ISAzs17
- Family Tn3
- Group
Isoform Synonym(s) TnAzs17
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_013854 | ND | Azospirillum sp. | Azospirillum sp. B510 |
DNA section
IS Length : 7252 bp
Ends
IR Length : 36
IRL : GGGGTCACTACACGAAAGTGATCAGATTGTCCGGGATCTGAGAACAGCCT
IRR : GGGGTCACTACACGAAAGTGATCAGATTGTCCGGGAAGTGGGAACGGAAA
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| GCGCCGCCTGCAC | GAGGT | GCTGCGCGGTCAGGGA | 5 |
DNA sequence
GGGGTCACTACACGAAAGTGATCAGATTGTCCGGGATCTGAGAACAGCCTGAGAACATGAGCCGTGCAGCGATCCTGTGCCGGCTGCTTGCCTCGCAAAA
CTCTTGAGTTTCGCGACAGGTAGGTACCGGACTGGAACCTTGGAGTTTTTGATGTTGCAAAAGTCTATCGCAAAAGGAAAGAGTTTCGCGATGACTTTTG
CGACGGATGCCCCATGCTCATCGGCTATGCGCGCGTCTCCACCGACGACCAGGATCTTTCGCAGCAGCGGGCGTCGCTACAGGCGGTCGGCTGTCGGCGG
ATTTATGAGGAGAAGGTCTCCGGGGCAAAGCGCGACCGGCCACAGCTTGCCCGGCTGATCGACCAACTCCGGGCCGATGACGTTGTGACGGTCACGCGCC
TCGACAGGCTGGCCCGGTCAACCCGTGATCTTCTCGATATTGCGGAGCAGCTCCAGGGAGCCGGTGCGGGTCTCCGATCACTCGCGGAGCCATGGGCCGA
TACCACCTCGCCGGCCGGGCGGATGGTCCTAACCGTGTTCGCCGGCATCGCCGAGTTCGAGCGCTCCCTGATCGCCGAGCGGACCGGCATGGGCCGCGTG
GCGGCCAGAGCACGCGGCGTGCGGTTCGGCCGGCCGCCGAAGTTGACCGCCGACCAGATCGCTCTCGCTCGGCGCCTGGTCGATGAAGGCCGATCCCCCC
GGGAGGCAGCCCGGATTCTCAACGTCCACGCATCGACGCTGTACCGGGCCTTTGCACTCCAGCCCCCCGAGGTTGCTGGCTCAGGTCCCTAACCGGGCTA
TGTCAGATTTCGTTCCTTTGCTACTCGATCTTCGACCAGCCCCTGCCGAAATGCCGTCATGCTGTCTTCTCACCGCTCATCGCAGCGGCGGCCAGGGCCT
GCGCCTCGGTTGCCGCCTTCAGCCCCGCCTCGCGGCGCTCGCTGTAGCGGTCGGTCAGGTAGTCGCTGCGGTCGCGCACCAGCAGAGTGAACTTCATCAG
TTCCTCCATCACGTCCACCACGCGGTCGTAATAGGGCGACGGCTTCATCCGCCCGGCCTCGTCGAACTCCTGGAAGGCCTTGGCCACCGACGACTGGTTC
GGGATGGTCACCATCCGCATCCAGCGGCCTAGCACCCGCATCGCGTTGACCGCATTGAAGGATTGCGAGCCGCCGGAGACCTGCATCACCGCCAGCGTCC
GCCCCTGCGTCGGCCGGACGCCGCCGCTTTCCAGCGGCAGCCAGTCGATCTGGCATTTCAGGATGCCGGTGATGGTGCCGTGCCGCTCCGGGCTGACCCA
AACCTGGCCTTCCGACCATTGCGACAGGGCGCGCAGCTCCGCCACCTTGGGATGGTCGGCCGGCACGCTGTCCGGCAGCGGCAGGTCGCGCGGGTCGAAG
ATGCGCGTCTCGGCCCCCATGCGCTGGAGCAGCCGGGCGGCTTCCTCGGCCAGGAAGCGGCTGTAGGACCGCTCCCGCAGCGAGCCATAGAGCAGCAGGA
TGCGCGGCGGGTGGGTCGACGGCCGCTCCGGTGTCAGCCTGTCGAGGCCGGGCACATCGAAATAAGGCTCGTCCAGGCTCGGCAAGGAGTCGCGTCCGGT
CGTCTCGATATCATGCATGGGTGCGTCCCTCGTACCAGGGCTTGGTCGCCTTGACGATCTTCACCACAGACAGCATCACCGGCACCTCGACCAGCACGCC
GACCACGGTGGCGAGCGCCGCCCCGGAGCCCAAACCGAACAGGCTTATGGCGGCGGCGACCGCCAGCTCGAAGAAGTTGGAGGCGCCGATCAGCGCCGCC
