DNA sequence

GAGCTATGACTGAATCTGGTGTTTGAGGGATTTGAAGGTTGGCGGCGTATCTGGTTGATTTGTTGTTGTGAGACAGCAGCCCAACCAAAGGAGATACACA
ACCATGGGAACTACTAACATTGTTGATTTTGCGCGTCGAGACGGGATGACGGACGCGCTGACGGATTTGTTAAGAACGGGAGCCCAGCAATTGATCGCGA
CAGCAGTCGAGGCAGAGCTTGCCAGTTATCTGGCGCAATTTGCCGACTTGCGCACTGAGACAGGTCACGCAGCTGTGGTACGCAATGGGCATCATCCTGA
GCGCCCATTCCAAACTGGCATTGGCCCTGTGAGCGTGCGCATTCCAAAGGTACGATCCAAGGACGGCCAGCCCATGACATTCCGCTCGGCCCTGGTGCCA
CCCTATGTGCGTCGAACCAAGACGTTGGAAGCTGCCTTGCCATGGCTTTACCTCAAAGGCATTTCCAGCGGTGAGATGGCCCCAGCCCTCAAGGTTCTCC
TGGGCCCTGAGGCCAAGGGATTGTCAGCAAATACGGTCTCGCGCCTCAAGCGTGATTGGGCCAAGGAATACGACGGCTGGAGAGAAGCGGAACTGGACGA
CGAACCAATTGTCTACATCTGGGCGGACGGCGTTCATAGCGGCCTTCGGGGCGAAGATGACAAGCTCTGCGCCCTTGTGATTGTTGGCGTCACAGCCCGT
GGCAAGAAGCGGTTCTTGGCCATTGAGGACGGGGTGCGCGAGTCCACCCAGAGCTGGCGAGAAGTTCTGCTCAGCCTCAAAAGCCGGGGAATGAATGCCC
CAAAATTGGCGATTGGAGACGGTGCCATGGGGTTCTGGGCCGCCATGGATGAAGTCTACCCCACGGCCCGACAGCAGCGGTGCTGGCAACACAAAACGAT
GAACGTGCTCAACTGCCTGCCCAAGCTATCACAGCCAAAGGCCAAAGCGGCGATCCACAACATCTGGCAGGCTGAGACCAAAGATGATGCGGAAAAGGCG
TTCGATTTGTTCATCAAAATATATGAGCCCAAATACCCCAAGGCGACGTTGTGTCTACAAAAGGATCGGACCGAACTCATGGCATTCTTCGACTTCCCCG
CCCAACATTGGCAGAGTATCCGCACCAGCAACCCAATTGAAGCGGCGTTCGCCACGATCCGCCACCGGACCAAGCGTTCAAAAGGCTGCCTATCACGTGA
TGGCATGCTGCACGTGATGTTTAAATTGGGCCAATGCGCCGAGCAAAACTGGCGAAAACTACGCGGCTTTGATTACCTGGCCAAAGTCATCACCGGCGTC
ACATTCAAAGACGGAATCGAAGCCACAAACACAGCCCAGATCGCCGCATGACGGACAACCCTCAAACACCAGATTTGACAATAACTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1284 bp427 aa691352+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MRQQPNQRRYTTMGTTNIVDFARRDGMTDALTDLLRTGAQQLIATAVEAELASYLAQFADLRTETGHAAVVRNGHHPERPFQTGIGPVSVRIPKVRSKDG
QPMTFRSALVPPYVRRTKTLEAALPWLYLKGISSGEMAPALKVLLGPEAKGLSANTVSRLKRDWAKEYDGWREAELDDEPIVYIWADGVHSGLRGEDDKL
CALVIVGVTARGKKRFLAIEDGVRESTQSWREVLLSLKSRGMNAPKLAIGDGAMGFWAAMDEVYPTARQQRCWQHKTMNVLNCLPKLSQPKAKAAIHNIW
QAETKDDAEKAFDLFIKIYEPKYPKATLCLQKDRTELMAFFDFPAQHWQSIRTSNPIEAAFATIRHRTKRSKGCLSRDGMLHVMFKLGQCAEQNWRKLRG
FDYLAKVITGVTFKDGIEATNTAQIAA

 

Blast result :
Comments
ISOan7 is 96% aa similar to ISOan5.
References