ISSoEn1
- Family IS5
- Group IS903
Isoform Synonym(s) ISsope1
Accession number | Transposition | Origin | Host |
---|---|---|---|
AM921789 | ND | Primary endosymbiont | Primary endosymbiont of Sitophilus oryzae |
DNA section
IS Length : 1055 bp
Ends
IR Length : 29/35
IRL : GGCTTTGTTGAATAAATCGAACTTTTAGGTGACTGGCGGCTCTGATCACT
IRR : CGCTTTGTTGAATAAATCCGAAATTTTTGACGACTTCCTCCCTATCAGGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AGTGTAAACC | TGTTCAATAC | 0 |
DNA sequence
GGCTTTGTTGAATAAATCGAACTTTTAGGTGACTGGCGGCTCTGATCACTACATTCGTTTCCACATCAGGTCCCCATGGCAAAGCAAAAGTTTAAAATCA
CCAACTGGCCCGCATACAACAATGCGCTCAGGCAGCGGGGGGACATGACAGTATGGCTTGATGAGTCAGCCATTGCTGCATGGACTGAGAGTACACCACC
TGAACATCGTGGCCGGCCGCTTCACTACACCGATATGGCCATTACCACGGTTCTGATGATAAAGCGCGTGTTTAACCTTTCGCTCCGGGCGTTACAGGGT
TTCGTTGACGCGATTTTTAAACTGATGGGGCTGTCGTTGCGCTGCCCAGATTACTCTCTGGTCAGCCGGCGAGCAAAAACCGTCGACATCAGCATAAAAA
CGCCAACCCGCGGCGAAATCTCACACCTGGTCATCGATGGCACCGGCCTGAAAATCTTCGGCGAAGGCGAATGGAAAGTCAGGCAGCATGGGGCTGAGAG
GCGCAGAGTATGGCGCAAGCTTCATCTGGCAGTAGATAGCGCGACACATGAAATTATCTGTGCCGATTTATCGCTAAGCGGTACGACAGATGCGCAGGCG
CTGCCCGGGCTGATTAACCAAACCCACCGGAAAATCAGGGAAGCGTCGGCTGACAGTGCTTACGATACGCGTTACTGTCATGATGCTCTGCTGAGGAAAA
AAATAAAGCCGCTTATCCCACCGCGAAGTGGTGCGCAATATTGGCCAGCTCGATACCATGAGCGTAACCATGCGGTGGCAAATCAGCATCTGAGCGGCAA
TAACGATACCTGGAAAAAGAAAGTAGGTTATCACCGGCGTTCACTGGCTGAAACGGCCATGTTCCGGTTTAAAATACTTCTGGGTGGTCATCTGAGTCTG
CATGACTATGACGCGCAGGTAGGTGAGGCTATGGCAATGGTCAAAGCGCTTAACCGGATCACGTTGTTAGGAATGCCAAACAGCGTCCGCATCATGTAAC
AATCGCCCTGATAGGGAGGAAGTCGTCAAAAATTTCGGATTTATTCAACAAAGCG
CCAACTGGCCCGCATACAACAATGCGCTCAGGCAGCGGGGGGACATGACAGTATGGCTTGATGAGTCAGCCATTGCTGCATGGACTGAGAGTACACCACC
TGAACATCGTGGCCGGCCGCTTCACTACACCGATATGGCCATTACCACGGTTCTGATGATAAAGCGCGTGTTTAACCTTTCGCTCCGGGCGTTACAGGGT
TTCGTTGACGCGATTTTTAAACTGATGGGGCTGTCGTTGCGCTGCCCAGATTACTCTCTGGTCAGCCGGCGAGCAAAAACCGTCGACATCAGCATAAAAA
CGCCAACCCGCGGCGAAATCTCACACCTGGTCATCGATGGCACCGGCCTGAAAATCTTCGGCGAAGGCGAATGGAAAGTCAGGCAGCATGGGGCTGAGAG
GCGCAGAGTATGGCGCAAGCTTCATCTGGCAGTAGATAGCGCGACACATGAAATTATCTGTGCCGATTTATCGCTAAGCGGTACGACAGATGCGCAGGCG
CTGCCCGGGCTGATTAACCAAACCCACCGGAAAATCAGGGAAGCGTCGGCTGACAGTGCTTACGATACGCGTTACTGTCATGATGCTCTGCTGAGGAAAA
AAATAAAGCCGCTTATCCCACCGCGAAGTGGTGCGCAATATTGGCCAGCTCGATACCATGAGCGTAACCATGCGGTGGCAAATCAGCATCTGAGCGGCAA
TAACGATACCTGGAAAAAGAAAGTAGGTTATCACCGGCGTTCACTGGCTGAAACGGCCATGTTCCGGTTTAAAATACTTCTGGGTGGTCATCTGAGTCTG
CATGACTATGACGCGCAGGTAGGTGAGGCTATGGCAATGGTCAAAGCGCTTAACCGGATCACGTTGTTAGGAATGCCAAACAGCGTCCGCATCATGTAAC
AATCGCCCTGATAGGGAGGAAGTCGTCAAAAATTTCGGATTTATTCAACAAAGCG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
924 bp | 307 aa | 76 | 999 | + | No |
Chemistry : DDE
ORF sequence :
MAKQKFKITNWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRA
KTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRY
CHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGM
PNSVRIM
KTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRY
CHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGM
PNSVRIM
Blast result :
Comments
ISSoEn1 is 92% aa similar to ISSgl1.
References
1] ISfinder submission (2011)
2] Kelly Oakeson (2011) Direct submission
3] Gil,R., Belda,E., Gosalbes,M.J., Delaye,L., Vallier,A., Vincent-Monegat,C., Heddi,A., Silva,F.J., Moya,A. and Latorre,A.(2008) Int. Microbiol. 11 (1), 41-48.
2] Kelly Oakeson (2011) Direct submission
3] Gil,R., Belda,E., Gosalbes,M.J., Delaye,L., Vallier,A., Vincent-Monegat,C., Heddi,A., Silva,F.J., Moya,A. and Latorre,A.(2008) Int. Microbiol. 11 (1), 41-48.