GGCGCTGCCACGCACCACGCCACGCCGAAGCGGCGCGACAGCCAATAGGCCAGCCCGGCGTTGAAATAGACCTGGATCAGGATCGGCACCGCCAGCAGCA
GGATGACCAGCGGCTGGGCGAGGATCTGCTCGCCCTGGAAGCCGAACAGCAGCACCAGCGTGGTCAGCAGCGCCAGCAGCGAAACCGGCTGGATGAGGTC
GAGCACGCGCTTCAGCGCCGGCTCTCCGCCGGCGACCAGCAGGCTGCGCCGCCAGAGCTGGGCACCGACCACGGGGATGACGATGTAGAGCAGCACCGAC
AGCAGCAGCGTGTCCCACGGCACGGTGATCGACGCCACGCCCAGCAGCAGGCCGACCAGCGGCGCGAAAGCGAAGACCATGATGATGTCGTTCAGCGCCA
CCTGGCTCAGCGTGTAGTGCGGCTCCCCCTCACACAGGTTCGACCAGACGAACACCATGGCGGTGCAGGGCGCCGCCGCCAGCAGGATCAGGCCGGCAAC
GTAGGAGGAAATCTGGTCCTGCGGCAGCAGCGGCGCGAACAGGTTGCCGATGAACAGCGTGCCCAGCAGCGCCATCGAGAAGGGCTTGACCGCCCAGTTG
ATGAACAGCGTCACCCCAACGCCGCGCCAGTGCTCCTTGACCTGCCCCAGCGCGCCGAGGTCGATCTTCAGCAGCATCGGCACGATCATCAGCCAGATCA
GCACCGCCACCGGCAGGTTGACCTTGGCGACCTCGGCCGCGGCGATCGTCTGGAACAGGCCGGGCACCAGATGGCCGAGCGCGATGCCGGCGACGATGCA
CAGCGCTACCCAGACGCTGAGATAGCGCTCGAACGGGCCCATGGCGGGGCGGGCCGCCGGGGCGGCATGAATGTCAGCGGTCATGATGCGTGTCCGTCAG
GAGGCTTTGCCGATGCGGTGTCCGGCGGCGTCGACGACCTGCTCCCCGTCTTCCTTGGCGAAGGCGCCGCGCTGGGCATCGGGGAGGATGTCGAGCACCG
CCTCGGACGGGCGGCACAGCCGCACGCCGAGCGGCGTCACCACGATCGGCCGGTTGATCAGGATCGGATGGGCCATCATGGCGTCGAGCAGTTGGTCGTC
GCTCAACGACGGGTCGGCGAGCCCGGGTTCGGCATAGGGCGTGCCCTTCTCGCGCAGCACGGCGCGCACCGGCACGCCCATGCGGCCGATCAGGTCGGCC
AGCTCGTCACGCGACGGCGGTGTCTTCAGATACTCGATCACCGTCGGCTCGACGCCGCTGTTGCGGATCAGCGCCAGCGTGTTGCGCGAGGTGCCGCAAT
CCGGGTTGTGGTAGATGGTCACCGATGTCATCGCGCCGCCTCCGTGGTGGCGGACGCCTTCCCCATGTCGTCCAGCTTGCGCTTCAGCGCCAGACGGTCG
AGCGAGGCGATGGGCAGGGCGGTGAAAGCCTGGATGCGGCGCTGGATCTGTCCGAACACCGTGGCGGTGAAGGCGGCCTTCTCCGCGTCGCTGCCCTGGG
CAGTCGACGGGTCTGGGAAGCCCCAGTGCGCCGTCATCGGCTGGCCGGGCCACACCGGGCAGACCTCGCCGGCGGCGTTGTCGCAGACGGTGAAGACGAA
GTCCATGTGCGGCGCGTCCGCTGCGGCGAACTCGTCCCAGGTCTTGGAGCGCAGCTCGGCGGTCGGGAAGCCCAGCCGCTCCAGCAGGTCATGGACATAG
GGATTGATGCGGCCGGACGGCTGGCTGCCGGCGCTGAAGCCGCGGAAGCGGCCCTTGCCATCGCGGTTCAGCAGGCACTCCGCCATGACGCTGCGGGCGC
TGTTGTGGGTGCACAGGAACAGGACGTTGTAGACGCGGTCGGTCATCGCTGGATTGCCTTTCCGGGCCGCGGGATGCGGCGGTTGGGATCGGGGCCTCAG
GCGTCGTGGTCACATCCGTCGGGACCACATGGAACGGCCTGGGGGAGGTCGGCGGAGCAGAGTTCGGGGCGGCCCTGGCAGCAGTCCTCCATCAGGAAGG
CGATCAGCCGGCGGGTGCCCTCATAGTCGGACGCGTAGAAGATCTGCCGCTGCACCCGCCAGGAGCGGAGCAGGCCGGCGCGTTCCAGCGTCGCCAGATG
ATGGGACAGGGTGGAGGCCGGAACCCCCACCTGCTGGGCAACCTCGCCTGCCGTCAACCCGTTCGGCCCCACCGTGATCAGCAGGCGGAACACGGCCAGA
CGGGTTTCCTGGGCGAGAGCGGCAAAGGCGTCGACGGCAATCTTGTTTTCCATTATTCGACGATAGTCGAATTATCGATTTGAGGCAATCAGCAGTTTTG
