ISAzs25
- Family IS1380
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_013856 | ND | Azospirillum sp. | Azospirillum sp. B510 plasmid pAB510b |
DNA section
IS Length : 1614 bp
Ends
IR Length : 16/20
IRL : CCGGGATTATGCACCGGGGTTGGCGGGTGTAGCGCAAGCCGTTGAACAGG
IRR : CCGCCTTTATGCACCTGGGTGAATCGTCATTTGGCCGCTGAATGGGGATG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| GATACGGCGAGTGCTAA | CTAGCCGGGAAAATTCATG | 0 |
DNA sequence
CCGGGATTATGCACCGGGGTTGGCGGGTGTAGCGCAAGCCGTTGAACAGGCATAGGATTTGGGTGCTGAAGCCAATCCCCTCCGTATCGGGAGCGCCCAC
CCGCCATGGTTGATCCTACGCTGCCGTTGCCCAGCTTGTCACCGGTTGCCGACAAGGCCGTCGTCGGGCGCTTCGATGGTGGCCGCCTGTCCTGCGATGG
CGGACTTCTGGTGCTGCGCGAAGTGGAAAAGCGGCTGCGCGTGGCCGAGCGTCTGGCCGGCAGCATCGAGGACCCGCGCGATCCGGTGCGCACCACGCAT
TCCCTGGCCGATATCATCGGCTTCCGCCTGCTGGCCATCGCGGCGGGCTACGAGGACGGCAACGACGCTGACGATCTGCGCGCCGATCCGCTGTTCAAGC
TGGCCCTGGACCGGTTGCCGTCGGAGCGCGACCTGTGCTCCCAATCTACCATCTCGCGGCTGGAGAACCTGCCCGACCCCCGCGCGCTGCTGCGCATGGG
GCGGGCCATGGTCGATCTCTACTGCGCTTCGTTCCGTCAGGTGCCCAAGCGCATCGTGCTGGACGTGGACGACACCTTCGACACCGTGCACGGTGATCAG
CAGTTGCGCCTGTTCAACGCTCATTATGACGAGTACGGCTTCCAGCCCATGGTCGTCTTCGACGGCGATGGGCGCTTCGTCACCGCCGTGCTGCGCCCGG
CCAAGCGGCCCAAGGGTACAGAGATCCGGGCCTTCCTGCGCCGTCTGCTCCGCGCCATCCGGGCGAACTGGCCCAGGACCGAGATCCTGCTGCGCGCTGA
CGGCCACTACGCCTGCCCCGAGGTTCTGGACTGGTGTGAGGCCGAGGGCCTCGACTACATTCTGGGCCTGCCGACCAGCAGCACGCTGCGCCGTCACGTC
ACCACGCTGGAGGTCAGCACCGCTGCCCGCTTCCAGGCCATGCCGGGGACCGACAAGCTGCGTCGCTTCAAGGAATTCTACGACGGCGCCGGCACCTGGA
GCCGGGTCCGCCGCATCGTCGCGCGGGTCGAGGCCGGCCCCCAGGGCACCGACACCCGTTTCATCGTCACCAATCTACGCCACGGGACCGGACGCGCTCT
GTACGAGGGCGTGTACTGCGCCCGCGGCCAAGCCGAGAACCACATCAAGGCCTGGAAAGCCCACCTCGCGGCCGACCGCACCTCCTGCACGAAAGCGACC
GCCAACCAGTTCCGCCTGTTCCTGCACGCCGGGGCCTACTGGCTGCTGTGGAGCCTGCGCTCGCTGATGCCCAAACGCTCCCGCTGGCGGGTCGCCCAGT
TCGACACCCTGCGGCTGCGCATGGTGAAGATCGCCGCGCGCATCATCGAGAGGAAGACGCGCATCACGGTCCACCTGCCGAGTGCCGCGCCCGATCAGGC
GATCGTTCATCTCGCCCTCGGCCGCCTGCCTCGGCTCATCTCCTGACCACAGGGGCAACTGCCCCAGCCGTCACTCCATCCCATCAACCACTAAACCCAC
ACCCATCAAAACACCGCCATCAGCGCGGCGTCGACGGCGTGCACCTTCGCAACCTCCCGATGAACATCCCCATTCAGCGGCCAAATGACGATTCACCCAG
GTGCATAAAGGCGG
CCGCCATGGTTGATCCTACGCTGCCGTTGCCCAGCTTGTCACCGGTTGCCGACAAGGCCGTCGTCGGGCGCTTCGATGGTGGCCGCCTGTCCTGCGATGG
CGGACTTCTGGTGCTGCGCGAAGTGGAAAAGCGGCTGCGCGTGGCCGAGCGTCTGGCCGGCAGCATCGAGGACCCGCGCGATCCGGTGCGCACCACGCAT
TCCCTGGCCGATATCATCGGCTTCCGCCTGCTGGCCATCGCGGCGGGCTACGAGGACGGCAACGACGCTGACGATCTGCGCGCCGATCCGCTGTTCAAGC
