ISAzs13
- Family ISL3
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_013854 | ND | Azospirillum sp. | Azospirillum sp. B510 |
DNA section
IS Length : 1769 bp
Ends
IR Length : 21/23
IRL : GGTCCATCCGCATTCTCGGTGCATCCCCGATGCGGATGGGAGGCGAAATG
IRR : GGCCCATCCGCATTTTCGGTGCAGGGCAGCAGCCTGGGCGTGGGCATTCA
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| GTCAGCGCCGGATGAATACT | AAACTTCATCCGGCCTTTAC | 0 |
DNA sequence
GGTCCATCCGCATTCTCGGTGCATCCCCGATGCGGATGGGAGGCGAAATGAGCACATAAAGAGAATGATTTTCCTTTCAGAGTGCCAGCACCCTTGTCCA
AATTCCTGCTTTCGTTGCTCCCGGCCGGCCTTGCCGTCGATCAGGTTTCCACCGAGGCGGATCGTGTCGCCGTAACCGCTCACGTGCGGACTGCAAAGGC
GAGCTGTCCGCTGTGCCGTCGCCCCTCCGTGCGCGTCCACAGCCGGTACTTCCGACATCTGGGCGACCTGCCCTGGCAGGGCCGGATCGGCGAACTCCGT
CTGCAGGTCCGTCGCTTCCGCTGTGCGACGGCGGACTGTTCCCGCCGTATCTTCGCCGAACGCCTGCCCACCGTGGCGGCGCCTCGGGTCAGGCGCACCC
GGCGGCTTGCCGAGGCGCAGCGCACCATTGCGTTGAGCGCGGGCGGGGATCCCGGCGCCCGGCTGTCCACCCGGCTCGCCATGCCGGTCAGCGGCGACAC
GCTGCTGCGTTTGATCCGGGCGGAGCCGGTGCCGCCGGTCTGCGAAGCCCGCATCATCGGAATCGATGATTGGGCTTGGCGCCGGGGCAAGCGCTACGGC
ACCATCGTCGTCGATCTCGAGCGAAATCATCCCATCGACCTTCTGCCAGACCGCCAAGCCGACACCGTTGCCACATGGCTGAAAGCCCGTCCTGGCGTCG
AGATCGTCGCCCGTGACCGTGCCGGTGCTTACGCCGATGGCGTCCGCCAGGGTGCTCCCGCCGCCGTCCAGGTCGCCGACCGCTGGCATCTTCTGCACAA
TCTCACCGATGCGCTGCGCGAGGTCCTCACCGGCCATCACCGCGACCTTCGGGCCGCCGCCAGGCTGGCTGTCTCTCCCGTGGGAGAAGCCGGGCCAGTA
GGAGAAACCGTGCAGGAGCCGCGGTCGCCGCGGTCGGATGAGGAGTCCAGTCCACCAACCCGGCGGGAGCTGCGGAGCGCTGCCATTCATGCCGCTCGCC
ATGCCCGCTACGAAGAAGTCGTCGCGCTGAAAGCCCGCGGGTGGTCGCAAACGCGCATCGCTGAAACGCTCCACCTCGACCGCAAGACGGTGCGGGTGTG
GCTGCGATCCGGGCAGCCGCCGGCATGGCGCCAGCCGGCCAAGGGGAGCCGGCTTGATCCGTTCCTCGATCACCTGCAGCAACGCTGGGATGACGGCTGC
CACAACGCCGCTCAGCTCTGGCGGGAGATCAGGTCCCGCGGCTTCACCGGTCAGCGCAGCATAGTCCGGGACTGGGCAAGGCTTCTGCGACAGGCCGTAC
GAAGCGCCGCGTCCATGGCATCGACATCATGGCCGGTGCCGTCGCGCCGCCGGGCAGCATGGTTGGTAATCGCCGACGAGCAGGAGATCGATCCGACCGA
ACAGGCCTTCGTCTCGGCCCTGATCGCCCGATCACCAGAACTAGGACGAACCATCACCGTGACCCGTGCCTTTCGGGCGATGGTCCGAGGACAACGAGCC
GGAGAACTGGACAACTGGCTGCTGACGGCGGAGGGCACCCCCTTGGCGGGCTTTGCCAATGGCTTGAAGCGCGATCTTGCTGCGGTCCGGGCGGCTCTGT
CCCTGCCGTGGAGCACTGGGCCAGTGGAGGGGCAGATCAGCCGGCTGAAGACGATCAAGCGCATGATGAACGGCCGCGGCGGTTTCGACTTGCTGCGCCA
TCGCATGCTCGAGGCCGCCTGAATGCCCACGCCCAGGCTGCTGCCCTGCACCGAAAATGCGGATGGGCC
AATTCCTGCTTTCGTTGCTCCCGGCCGGCCTTGCCGTCGATCAGGTTTCCACCGAGGCGGATCGTGTCGCCGTAACCGCTCACGTGCGGACTGCAAAGGC
GAGCTGTCCGCTGTGCCGTCGCCCCTCCGTGCGCGTCCACAGCCGGTACTTCCGACATCTGGGCGACCTGCCCTGGCAGGGCCGGATCGGCGAACTCCGT
CTGCAGGTCCGTCGCTTCCGCTGTGCGACGGCGGACTGTTCCCGCCGTATCTTCGCCGAACGCCTGCCCACCGTGGCGGCGCCTCGGGTCAGGCGCACCC
GGCGGCTTGCCGAGGCGCAGCGCACCATTGCGTTGAGCGCGGGCGGGGATCCCGGCGCCCGGCTGTCCACCCGGCTCGCCATGCCGGTCAGCGGCGACAC