CGCGCCATGCGGTGAGGGGACGCGGGAAAACCGGAAGCAGCGCCTCCGACAGCTCACCCCGTGACAGCCTTGGACCCGCATCACTATTCTCCCCCGAAAA
CGAAGCGATGGGGGATTGGAAGAATGGCGCGTCGGCGGCTGTTGACCGAAGACCAGTGGGCAAGCCTCCTGGCAGTGCCGGACGACGAACGCGCGATGGT
GCGCCACTATACGCTCAGCAGGGACGATCTCGACATCGTCACCCTCCGGCGTACGGCGCACACCCGCCTGGGCTGTGCCATTCTGCTCTGTTATCTCCAT
CATCCTGGGCGGATTCCTGGACCGGACGAGCGCCCGCCCATGGCGCTGCTGGTGTTCGTCGCCCGGCAGGTGGGCGCCGAGCCTGACGATTTCATCGCCT
ACAGTCGACGTGACCAGAACCGGCGCGAGCAGGTTGCCGCGATCATGGCACGGACCGGCCACCGTGCCTTTGATCGAACCCTCTTTCGCGACCTTGCCGC
CTGGCTGACCTCCAAGGCACAGATCGCACGGGACCCGATCATTCTGGCGACCACCTTGATCGATGAGTTCCGTCGCCGTCGCATCCTGATCCCTTCTGCG
GCGATCCTGGAACTGATGCTCCATCAGGCTCGGGGCCGGGCCGAACGGGTTCTGCACCGTGCCCTTGTCGATGGTGTCGACCAGCGGACAACCGACGCGC
TGGACCGATTGCTGACCCTGCAGGCCGACACCGAAACGACCATGCTCGCTTGGTTGCGCCGGGTGCCGGCGGCTCCAACCGCCCGCAACATGCTGGCGGT
CATTGAGCGCCTTTCCACCTTGAAGGAACTCGGCATCGACCGGTCGTTGCGCGCTCGCGTGCCGGAGGTCGCGTTCGAGCGGCTCGCGGCCGAAGGCCTG
CGGATGACGCCGCAGCATCTTCAGGATCTGGCGACGTCGCGCCGGCGTGCTGTGCTCACGGCCACCGCGATCCGCCTGGAGATGGATCTGACCGATGTTA
CCCTGTCGATGTTCGACAAGCTGATCGGCAGTCTGGCACGGAAGGCCGAGCGCCGGACGGCGGAAAACACCCTGCGTTCCGTCCGCGATACCCAGACCCA
ACTGCGGGTTCTGCTGACCGCGTGCAAGGCAGTGATCGGCGCGCGGGAGGCTGGCGCCGATCCCTACGAGGCCGTCGACCAAGGGGTCGGCTGGTTCCGT
TTCATGAAATGCGTCACCGACAGCGAAGCCCTGGCGAAGCCGGAGATCGCCGACCCGCGCACCGAGATGCTTGGCCGTTACGCCACCGTTCGAGCCTTCG
CCCCCACGCTCCTCAATCGCTTCAGCTTTCTCGGCAGTCCATCGGTGACGCCGTTGCTGCGGGCGCTCGACATCATTCGGGTCATGTACGCCGCCGGGCG
CCGCACTCTGCCCGAGAAGCCACCGACCGGCTTCATCCGACGCTCCTGGCGCCCCTTCGTCATCAAGAAGGAGGGCATCGACCGGAAAGCTTACGAAATC
TGCGCATTGTCCGAACTGCGTGACCGGTTGCGGGCGGGCGACGTCTGGGTGGAGGGGAGCCGCCAGTACCGCGACTTCGAGAGCTGCCTCATGCCGCGTC
CGACCTTCGATATCCTTTGCGAGGAGGGGGCGTTGCCCGTGGCCGTTCCACGCAGCGCCGACGGCCACCTTGCTGAAAGAGGCGCGGAACTCGACCGGAT
TGTTGCCGAAGTAGCGGACCTTGCCGAAGAGGGGTTGCTTGAAGACGTCGACCTGTCCGATGGCGAACTCCGCGTCACGCCGATCCGGGACACGACCCCA
CCGGAGGCCGAAGACCTTGGCCGCCGAGCTTACGATCTCATGCCACGGGTCAAGATCACCGACCTTCTGCAGGAGGTGGATGGCTGGACCGACTTCTCCG
GCTGCTTCACGCACCAACGCAGCGGCCGTCCCGCTGACGACAGGGCGGCAACATTGACCGCTGTGCTGGCCGACGGCATCAACCTCGGGCTGTCCCGGAT
GGCCGAAGCCTGCCGGGGGGCATCCATGCGGCAACTGGCCTGGATGCACGACTGGCACATCCGCGACGATACCTACATGGTGGCGCTTGCCCGCATCATC
GACACGCACCGAGCCTTGCCGTTGGCTGCCGTCTGGGGTGACGGGCGCACGTCATCCTCCGACGGCCAATTCTACCGGGCTGGCGGTCGCGGCGAAGCCG
TCGGCGATGTGAACGCCCATCATGGCAACGAGCCGGGCATCGCCTTCTACACCCACGTCTCCGATCAGTACGGCCCCTTCCACACCAAGGTGATCGCAGC
