ISAcra1

  • Family IS1595
  • Group IS1016
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
JQ326202.1 ND Acinetobacter radioresistens
Acinetobacter radioresistens 1474
Acinetobacter sp. NIPH 899
Acinetobacter radioresistens NIPH 2130
Acinetobacter sp. 272263
Acinetobacter sp. NIPH 2036
Acinetobacter sp. CIP 102136
Acinetobacter sp. 1294596
DNA section
IS Length : 732 bp

Ends


IR Length : 15

IRL : GGCTCTAGACTAGCAAAATGATTATGTTAGTCTAGAATCATGATAGAAAA
IRR : GGCTCTAGACTAGCAGATTTACACTTAATTTTACCTAATGAGGTTCCACA

Insertion site


Left flankDirect repeatRight flankDR Length
TCCGGCAGAAATATAATTTGGTTTAAT7

DNA sequence

GGCTCTAGACTAGCAAAATGATTATGTTAGTCTAGAATCATGATAGAAAACAGTAAATTAAGTCACTACAAGATTAAAAAAATTATTCAATGCTTTTGTG
TTGATATTCCTGCTTCCAAAACAGCCTTATTACTCAATTTAAATCGTAATACGATTAACTATTGGTACATGCTTTTTAGAGAAACTATCTATGATCATCA
AACAGATTTAAGAGCTAAGTTTGTTGGTTCAATAGAAGTAGATGAAAGCTATTTTGGAGCGAAAAGGCAACGTGGGTTTCATGGAAAGTTAAAGCGTGGT
CGTGGGACTCTAAAACAGCCAGTATTTGGAATATTCGAACGTAATGGGCGCGTCTATACTGAAATCGTACCTGACTGTAAAATGAAGACTTTACAAGAGG
TTATCATTGGTAAAGTTTCACTTGAGAGTGTGATTTATAGTGATGGATGGCGTGGCTATAATGGTCTTGTTGATGTGGGTTATTCAAAGCATTTTAGGGT
AAATCACGGAGCAAATGAGTTTGCTAGAGGAGAATGTCATATAAATGGAATAGAATCATTTTGGAGCTTTTGTAAAAGAAGGCTAGCAAAGTTTAACGGC
ATATCAAAAGAGTACTTTGATTATCATCTTAAAGAAACTGAATGGCGTTGGATGAGGGAACCTAATGAGTTAGCAACTGAGCTGTGGAACCTCATTAGGT
AAAATTAAGTGTAAATCTGCTAGTCTAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
663 bp220 aa40702+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MIENSKLSHYKIKKIIQCFCVDIPASKTALLLNLNRNTINYWYMLFRETIYDHQTDLRAKFVGSIEVDESYFGAKRQRGFHGKLKRGRGTLKQPVFGIFE
RNGRVYTEIVPDCKMKTLQEVIIGKVSLESVIYSDGWRGYNGLVDVGYSKHFRVNHGANEFARGECHINGIESFWSFCKRRLAKFNGISKEYFDYHLKET
EWRWMREPNELATELWNLIR

 

Blast result :
Comments
ISAcra1 is 66% aa similar to ISFtu3.
References
1] Paul G. Higgins (2011) Direct submission