TGGCCCTGGACCGGTTGCCGTCGGAGCGCGACCTGTGCTCCCAATCTACCATCTCGCGGCTGGAGAACCTGCCCGACCCCCGCGCGCTGCTGCGCATGGG
GCGGGCCATGGTCGATCTCTACTGCGCTTCGTTCCGTCAGGTGCCCAAGCGCATCGTGCTGGACGTGGACGACACCTTCGACACCGTGCACGGTGATCAG
CAGTTGCGCCTGTTCAACGCTCATTATGACGAGTACGGCTTCCAGCCCATGGTCGTCTTCGACGGCGATGGGCGCTTCGTCACCGCCGTGCTGCGCCCGG
CCAAGCGGCCCAAGGGTACAGAGATCCGGGCCTTCCTGCGCCGTCTGCTCCGCGCCATCCGGGCGAACTGGCCCAGGACCGAGATCCTGCTGCGCGCTGA
CGGCCACTACGCCTGCCCCGAGGTTCTGGACTGGTGTGAGGCCGAGGGCCTCGACTACATTCTGGGCCTGCCGACCAGCAGCACGCTGCGCCGTCACGTC
ACCACGCTGGAGGTCAGCACCGCTGCCCGCTTCCAGGCCATGCCGGGGACCGACAAGCTGCGTCGCTTCAAGGAATTCTACGACGGCGCCGGCACCTGGA
GCCGGGTCCGCCGCATCGTCGCGCGGGTCGAGGCCGGCCCCCAGGGCACCGACACCCGTTTCATCGTCACCAATCTACGCCACGGGACCGGACGCGCTCT
GTACGAGGGCGTGTACTGCGCCCGCGGCCAAGCCGAGAACCACATCAAGGCCTGGAAAGCCCACCTCGCGGCCGACCGCACCTCCTGCACGAAAGCGACC
GCCAACCAGTTCCGCCTGTTCCTGCACGCCGGGGCCTACTGGCTGCTGTGGAGCCTGCGCTCGCTGATGCCCAAACGCTCCCGCTGGCGGGTCGCCCAGT
TCGACACCCTGCGGCTGCGCATGGTGAAGATCGCCGCGCGCATCATCGAGAGGAAGACGCGCATCACGGTCCACCTGCCGAGTGCCGCGCCCGATCAGGC
GATCGTTCATCTCGCCCTCGGCCGCCTGCCTCGGCTCATCTCCTGACCACAGGGGCAACTGCCCCAGCCGTCACTCCATCCCATCAACCACTAAACCCAC
ACCCATCAAAACACCGCCATCAGCGCGGCGTCGACGGCGTGCACCTTCGCAACCTCCCGATGAACATCCCCATTCAGCGGCCAAATGACGATTCACCCAG
GTGCATAAAGGCGG
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1341 bp | 446 aa | 106 | 1446 | + | No |
Chemistry : DDE
ORF sequence :
MVDPTLPLPSLSPVADKAVVGRFDGGRLSCDGGLLVLREVEKRLRVAERLAGSIEDPRDPVRTTHSLADIIGFRLLAIAAGYEDGNDADDLRADPLFKLA
LDRLPSERDLCSQSTISRLENLPDPRALLRMGRAMVDLYCASFRQVPKRIVLDVDDTFDTVHGDQQLRLFNAHYDEYGFQPMVVFDGDGRFVTAVLRPAK
RPKGTEIRAFLRRLLRAIRANWPRTEILLRADGHYACPEVLDWCEAEGLDYILGLPTSSTLRRHVTTLEVSTAARFQAMPGTDKLRRFKEFYDGAGTWSR
VRRIVARVEAGPQGTDTRFIVTNLRHGTGRALYEGVYCARGQAENHIKAWKAHLAADRTSCTKATANQFRLFLHAGAYWLLWSLRSLMPKRSRWRVAQFD
TLRLRMVKIAARIIERKTRITVHLPSAAPDQAIVHLALGRLPRLIS
LDRLPSERDLCSQSTISRLENLPDPRALLRMGRAMVDLYCASFRQVPKRIVLDVDDTFDTVHGDQQLRLFNAHYDEYGFQPMVVFDGDGRFVTAVLRPAK
RPKGTEIRAFLRRLLRAIRANWPRTEILLRADGHYACPEVLDWCEAEGLDYILGLPTSSTLRRHVTTLEVSTAARFQAMPGTDKLRRFKEFYDGAGTWSR
VRRIVARVEAGPQGTDTRFIVTNLRHGTGRALYEGVYCARGQAENHIKAWKAHLAADRTSCTKATANQFRLFLHAGAYWLLWSLRSLMPKRSRWRVAQFD
TLRLRMVKIAARIIERKTRITVHLPSAAPDQAIVHLALGRLPRLIS
Blast result :
Comments
ISAzs25 is 94% aa similar to ISAzs3.
References
1] ISfinder annotation (2011)
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.