GACCGCCAGCGAGGCACCCCACGTCATTGATGGCCTTCTCCATCACCAGAGCGGTTTGGACATCGAGGAGCACTACACGGACACCGGAGGCGCAAGCGAT
CACGTTTTCGGCCTGTGTGCCCTGCTCGGATTCCGTTTCGCCCCGCGCATCCGCGATTTGAAGGACCGGAGGCTTTACCTGCTGCCCGGTCGGGAGGCCC
CCGCCATTCTGCGGCCCTTGGTTGGCGGAACCATCGACATCGAGCACCTCACGGCCAATTGGACGGAATTGTTGCGACTGGCGACCTCGATCCGCTCGGG
CACCGCGACGGCCTCGGCCATGCTGCGGCGGCTCTCGGCTTACCCGCGCCAGAATGGCTTGGCCCTGGCTCTGCGAGAACTCGGCCGTATCGAGCGGACC
GCGTTCACCTTACAGTGGCTGCGTGATCCCGCCCTCCGCCGGCGCGCCAACGCCGGCCTCAACAAGGGAGAGGCTCGGAACGCCCTGGCCAGGGCGATCT
TCTTCAATCGCCTGGGTGAGATGCGTGATCGCAGCTTCGAGAACCAGGTCTTCCGGGCATCAGGGCTGAACCTGCTGGTGTCCGCCATCATCCTGTGGAA
CACACGCTATCTCGAAGCCGCTTTCGCCGAACTGGCAAGCCAAGGGCATGGCGTAACCCCCGAATTAATGCGGCATGTGGCGCCTCTGGGATGGGAGCAT
GTCGGCCTCACCGGTGACTATGTCTGGGGAGCCGAACCCCTTCCAGAAGCCGGCCTCAGGCCATTGCGGAGAATGCAGTCCCTGCTCGCCGCATAAGTTC
CATTTCCGTTCCCACTTCCCGGACAATCTGATCACTTTCGTGTAGTGACCCC
CTCTTGAGTTTCGCGACAGGTAGGTACCGGACTGGAACCTTGGAGTTTTTGATGTTGCAAAAGTCTATCGCAAAAGGAAAGAGTTTCGCGATGACTTTTG
CGACGGATGCCCCATGCTCATCGGCTATGCGCGCGTCTCCACCGACGACCAGGATCTTTCGCAGCAGCGGGCGTCGCTACAGGCGGTCGGCTGTCGGCGG
ATTTATGAGGAGAAGGTCTCCGGGGCAAAGCGCGACCGGCCACAGCTTGCCCGGCTGATCGACCAACTCCGGGCCGATGACGTTGTGACGGTCACGCGCC
TCGACAGGCTGGCCCGGTCAACCCGTGATCTTCTCGATATTGCGGAGCAGCTCCAGGGAGCCGGTGCGGGTCTCCGATCACTCGCGGAGCCATGGGCCGA
TACCACCTCGCCGGCCGGGCGGATGGTCCTAACCGTGTTCGCCGGCATCGCCGAGTTCGAGCGCTCCCTGATCGCCGAGCGGACCGGCATGGGCCGCGTG
GCGGCCAGAGCACGCGGCGTGCGGTTCGGCCGGCCGCCGAAGTTGACCGCCGACCAGATCGCTCTCGCTCGGCGCCTGGTCGATGAAGGCCGATCCCCCC
GGGAGGCAGCCCGGATTCTCAACGTCCACGCATCGACGCTGTACCGGGCCTTTGCACTCCAGCCCCCCGAGGTTGCTGGCTCAGGTCCCTAACCGGGCTA
TGTCAGATTTCGTTCCTTTGCTACTCGATCTTCGACCAGCCCCTGCCGAAATGCCGTCATGCTGTCTTCTCACCGCTCATCGCAGCGGCGGCCAGGGCCT
GCGCCTCGGTTGCCGCCTTCAGCCCCGCCTCGCGGCGCTCGCTGTAGCGGTCGGTCAGGTAGTCGCTGCGGTCGCGCACCAGCAGAGTGAACTTCATCAG
TTCCTCCATCACGTCCACCACGCGGTCGTAATAGGGCGACGGCTTCATCCGCCCGGCCTCGTCGAACTCCTGGAAGGCCTTGGCCACCGACGACTGGTTC
GGGATGGTCACCATCCGCATCCAGCGGCCTAGCACCCGCATCGCGTTGACCGCATTGAAGGATTGCGAGCCGCCGGAGACCTGCATCACCGCCAGCGTCC
GCCCCTGCGTCGGCCGGACGCCGCCGCTTTCCAGCGGCAGCCAGTCGATCTGGCATTTCAGGATGCCGGTGATGGTGCCGTGCCGCTCCGGGCTGACCCA
AACCTGGCCTTCCGACCATTGCGACAGGGCGCGCAGCTCCGCCACCTTGGGATGGTCGGCCGGCACGCTGTCCGGCAGCGGCAGGTCGCGCGGGTCGAAG
ATGCGCGTCTCGGCCCCCATGCGCTGGAGCAGCCGGGCGGCTTCCTCGGCCAGGAAGCGGCTGTAGGACCGCTCCCGCAGCGAGCCATAGAGCAGCAGGA
