ISAac3

  • Family IS200/IS605
  • Group IS200
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
AHGR01000003 ND Aggregatibacter actinomycetemcomitans
Aggregatibacter actinomycetemcomitans RhAA1
DNA section
IS Length : 722 bp

Ends


Left end : ATTATAGCTAGACAATGTCTAGCTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAA II struct. : Yes
Right end : CACGGTTGTTGGTTTTCACATGCCCTTTGAAGGGCATGTGAAGTACTAGGCCCTTATAGGGTAGCCTAAAAACCGCACGTTTTACGTGCGGATTGGTTTT II struct. : Yes

Insertion site


Left flankLE cleavage siteRight flankRE cleavage site
TGAGCGTCCTTTTTTGAATTTTGTtttt

DNA sequence

ATTATAGCTAGACAATGTCTAGCTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAA
TAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGT
ACCACATTGTTTTCACCCCGAAATATAGAAGAAAAGCTATTTATGGAAAGCTTAGAACGGATATAGGTAGCATATTAAGGCAATTATGCGACTATAAAAA
TGTGGAAATAATAGAAGCATGTGCAATGAAAGAGCATATTCATATGCTTATAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAG
GGAAAATCATCGTTAATGATTTTTGAAAGGCACGCAAACCTAAAATACAAATATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAG
GGCTAAATACAAAGACAGTGGAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGACCCCTTTAA
GGGGTAGGTCATAGAGTTATTTCACGGTTGTTGGTTTTCACATGCCCTTTGAAGGGCATGTGAAGTACTAGGCCCTTATAGGGTAGCCTAAAAACCGCAC
GTTTTACGTGCGGATTGGTTTT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
465 bp154 aa143607+No
ORF function : Transposase
Chemistry : Y1

ORF sequence :

MVSKANDDSSLSHTKWNCKYHIVFTPKYRRKAIYGKLRTDIGSILRQLCDYKNVEIIEACAMKEHIHMLIKIPPKLSVSSFMGYLKGKSSLMIFERHANL
KYKYGNRHFWSKGYYVSTVGLNTKTVEEYIRNQEKEDMIQDNLSKKEYVDPFKG

 

Blast result :
Comments
ISAac3 is 94% aa similar to ISAac1.
References
1] ISfinder annotation (2012)
2] Karched,M., Furgang,D., Planet,P.J., Desalle,R. and Fine,D.H. (2012) J. Bacteriol. 194 (5), 1275-1276.