ISSoEn1

  • Family IS5
  • Group IS903
MGE type ISRelated element(s) :
Isoform Synonym(s) ISsope1
Accession numberTranspositionOriginHost
AM921789 ND Primary endosymbiont
Primary endosymbiont of Sitophilus oryzae
DNA section
IS Length : 1055 bp

Ends


IR Length : 29/35

IRL : GGCTTTGTTGAATAAATCGAACTTTTAGGTGACTGGCGGCTCTGATCACT
IRR : CGCTTTGTTGAATAAATCCGAAATTTTTGACGACTTCCTCCCTATCAGGG

Insertion site


Left flankDirect repeatRight flankDR Length
AGTGTAAACCTGTTCAATAC0

DNA sequence

GGCTTTGTTGAATAAATCGAACTTTTAGGTGACTGGCGGCTCTGATCACTACATTCGTTTCCACATCAGGTCCCCATGGCAAAGCAAAAGTTTAAAATCA
CCAACTGGCCCGCATACAACAATGCGCTCAGGCAGCGGGGGGACATGACAGTATGGCTTGATGAGTCAGCCATTGCTGCATGGACTGAGAGTACACCACC
TGAACATCGTGGCCGGCCGCTTCACTACACCGATATGGCCATTACCACGGTTCTGATGATAAAGCGCGTGTTTAACCTTTCGCTCCGGGCGTTACAGGGT
TTCGTTGACGCGATTTTTAAACTGATGGGGCTGTCGTTGCGCTGCCCAGATTACTCTCTGGTCAGCCGGCGAGCAAAAACCGTCGACATCAGCATAAAAA
CGCCAACCCGCGGCGAAATCTCACACCTGGTCATCGATGGCACCGGCCTGAAAATCTTCGGCGAAGGCGAATGGAAAGTCAGGCAGCATGGGGCTGAGAG
GCGCAGAGTATGGCGCAAGCTTCATCTGGCAGTAGATAGCGCGACACATGAAATTATCTGTGCCGATTTATCGCTAAGCGGTACGACAGATGCGCAGGCG
CTGCCCGGGCTGATTAACCAAACCCACCGGAAAATCAGGGAAGCGTCGGCTGACAGTGCTTACGATACGCGTTACTGTCATGATGCTCTGCTGAGGAAAA
AAATAAAGCCGCTTATCCCACCGCGAAGTGGTGCGCAATATTGGCCAGCTCGATACCATGAGCGTAACCATGCGGTGGCAAATCAGCATCTGAGCGGCAA
TAACGATACCTGGAAAAAGAAAGTAGGTTATCACCGGCGTTCACTGGCTGAAACGGCCATGTTCCGGTTTAAAATACTTCTGGGTGGTCATCTGAGTCTG
CATGACTATGACGCGCAGGTAGGTGAGGCTATGGCAATGGTCAAAGCGCTTAACCGGATCACGTTGTTAGGAATGCCAAACAGCGTCCGCATCATGTAAC
AATCGCCCTGATAGGGAGGAAGTCGTCAAAAATTTCGGATTTATTCAACAAAGCG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
924 bp307 aa76999+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAKQKFKITNWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRA
KTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRY
CHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGM
PNSVRIM

 

Blast result :
Comments
ISSoEn1 is 92% aa similar to ISSgl1.
References
1] ISfinder submission (2011)
2] Kelly Oakeson (2011) Direct submission
3] Gil,R., Belda,E., Gosalbes,M.J., Delaye,L., Vallier,A., Vincent-Monegat,C., Heddi,A., Silva,F.J., Moya,A. and Latorre,A.(2008) Int. Microbiol. 11 (1), 41-48.