TGCGCGGCGGGTGGGTCGACGGCCGCTCCGGTGTCAGCCTGTCGAGGCCGGGCACATCGAAATAAGGCTCGTCCAGGCTCGGCAAGGAGTCGCGTCCGGT
CGTCTCGATATCATGCATGGGTGCGTCCCTCGTACCAGGGCTTGGTCGCCTTGACGATCTTCACCACAGACAGCATCACCGGCACCTCGACCAGCACGCC
GACCACGGTGGCGAGCGCCGCCCCGGAGCCCAAACCGAACAGGCTTATGGCGGCGGCGACCGCCAGCTCGAAGAAGTTGGAGGCGCCGATCAGCGCCGCC
GGCGCTGCCACGCACCACGCCACGCCGAAGCGGCGCGACAGCCAATAGGCCAGCCCGGCGTTGAAATAGACCTGGATCAGGATCGGCACCGCCAGCAGCA
GGATGACCAGCGGCTGGGCGAGGATCTGCTCGCCCTGGAAGCCGAACAGCAGCACCAGCGTGGTCAGCAGCGCCAGCAGCGAAACCGGCTGGATGAGGTC
GAGCACGCGCTTCAGCGCCGGCTCTCCGCCGGCGACCAGCAGGCTGCGCCGCCAGAGCTGGGCACCGACCACGGGGATGACGATGTAGAGCAGCACCGAC
AGCAGCAGCGTGTCCCACGGCACGGTGATCGACGCCACGCCCAGCAGCAGGCCGACCAGCGGCGCGAAAGCGAAGACCATGATGATGTCGTTCAGCGCCA
CCTGGCTCAGCGTGTAGTGCGGCTCCCCCTCACACAGGTTCGACCAGACGAACACCATGGCGGTGCAGGGCGCCGCCGCCAGCAGGATCAGGCCGGCAAC
GTAGGAGGAAATCTGGTCCTGCGGCAGCAGCGGCGCGAACAGGTTGCCGATGAACAGCGTGCCCAGCAGCGCCATCGAGAAGGGCTTGACCGCCCAGTTG
ATGAACAGCGTCACCCCAACGCCGCGCCAGTGCTCCTTGACCTGCCCCAGCGCGCCGAGGTCGATCTTCAGCAGCATCGGCACGATCATCAGCCAGATCA
GCACCGCCACCGGCAGGTTGACCTTGGCGACCTCGGCCGCGGCGATCGTCTGGAACAGGCCGGGCACCAGATGGCCGAGCGCGATGCCGGCGACGATGCA
CAGCGCTACCCAGACGCTGAGATAGCGCTCGAACGGGCCCATGGCGGGGCGGGCCGCCGGGGCGGCATGAATGTCAGCGGTCATGATGCGTGTCCGTCAG
GAGGCTTTGCCGATGCGGTGTCCGGCGGCGTCGACGACCTGCTCCCCGTCTTCCTTGGCGAAGGCGCCGCGCTGGGCATCGGGGAGGATGTCGAGCACCG
CCTCGGACGGGCGGCACAGCCGCACGCCGAGCGGCGTCACCACGATCGGCCGGTTGATCAGGATCGGATGGGCCATCATGGCGTCGAGCAGTTGGTCGTC
GCTCAACGACGGGTCGGCGAGCCCGGGTTCGGCATAGGGCGTGCCCTTCTCGCGCAGCACGGCGCGCACCGGCACGCCCATGCGGCCGATCAGGTCGGCC
AGCTCGTCACGCGACGGCGGTGTCTTCAGATACTCGATCACCGTCGGCTCGACGCCGCTGTTGCGGATCAGCGCCAGCGTGTTGCGCGAGGTGCCGCAAT
CCGGGTTGTGGTAGATGGTCACCGATGTCATCGCGCCGCCTCCGTGGTGGCGGACGCCTTCCCCATGTCGTCCAGCTTGCGCTTCAGCGCCAGACGGTCG
AGCGAGGCGATGGGCAGGGCGGTGAAAGCCTGGATGCGGCGCTGGATCTGTCCGAACACCGTGGCGGTGAAGGCGGCCTTCTCCGCGTCGCTGCCCTGGG
CAGTCGACGGGTCTGGGAAGCCCCAGTGCGCCGTCATCGGCTGGCCGGGCCACACCGGGCAGACCTCGCCGGCGGCGTTGTCGCAGACGGTGAAGACGAA
GTCCATGTGCGGCGCGTCCGCTGCGGCGAACTCGTCCCAGGTCTTGGAGCGCAGCTCGGCGGTCGGGAAGCCCAGCCGCTCCAGCAGGTCATGGACATAG
GGATTGATGCGGCCGGACGGCTGGCTGCCGGCGCTGAAGCCGCGGAAGCGGCCCTTGCCATCGCGGTTCAGCAGGCACTCCGCCATGACGCTGCGGGCGC
TGTTGTGGGTGCACAGGAACAGGACGTTGTAGACGCGGTCGGTCATCGCTGGATTGCCTTTCCGGGCCGCGGGATGCGGCGGTTGGGATCGGGGCCTCAG
GCGTCGTGGTCACATCCGTCGGGACCACATGGAACGGCCTGGGGGAGGTCGGCGGAGCAGAGTTCGGGGCGGCCCTGGCAGCAGTCCTCCATCAGGAAGG
