ISEc37
- Family IS91
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FJ914220 | ND | Escherichia coli | Escherichia coli 80 plasmid pECTm80 |
DNA section
IS Length : 1828 bp
Ends
oriIS : CGAGTAGGCAGCCTGACGGCTGCGGCTTGTCATGGTCTGCAATTACCGTTATAAAAACAGGCAATGTCATTGTCTTTCAGGTGGTTATATGGCCCGTTCA II struct. : No
terIS : TTTAATCGTCGGTTCCGTTCATATGAGCAAAAGTGGTGTTGAAGAAACATCCGTTTTGTGATGTTTTTTTAATCTTTTTGGGGTTTTAATTCCTATCGAT II struct. : No
Insertion site
Left flank | LE cleavage site | Right flank | RE cleavage site |
---|---|---|---|
TCGGACAGAC | GAACCGTTTT |
DNA sequence
CGAGTAGGCAGCCTGACGGCTGCGGCTTGTCATGGTCTGCAATTACCGTTATAAAAACAGGCAATGTCATTGTCTTTCAGGTGGTTATATGGCCCGTTCA
GCTAAACCCCGTAAACGTAAACCCGCCTCTCAAAGAAGCAAACTTCCCCGCTATGTCGTGAAGCTTCACGAAGATGATTTTTTTGACGAAGAAGACGCAG
AAGTTCTGCGCTTTGATAGTTTTGACGATGCCGTTGAATGCTGAGCAGACCTGAATATTCCGTTCTTTGTGGATGCGGGAAACAAAAAGCTGGTCTTCTG
GTTTGTTCGTGTCGATGACGAAGGGTATCCGGAAATCGCCCGCTGTACGGAGCGGAAGTTTGCAACCATTCTTGCCGGTATCAGTGCCGGTGGTATGTAC
TGCCCGGAATGCGGCACAGTTCACTGGCCGGATGGCGTTACCCCACCCGTCTGATGCTTCCCCGTTTTGCCGATATTTTTCAGCAGGGTAACCGCTGGCT
TAACTGGCTGGAGAAACAGCCGGAAGGTTCAGTGCGTCCGGTGGTGACTGAGTCAGTGACAAAAATCATGGCATGCGGGACCACGCTGATGGGCTACACG
CAATGGTGCTGTTCATCACCGGACTGTTGCCACACAAAAAAGGTCTGCTTCCGGTGTAAAAGTCGCTCCTGCCCGCACTGCGGAGTGAAGGCTGGCGCAC
AGTGGATACAGTATCTGCTGAGTCTGCTCCCCGACTGCCCGTGGCAGCATATTGTGTTCACACTTCCCTGCCAGTACTGGCCCCTGGTGTTCCACAACAG
GTGGTTACTGGCAGAGATGAGCCGCATTGCTGCGGATGTGATACTGGAAATCTGCCGCCAGGCAGATGTGGAGCCGGGGATATTCATGGTGATCCACACA
TGGGGGCGTGACCAGCAGTGGCATCCGCATATCCATTTATCGACAACTGCCGGTGGTGTGACGTCGGGCCACACCTGGAAAAATCTTCATTTTTACGCCC
GTAAGGTGATGAGCATGTGGCGCTACCGGATAACACGGTTGCTGTCACGGAAATACCCTGACCTGGTGATGCCGGATGCGCTGGCAGCAGAAGGAAGCAG
TAAACGGGAATGGAATCGCTTCCTGGACACGCATTACCGCCGTGGCTGGAATGTCAACGTATCCCGGGTGATGGATAATGCCACCCATGTGGCGGTGTAC
TTTGGCTCTTACCTGAAAAAGCCACCGGTGCCGATGAGTCGTCTGGAGCATTATGCCGGTCAGGATGAAATCGGTCTGCGTTACAACAGTCACCGAACAA
AACGGGAAGAATACCTGTTGATGAGTGGAGATGAGTTCATGGAAAGGTTCTCCTGGCATGTGGCGGATAAGGGGTTCCGTATGGTGAGGTACTACGGTTT
TTTGAGTCCGGCGAAACGGCGGTTACTGGAAGAAGTGGTGTACATCATAACGGAGACAGTGAGAAAAACGGCGATGCAAATCACCTGGAGAGGGATGTAT
CAGAGGTTACTGAAGGTTGACCCGCTGAAGTGCGTGCTGTGCGGGAGTCAGATGCGTTTTACGGGGCTGAAGCGGGGCTACCGTCTGGCAGAGCTGGTCC
TGATGCATGAGCCGCTGGCCCGGATGCGGTGGTGCGGCTGAGAGCCGCAGAGGGTAAGTAGCGTCCATTTTGAGGGAAACGGAGCAAAAAACCGCCATTC
ATACCCTGAATCAATCAGAGCCATCCAGTTTAATCGTCGGTTCCGTTCATATGAGCAAAAGTGGTGTTGAAGAAACATCCGTTTTGTGATGTTTTTTTAA
TCTTTTTGGGGTTTTAATTCCTATCGAT
GCTAAACCCCGTAAACGTAAACCCGCCTCTCAAAGAAGCAAACTTCCCCGCTATGTCGTGAAGCTTCACGAAGATGATTTTTTTGACGAAGAAGACGCAG
AAGTTCTGCGCTTTGATAGTTTTGACGATGCCGTTGAATGCTGAGCAGACCTGAATATTCCGTTCTTTGTGGATGCGGGAAACAAAAAGCTGGTCTTCTG
GTTTGTTCGTGTCGATGACGAAGGGTATCCGGAAATCGCCCGCTGTACGGAGCGGAAGTTTGCAACCATTCTTGCCGGTATCAGTGCCGGTGGTATGTAC