GCTGCTGCGTTTGATCCGGGCGGAGCCGGTGCCGCCGGTCTGCGAAGCCCGCATCATCGGAATCGATGATTGGGCTTGGCGCCGGGGCAAGCGCTACGGC
ACCATCGTCGTCGATCTCGAGCGAAATCATCCCATCGACCTTCTGCCAGACCGCCAAGCCGACACCGTTGCCACATGGCTGAAAGCCCGTCCTGGCGTCG
AGATCGTCGCCCGTGACCGTGCCGGTGCTTACGCCGATGGCGTCCGCCAGGGTGCTCCCGCCGCCGTCCAGGTCGCCGACCGCTGGCATCTTCTGCACAA
TCTCACCGATGCGCTGCGCGAGGTCCTCACCGGCCATCACCGCGACCTTCGGGCCGCCGCCAGGCTGGCTGTCTCTCCCGTGGGAGAAGCCGGGCCAGTA
GGAGAAACCGTGCAGGAGCCGCGGTCGCCGCGGTCGGATGAGGAGTCCAGTCCACCAACCCGGCGGGAGCTGCGGAGCGCTGCCATTCATGCCGCTCGCC
ATGCCCGCTACGAAGAAGTCGTCGCGCTGAAAGCCCGCGGGTGGTCGCAAACGCGCATCGCTGAAACGCTCCACCTCGACCGCAAGACGGTGCGGGTGTG
GCTGCGATCCGGGCAGCCGCCGGCATGGCGCCAGCCGGCCAAGGGGAGCCGGCTTGATCCGTTCCTCGATCACCTGCAGCAACGCTGGGATGACGGCTGC
CACAACGCCGCTCAGCTCTGGCGGGAGATCAGGTCCCGCGGCTTCACCGGTCAGCGCAGCATAGTCCGGGACTGGGCAAGGCTTCTGCGACAGGCCGTAC
GAAGCGCCGCGTCCATGGCATCGACATCATGGCCGGTGCCGTCGCGCCGCCGGGCAGCATGGTTGGTAATCGCCGACGAGCAGGAGATCGATCCGACCGA
ACAGGCCTTCGTCTCGGCCCTGATCGCCCGATCACCAGAACTAGGACGAACCATCACCGTGACCCGTGCCTTTCGGGCGATGGTCCGAGGACAACGAGCC
GGAGAACTGGACAACTGGCTGCTGACGGCGGAGGGCACCCCCTTGGCGGGCTTTGCCAATGGCTTGAAGCGCGATCTTGCTGCGGTCCGGGCGGCTCTGT
CCCTGCCGTGGAGCACTGGGCCAGTGGAGGGGCAGATCAGCCGGCTGAAGACGATCAAGCGCATGATGAACGGCCGCGGCGGTTTCGACTTGCTGCGCCA
TCGCATGCTCGAGGCCGCCTGAATGCCCACGCCCAGGCTGCTGCCCTGCACCGAAAATGCGGATGGGCC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1641 bp | 546 aa | 82 | 1722 | + | No |
Chemistry : Unknow
ORF sequence :
MPAPLSKFLLSLLPAGLAVDQVSTEADRVAVTAHVRTAKASCPLCRRPSVRVHSRYFRHLGDLPWQGRIGELRLQVRRFRCATADCSRRIFAERLPTVAA
PRVRRTRRLAEAQRTIALSAGGDPGARLSTRLAMPVSGDTLLRLIRAEPVPPVCEARIIGIDDWAWRRGKRYGTIVVDLERNHPIDLLPDRQADTVATWL
KARPGVEIVARDRAGAYADGVRQGAPAAVQVADRWHLLHNLTDALREVLTGHHRDLRAAARLAVSPVGEAGPVGETVQEPRSPRSDEESSPPTRRELRSA
AIHAARHARYEEVVALKARGWSQTRIAETLHLDRKTVRVWLRSGQPPAWRQPAKGSRLDPFLDHLQQRWDDGCHNAAQLWREIRSRGFTGQRSIVRDWAR
LLRQAVRSAASMASTSWPVPSRRRAAWLVIADEQEIDPTEQAFVSALIARSPELGRTITVTRAFRAMVRGQRAGELDNWLLTAEGTPLAGFANGLKRDLA
AVRAALSLPWSTGPVEGQISRLKTIKRMMNGRGGFDLLRHRMLEAA
PRVRRTRRLAEAQRTIALSAGGDPGARLSTRLAMPVSGDTLLRLIRAEPVPPVCEARIIGIDDWAWRRGKRYGTIVVDLERNHPIDLLPDRQADTVATWL
KARPGVEIVARDRAGAYADGVRQGAPAAVQVADRWHLLHNLTDALREVLTGHHRDLRAAARLAVSPVGEAGPVGETVQEPRSPRSDEESSPPTRRELRSA
AIHAARHARYEEVVALKARGWSQTRIAETLHLDRKTVRVWLRSGQPPAWRQPAKGSRLDPFLDHLQQRWDDGCHNAAQLWREIRSRGFTGQRSIVRDWAR
LLRQAVRSAASMASTSWPVPSRRRAAWLVIADEQEIDPTEQAFVSALIARSPELGRTITVTRAFRAMVRGQRAGELDNWLLTAEGTPLAGFANGLKRDLA
AVRAALSLPWSTGPVEGQISRLKTIKRMMNGRGGFDLLRHRMLEAA
Blast result :
Comments
ISAzs13 is 91% aa similar to ISAli11.
References
1] ISfinder annotation (2010).
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.