CGATCAGCCGGCGGGTGCCCTCATAGTCGGACGCGTAGAAGATCTGCCGCTGCACCCGCCAGGAGCGGAGCAGGCCGGCGCGTTCCAGCGTCGCCAGATG
ATGGGACAGGGTGGAGGCCGGAACCCCCACCTGCTGGGCAACCTCGCCTGCCGTCAACCCGTTCGGCCCCACCGTGATCAGCAGGCGGAACACGGCCAGA
CGGGTTTCCTGGGCGAGAGCGGCAAAGGCGTCGACGGCAATCTTGTTTTCCATTATTCGACGATAGTCGAATTATCGATTTGAGGCAATCAGCAGTTTTG
CGCGCCATGCGGTGAGGGGACGCGGGAAAACCGGAAGCAGCGCCTCCGACAGCTCACCCCGTGACAGCCTTGGACCCGCATCACTATTCTCCCCCGAAAA
CGAAGCGATGGGGGATTGGAAGAATGGCGCGTCGGCGGCTGTTGACCGAAGACCAGTGGGCAAGCCTCCTGGCAGTGCCGGACGACGAACGCGCGATGGT
GCGCCACTATACGCTCAGCAGGGACGATCTCGACATCGTCACCCTCCGGCGTACGGCGCACACCCGCCTGGGCTGTGCCATTCTGCTCTGTTATCTCCAT
CATCCTGGGCGGATTCCTGGACCGGACGAGCGCCCGCCCATGGCGCTGCTGGTGTTCGTCGCCCGGCAGGTGGGCGCCGAGCCTGACGATTTCATCGCCT
ACAGTCGACGTGACCAGAACCGGCGCGAGCAGGTTGCCGCGATCATGGCACGGACCGGCCACCGTGCCTTTGATCGAACCCTCTTTCGCGACCTTGCCGC
CTGGCTGACCTCCAAGGCACAGATCGCACGGGACCCGATCATTCTGGCGACCACCTTGATCGATGAGTTCCGTCGCCGTCGCATCCTGATCCCTTCTGCG
GCGATCCTGGAACTGATGCTCCATCAGGCTCGGGGCCGGGCCGAACGGGTTCTGCACCGTGCCCTTGTCGATGGTGTCGACCAGCGGACAACCGACGCGC
TGGACCGATTGCTGACCCTGCAGGCCGACACCGAAACGACCATGCTCGCTTGGTTGCGCCGGGTGCCGGCGGCTCCAACCGCCCGCAACATGCTGGCGGT
CATTGAGCGCCTTTCCACCTTGAAGGAACTCGGCATCGACCGGTCGTTGCGCGCTCGCGTGCCGGAGGTCGCGTTCGAGCGGCTCGCGGCCGAAGGCCTG
CGGATGACGCCGCAGCATCTTCAGGATCTGGCGACGTCGCGCCGGCGTGCTGTGCTCACGGCCACCGCGATCCGCCTGGAGATGGATCTGACCGATGTTA
CCCTGTCGATGTTCGACAAGCTGATCGGCAGTCTGGCACGGAAGGCCGAGCGCCGGACGGCGGAAAACACCCTGCGTTCCGTCCGCGATACCCAGACCCA
ACTGCGGGTTCTGCTGACCGCGTGCAAGGCAGTGATCGGCGCGCGGGAGGCTGGCGCCGATCCCTACGAGGCCGTCGACCAAGGGGTCGGCTGGTTCCGT
TTCATGAAATGCGTCACCGACAGCGAAGCCCTGGCGAAGCCGGAGATCGCCGACCCGCGCACCGAGATGCTTGGCCGTTACGCCACCGTTCGAGCCTTCG
CCCCCACGCTCCTCAATCGCTTCAGCTTTCTCGGCAGTCCATCGGTGACGCCGTTGCTGCGGGCGCTCGACATCATTCGGGTCATGTACGCCGCCGGGCG
CCGCACTCTGCCCGAGAAGCCACCGACCGGCTTCATCCGACGCTCCTGGCGCCCCTTCGTCATCAAGAAGGAGGGCATCGACCGGAAAGCTTACGAAATC
TGCGCATTGTCCGAACTGCGTGACCGGTTGCGGGCGGGCGACGTCTGGGTGGAGGGGAGCCGCCAGTACCGCGACTTCGAGAGCTGCCTCATGCCGCGTC
CGACCTTCGATATCCTTTGCGAGGAGGGGGCGTTGCCCGTGGCCGTTCCACGCAGCGCCGACGGCCACCTTGCTGAAAGAGGCGCGGAACTCGACCGGAT
TGTTGCCGAAGTAGCGGACCTTGCCGAAGAGGGGTTGCTTGAAGACGTCGACCTGTCCGATGGCGAACTCCGCGTCACGCCGATCCGGGACACGACCCCA
CCGGAGGCCGAAGACCTTGGCCGCCGAGCTTACGATCTCATGCCACGGGTCAAGATCACCGACCTTCTGCAGGAGGTGGATGGCTGGACCGACTTCTCCG
