ISAzs6
- Family IS701
- Group
Isoform Synonym(s) ISazl19_01
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_013854 | ND | Azospirillum sp. | Azospirillum sp. B510 plasmid pAB510b Azospirillum sp. B510 plasmid pAB510a Azospirillum sp. B510 Azospirillum sp. B510 plasmid pAB510d Azospirillum sp. B510 plasmid pAB510c |
DNA section
IS Length : 1385 bp
Ends
IR Length : 14
IRL : TACTACAGCCGGTCGCGAAAGACGGAATATGCGGCCGGGCGGCCTGTTGA
IRR : TACTACAGCCGGTCCTTATCGGTTTGGGTGCGTCGTTTCCAATGGGAGCG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TCAACAGGCC | CTAG | GCGGCAACCC | 4 |
| CGCTCGAGCC | CTAG | GGCCTGTTGA | 4 |
| TCCGGTCTAG | ATAGCCGGCG | 0 | |
| TCAACAGGCC | CTAG | GGCCTGTTGA | 4 |
| TATGAATTAG | CTAGGGCCTG | 0 | |
| GCTTGCCGTC | CTAG | GGCCTGTTGA | 4 |
| TTCACCGTGG | CTAG | GGCCTGTTGA | 4 |
| GGGTGGCGGG | TTAG | GGCCTGTTGA | 4 |
DNA sequence
TACTACAGCCGGTCGCGAAAGACGGAATATGCGGCCGGGCGGCCTGTTGAGCTTGGAACCGACTGGAGGGTCCGAGCATGACCGAGATGACGGAAGCGGC
GGAATGGTCCGATGCCCTGGAAGGGCTGGTCGGCGGATTGAGGTCCTTCTACAGCGCGGCCGGTCGCCAACGGGCTCTGCGTTACGTGAGAGGTCTTTTG
GCGCCGCTGGATCGCAAGAATGGCTGGCAGTTGGCCGAAGCCGCCGGGGATTGCTCGCCGGCGGCGATGCAGGATTTCCTGGCCCGGACCCGTTGGGATG
CCGACGCCGTCCGCGACGACCTCCAGGCCTATGTCATCGAACGGTTGAGCGACGATGAGGCCGTGCTGGTCCTCGATGAAACCGGCTTCGTCAAGAAGGG
CACCCGCTCGGTCGGGGTGAAGCGGCAGTATTCCGGCACCGCCGGACGTATCGAAAACTGCCAGATCGGCGTCTTCCTCGGCTACGCCAGCCGACGCGGC
CGGGTGCTGGTCGACCGCGCTCTCTATCTGCCCGAGGACTGGGCTGGCAACGACGAACGCCGACGGATGGCCGGCGTCCCCAACGCCGTCGGCTTCGCCA
CCAAGCCGAAACTGGGGCGGGCGATGCTGGAGCGCGCCGTGGCAGCCGGCCTGCCCTGCCGCTGGGTGACCGCCGACTCCGTCTACGGCGGGGACTACGC
GCTGCGGCTATGGCTGGAGCGCCAACCGCTGGGCTACGTGCTGGCGATCACCAGCAAACAGCGCGCGCCCATGGGCTTCGATACGGTCAAGGAGCGGACG
ACCGGCTTCACCGCCACCGACTGGCAGCGGTTGAGTGCTGGCGACGGAGCCAAGGGGCCACGCCTCTACGACTGGGCGCACAAAACCTACGCTTCCCTGC
GCGAGGGCTGGTGCCGCGGTCTGCTGGTGCGCCGCTCCATCGCCGAGCCGGACAAACTCACCTACTATCTGACCTTCGCCCCGGAAGGCACGCCGGTCGC
CACATTGGTCCGGGTCGCCGGGTCGCGCTGGACCATCGAGTCCTGCTTCGAGGCGGCGAAGGGCGAGGTCGGGCTCGACCAGTACGAGGTGCGCTCGTGG
ACCGGCTGGCACCGCCACGTCACCTTGGCCATGCTGGCCCTGGCCTTTCTCACCGTCGTGCGCACGGCGGCCATCGGGGGGAGAGGATCAACTCGACCTG
TCCGCCGATCTTCTGCCCTTGACCGTGCCCGAGATCCGCGCCCTCCTGGTCGCCTTGATCGGCCGGCCCCCCGCGCCACCCACCGCCATTATCGATTGGT
CCATCTGGCGAAGACGCCACCAACAGCGAGCACGGCGCTCCCATTGGAAACGACGCACCCAAACCGATAAGGACCGGCTGTAGTA