TGCCCGGAATGCGGCACAGTTCACTGGCCGGATGGCGTTACCCCACCCGTCTGATGCTTCCCCGTTTTGCCGATATTTTTCAGCAGGGTAACCGCTGGCT
TAACTGGCTGGAGAAACAGCCGGAAGGTTCAGTGCGTCCGGTGGTGACTGAGTCAGTGACAAAAATCATGGCATGCGGGACCACGCTGATGGGCTACACG
CAATGGTGCTGTTCATCACCGGACTGTTGCCACACAAAAAAGGTCTGCTTCCGGTGTAAAAGTCGCTCCTGCCCGCACTGCGGAGTGAAGGCTGGCGCAC
AGTGGATACAGTATCTGCTGAGTCTGCTCCCCGACTGCCCGTGGCAGCATATTGTGTTCACACTTCCCTGCCAGTACTGGCCCCTGGTGTTCCACAACAG
GTGGTTACTGGCAGAGATGAGCCGCATTGCTGCGGATGTGATACTGGAAATCTGCCGCCAGGCAGATGTGGAGCCGGGGATATTCATGGTGATCCACACA
TGGGGGCGTGACCAGCAGTGGCATCCGCATATCCATTTATCGACAACTGCCGGTGGTGTGACGTCGGGCCACACCTGGAAAAATCTTCATTTTTACGCCC
GTAAGGTGATGAGCATGTGGCGCTACCGGATAACACGGTTGCTGTCACGGAAATACCCTGACCTGGTGATGCCGGATGCGCTGGCAGCAGAAGGAAGCAG
TAAACGGGAATGGAATCGCTTCCTGGACACGCATTACCGCCGTGGCTGGAATGTCAACGTATCCCGGGTGATGGATAATGCCACCCATGTGGCGGTGTAC
TTTGGCTCTTACCTGAAAAAGCCACCGGTGCCGATGAGTCGTCTGGAGCATTATGCCGGTCAGGATGAAATCGGTCTGCGTTACAACAGTCACCGAACAA
AACGGGAAGAATACCTGTTGATGAGTGGAGATGAGTTCATGGAAAGGTTCTCCTGGCATGTGGCGGATAAGGGGTTCCGTATGGTGAGGTACTACGGTTT
TTTGAGTCCGGCGAAACGGCGGTTACTGGAAGAAGTGGTGTACATCATAACGGAGACAGTGAGAAAAACGGCGATGCAAATCACCTGGAGAGGGATGTAT
CAGAGGTTACTGAAGGTTGACCCGCTGAAGTGCGTGCTGTGCGGGAGTCAGATGCGTTTTACGGGGCTGAAGCGGGGCTACCGTCTGGCAGAGCTGGTCC
TGATGCATGAGCCGCTGGCCCGGATGCGGTGGTGCGGCTGAGAGCCGCAGAGGGTAAGTAGCGTCCATTTTGAGGGAAACGGAGCAAAAAACCGCCATTC
ATACCCTGAATCAATCAGAGCCATCCAGTTTAATCGTCGGTTCCGTTCATATGAGCAAAAGTGGTGTTGAAGAAACATCCGTTTTGTGATGTTTTTTTAA
TCTTTTTGGGGTTTTAATTCCTATCGAT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1188 bp | 395 aa | 454 | 1641 | + | No |
Chemistry : Y2
ORF sequence :
MLPRFADIFQQGNRWLNWLEKQPEGSVRPVVTESVTKIMACGTTLMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLLPDCPWQHI
VFTLPCQYWPLVFHNRWLLAEMSRIAADVILEICRQADVEPGIFMVIHTWGRDQQWHPHIHLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRK
YPDLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDEFMERFS
WHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAELVLMHEPLARMRWCG
VFTLPCQYWPLVFHNRWLLAEMSRIAADVILEICRQADVEPGIFMVIHTWGRDQQWHPHIHLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRK
YPDLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDEFMERFS
WHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAELVLMHEPLARMRWCG
Blast result :
Comments
IS91 is located on a 21.4 kilobase antibiotic resistance plasmid from an ? hemolytic Escherichia coli O108:H- human clinical isolate.
ISEc37 is 97% aa similar to IS91.
ISEc37 is 97% aa similar to IS91.
References
1] Dawes, F.E. (2011) Direct submission
2]Dawes,F.E., Bulach,D.M., Kuzevski,A., Bettelheim,K.A., Djordjevic,S.P. and Walker,M.J. (2009) Direct submission to GenBank
2]Dawes,F.E., Bulach,D.M., Kuzevski,A., Bettelheim,K.A., Djordjevic,S.P. and Walker,M.J. (2009) Direct submission to GenBank