GCTGCTTCACGCACCAACGCAGCGGCCGTCCCGCTGACGACAGGGCGGCAACATTGACCGCTGTGCTGGCCGACGGCATCAACCTCGGGCTGTCCCGGAT
GGCCGAAGCCTGCCGGGGGGCATCCATGCGGCAACTGGCCTGGATGCACGACTGGCACATCCGCGACGATACCTACATGGTGGCGCTTGCCCGCATCATC
GACACGCACCGAGCCTTGCCGTTGGCTGCCGTCTGGGGTGACGGGCGCACGTCATCCTCCGACGGCCAATTCTACCGGGCTGGCGGTCGCGGCGAAGCCG
TCGGCGATGTGAACGCCCATCATGGCAACGAGCCGGGCATCGCCTTCTACACCCACGTCTCCGATCAGTACGGCCCCTTCCACACCAAGGTGATCGCAGC
GACCGCCAGCGAGGCACCCCACGTCATTGATGGCCTTCTCCATCACCAGAGCGGTTTGGACATCGAGGAGCACTACACGGACACCGGAGGCGCAAGCGAT
CACGTTTTCGGCCTGTGTGCCCTGCTCGGATTCCGTTTCGCCCCGCGCATCCGCGATTTGAAGGACCGGAGGCTTTACCTGCTGCCCGGTCGGGAGGCCC
CCGCCATTCTGCGGCCCTTGGTTGGCGGAACCATCGACATCGAGCACCTCACGGCCAATTGGACGGAATTGTTGCGACTGGCGACCTCGATCCGCTCGGG
CACCGCGACGGCCTCGGCCATGCTGCGGCGGCTCTCGGCTTACCCGCGCCAGAATGGCTTGGCCCTGGCTCTGCGAGAACTCGGCCGTATCGAGCGGACC
GCGTTCACCTTACAGTGGCTGCGTGATCCCGCCCTCCGCCGGCGCGCCAACGCCGGCCTCAACAAGGGAGAGGCTCGGAACGCCCTGGCCAGGGCGATCT
TCTTCAATCGCCTGGGTGAGATGCGTGATCGCAGCTTCGAGAACCAGGTCTTCCGGGCATCAGGGCTGAACCTGCTGGTGTCCGCCATCATCCTGTGGAA
CACACGCTATCTCGAAGCCGCTTTCGCCGAACTGGCAAGCCAAGGGCATGGCGTAACCCCCGAATTAATGCGGCATGTGGCGCCTCTGGGATGGGAGCAT
GTCGGCCTCACCGGTGACTATGTCTGGGGAGCCGAACCCCTTCCAGAAGCCGGCCTCAGGCCATTGCGGAGAATGCAGTCCCTGCTCGCCGCATAAGTTC
CATTTCCGTTCCCACTTCCCGGACAATCTGATCACTTTCGTGTAGTGACCCC
Protein section
ORF number : 2
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 579 bp | 192 aa | 214 | 792 | + | No |
AG : Tn3 resolvase
ORF sequence :
MLIGYARVSTDDQDLSQQRASLQAVGCRRIYEEKVSGAKRDRPQLARLIDQLRADDVVTVTRLDRLARSTRDLLDIAEQLQGAGAGLRSLAEPWADTTSP
AGRMVLTVFAGIAEFERSLIAERTGMGRVAARARGVRFGRPPKLTADQIALARRLVDEGRSPREAARILNVHASTLYRAFALQPPEVAGSGP
AGRMVLTVFAGIAEFERSLIAERTGMGRVAARARGVRFGRPPKLTADQIALARRLVDEGRSPREAARILNVHASTLYRAFALQPPEVAGSGP
Blast result :ORF 2
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 2973 bp | 990 aa | 4224 | 7196 | + | No |
Chemistry : DDE
ORF sequence :
MARRRLLTEDQWASLLAVPDDERAMVRHYTLSRDDLDIVTLRRTAHTRLGCAILLCYLHHPGRIPGPDERPPMALLVFVARQVGAEPDDFIAYSRRDQNR
REQVAAIMARTGHRAFDRTLFRDLAAWLTSKAQIARDPIILATTLIDEFRRRRILIPSAAILELMLHQARGRAERVLHRALVDGVDQRTTDALDRLLTLQ
ADTETTMLAWLRRVPAAPTARNMLAVIERLSTLKELGIDRSLRARVPEVAFERLAAEGLRMTPQHLQDLATSRRRAVLTATAIRLEMDLTDVTLSMFDKL
IGSLARKAERRTAENTLRSVRDTQTQLRVLLTACKAVIGAREAGADPYEAVDQGVGWFRFMKCVTDSEALAKPEIADPRTEMLGRYATVRAFAPTLLNRF
SFLGSPSVTPLLRALDIIRVMYAAGRRTLPEKPPTGFIRRSWRPFVIKKEGIDRKAYEICALSELRDRLRAGDVWVEGSRQYRDFESCLMPRPTFDILCE