GGAATGGTCCGATGCCCTGGAAGGGCTGGTCGGCGGATTGAGGTCCTTCTACAGCGCGGCCGGTCGCCAACGGGCTCTGCGTTACGTGAGAGGTCTTTTG
GCGCCGCTGGATCGCAAGAATGGCTGGCAGTTGGCCGAAGCCGCCGGGGATTGCTCGCCGGCGGCGATGCAGGATTTCCTGGCCCGGACCCGTTGGGATG
CCGACGCCGTCCGCGACGACCTCCAGGCCTATGTCATCGAACGGTTGAGCGACGATGAGGCCGTGCTGGTCCTCGATGAAACCGGCTTCGTCAAGAAGGG
CACCCGCTCGGTCGGGGTGAAGCGGCAGTATTCCGGCACCGCCGGACGTATCGAAAACTGCCAGATCGGCGTCTTCCTCGGCTACGCCAGCCGACGCGGC
CGGGTGCTGGTCGACCGCGCTCTCTATCTGCCCGAGGACTGGGCTGGCAACGACGAACGCCGACGGATGGCCGGCGTCCCCAACGCCGTCGGCTTCGCCA
CCAAGCCGAAACTGGGGCGGGCGATGCTGGAGCGCGCCGTGGCAGCCGGCCTGCCCTGCCGCTGGGTGACCGCCGACTCCGTCTACGGCGGGGACTACGC
GCTGCGGCTATGGCTGGAGCGCCAACCGCTGGGCTACGTGCTGGCGATCACCAGCAAACAGCGCGCGCCCATGGGCTTCGATACGGTCAAGGAGCGGACG
ACCGGCTTCACCGCCACCGACTGGCAGCGGTTGAGTGCTGGCGACGGAGCCAAGGGGCCACGCCTCTACGACTGGGCGCACAAAACCTACGCTTCCCTGC
GCGAGGGCTGGTGCCGCGGTCTGCTGGTGCGCCGCTCCATCGCCGAGCCGGACAAACTCACCTACTATCTGACCTTCGCCCCGGAAGGCACGCCGGTCGC
CACATTGGTCCGGGTCGCCGGGTCGCGCTGGACCATCGAGTCCTGCTTCGAGGCGGCGAAGGGCGAGGTCGGGCTCGACCAGTACGAGGTGCGCTCGTGG
ACCGGCTGGCACCGCCACGTCACCTTGGCCATGCTGGCCCTGGCCTTTCTCACCGTCGTGCGCACGGCGGCCATCGGGGGGAGAGGATCAACTCGACCTG
TCCGCCGATCTTCTGCCCTTGACCGTGCCCGAGATCCGCGCCCTCCTGGTCGCCTTGATCGGCCGGCCCCCCGCGCCACCCACCGCCATTATCGATTGGT
CCATCTGGCGAAGACGCCACCAACAGCGAGCACGGCGCTCCCATTGGAAACGACGCACCCAAACCGATAAGGACCGGCTGTAGTA
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1293 bp | 430 aa | 78 | 1370 | + | No |
Chemistry : DDE
ORF sequence :
MTEMTEAAEWSDALEGLVGGLRSFYSAAGRQRALRYVRGLLAPLDRKNGWQLAEAAGDCSPAAMQDFLARTRWDADAVRDDLQAYVIERLSDDEAVLVLD
ETGFVKKGTRSVGVKRQYSGTAGRIENCQIGVFLGYASRRGRVLVDRALYLPEDWAGNDERRRMAGVPNAVGFATKPKLGRAMLERAVAAGLPCRWVTAD
SVYGGDYALRLWLERQPLGYVLAITSKQRAPMGFDTVKERTTGFTATDWQRLSAGDGAKGPRLYDWAHKTYASLREGWCRGLLVRRSIAEPDKLTYYLTF
APEGTPVATLVRVAGSRWTIESCFEAAKGEVGLDQYEVRSWTGWHRHVTLAMLALAFLTVVRTAAIGGRGSTRPVRRSSALDRARDPRPPGRLDRPAPRA
THRHYRLVHLAKTPPTASTALPLETTHPNR
ETGFVKKGTRSVGVKRQYSGTAGRIENCQIGVFLGYASRRGRVLVDRALYLPEDWAGNDERRRMAGVPNAVGFATKPKLGRAMLERAVAAGLPCRWVTAD
SVYGGDYALRLWLERQPLGYVLAITSKQRAPMGFDTVKERTTGFTATDWQRLSAGDGAKGPRLYDWAHKTYASLREGWCRGLLVRRSIAEPDKLTYYLTF
APEGTPVATLVRVAGSRWTIESCFEAAKGEVGLDQYEVRSWTGWHRHVTLAMLALAFLTVVRTAAIGGRGSTRPVRRSSALDRARDPRPPGRLDRPAPRA
THRHYRLVHLAKTPPTASTALPLETTHPNR
Blast result :
Comments
ISAzs6 is 68% aa similar to ISMdi28.
References
1] ISfinder annotation (2010)
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.