EGALPVAVPRSADGHLAERGAELDRIVAEVADLAEEGLLEDVDLSDGELRVTPIRDTTPPEAEDLGRRAYDLMPRVKITDLLQEVDGWTDFSGCFTHQRS
GRPADDRAATLTAVLADGINLGLSRMAEACRGASMRQLAWMHDWHIRDDTYMVALARIIDTHRALPLAAVWGDGRTSSSDGQFYRAGGRGEAVGDVNAHH
GNEPGIAFYTHVSDQYGPFHTKVIAATASEAPHVIDGLLHHQSGLDIEEHYTDTGGASDHVFGLCALLGFRFAPRIRDLKDRRLYLLPGREAPAILRPLV
GGTIDIEHLTANWTELLRLATSIRSGTATASAMLRRLSAYPRQNGLALALRELGRIERTAFTLQWLRDPALRRRANAGLNKGEARNALARAIFFNRLGEM
RDRSFENQVFRASGLNLLVSAIILWNTRYLEAAFAELASQGHGVTPELMRHVAPLGWEHVGLTGDYVWGAEPLPEAGLRPLRRMQSLLAA
REQVAAIMARTGHRAFDRTLFRDLAAWLTSKAQIARDPIILATTLIDEFRRRRILIPSAAILELMLHQARGRAERVLHRALVDGVDQRTTDALDRLLTLQ
ADTETTMLAWLRRVPAAPTARNMLAVIERLSTLKELGIDRSLRARVPEVAFERLAAEGLRMTPQHLQDLATSRRRAVLTATAIRLEMDLTDVTLSMFDKL
IGSLARKAERRTAENTLRSVRDTQTQLRVLLTACKAVIGAREAGADPYEAVDQGVGWFRFMKCVTDSEALAKPEIADPRTEMLGRYATVRAFAPTLLNRF
SFLGSPSVTPLLRALDIIRVMYAAGRRTLPEKPPTGFIRRSWRPFVIKKEGIDRKAYEICALSELRDRLRAGDVWVEGSRQYRDFESCLMPRPTFDILCE
EGALPVAVPRSADGHLAERGAELDRIVAEVADLAEEGLLEDVDLSDGELRVTPIRDTTPPEAEDLGRRAYDLMPRVKITDLLQEVDGWTDFSGCFTHQRS
GRPADDRAATLTAVLADGINLGLSRMAEACRGASMRQLAWMHDWHIRDDTYMVALARIIDTHRALPLAAVWGDGRTSSSDGQFYRAGGRGEAVGDVNAHH
GNEPGIAFYTHVSDQYGPFHTKVIAATASEAPHVIDGLLHHQSGLDIEEHYTDTGGASDHVFGLCALLGFRFAPRIRDLKDRRLYLLPGREAPAILRPLV
GGTIDIEHLTANWTELLRLATSIRSGTATASAMLRRLSAYPRQNGLALALRELGRIERTAFTLQWLRDPALRRRANAGLNKGEARNALARAIFFNRLGEM
RDRSFENQVFRASGLNLLVSAIILWNTRYLEAAFAELASQGHGVTPELMRHVAPLGWEHVGLTGDYVWGAEPLPEAGLRPLRRMQSLLAA
Blast result :
Comments
ISAzs17 is 59% (ORFA : the resolvase) aa similar to ISSod9 and 61% (ORFB : the transposase ) to ISAcsp1.
Between the resolvase and the transposase, there is an operon arsenic with 5 genes :
arsenical resistance protein : 253(1618-857) CS
arsenite transporter ACR3 family : 357(2684-1611) CS
arsenate reductase : 143(3131-2697) CS
transcriptional regulator : 172(3646-3128) CS
transcriptional regulator : 118(4053-3697) CS
Between the resolvase and the transposase, there is an operon arsenic with 5 genes :
arsenical resistance protein : 253(1618-857) CS
arsenite transporter ACR3 family : 357(2684-1611) CS
arsenate reductase : 143(3131-2697) CS
transcriptional regulator : 172(3646-3128) CS
transcriptional regulator : 118(4053-3697) CS
References
1] ISfinder annotation (2010).
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.