ISVa3

  • Family IS91
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
AY255699 ND Vibrio anguillarum
Listonella anguillarum 775 plasmid pJM1
Listonella anguillarum plasmid pEIB1
Vibrio anguillarum
Listonella anguilarum
Listonella anguillarum 775
DNA section
IS Length : 1508 bp

Ends


oriIS : TTAGCGATGCTACGCATCGAGCTAGGGCGCTGTTAATTCATTAATATTCTTATTATTCATAGTGCGTTATCCTATCCTTACATTACCTTCCTCTAGATTT II struct. : No
terIS : AACGACCTAATTATCTCACTTTCAGCAAACGCTCACGACTCAAACAGGAGATTTACTTCGCCTGCCAAACTTGATGGTTAGGATTGAAATTCCTAACCAT II struct. : No

Insertion site


Left flankLE cleavage siteRight flankRE cleavage site
TTCTTCATAT CAAGGAAC TTAGCTCCAC
GAAACGCAAC CAAGGAAC GCAGTGAGGC
GCATCTGCAT CAAGCAAG CGAAGCGCTG

DNA sequence

TTAGCGATGCTACGCATCGAGCTAGGGCGCTGTTAATTCATTAATATTCTTATTATTCATAGTGCGTTATCCTATCCTTACATTACCTTCCTCTAGATTT
TTACGTGGTTCAATACTCAGGTCGTAGACGTCGCCACCACACACTAAAAGAATTTGTTCCCCGCGCAACGAAACTCCTATTTGAAAAAGACAACGCTTGG
GAAAAAGTGCTTTGGAAACACGCTCAGACCTTCAGCCTTTGGCAAATCACTTGCGTGGAACGCATGCTCGCGTGCGGCACCAATATGATGGGCGCCAAAC
ACTACGATTGCGGAACATCTAATTGCCCGCACACTAAGGTCGTCTGTCAAAGCTGCAAGACGAAGGCTTGCAGCTCTTGTGGTACGAAATCCACCGAGCA
ATGGATACACACTCAGCTCGATGTCATGCCTGATTGTGAGCACCAGCACATCACCTTCACTATGCCGAGCGAGCTATGGCCCATCTTCGAAGCCAATCCT
ACATTACTCAATGATTTGTTCTCTCTTGCAGCCGACACGCTGTTAGAGTGGGCAAAAAAGCATGGACTTGAAGTGGGGATATTCGGTGCCCTTCATACTT
ATGGCCGAGCCCTCAACTGGCATCCACACATCCATTTATCGGTTACCCGTGGAGGGTTAGATAAACACAATACTTGGAAGCCTATCTATTTTAAAAAGAA
ACATGTCGAGTATCACTGGCGGCGCACTCTCATCAGGCTTCTCAGACAAAAATACGACGACCTCAACTTATCCACATCGACCACCCATCACATTCAATAT
TACCGTCAATGGAACTTCTTCTTAGAGCGTCACTATCAGCGCTACTGGAATATTCACTTTGCAAAAAAAACGAAAGTGCTAAAGCAAACGGTGAATTATC
TGGGTCGTTACCTGAAGCGCCCACCGATATCCGCATCGAGGCTGCGTCATTATAGCGGGGGAACGGTAGTCTTTAAGTATCTAGACCATCGAGACGGAAC
CCATAAAACGAAGACGTTGACGCAGGAAGAGATGATATTACGGTACGTGAGTCATATCCCGCAGCACCATTTTAAAATGGTGCGTTACTATGGTTTTCTG
TCCAACAGAAAACGAGGGCGCCTACTTCCTTTGGTGTATTTAGCGTTAGAAAAGAAGAGTCTGGAACAGGCTGAGCCGCTCACGTATGCCAAACAATACA
AAGGTTTTACAGGCAATGACCCGTACCAGTGTGTGCTATGCGGAGGCAGAATGGAATTTACAGGTTTTATGAAAGGTCCGAAAAATGATGAACTATTGGA
TAGTCGTCGAATGAGCATGCGCGAAGCGCGGCGATTAAGCGTAGCTGCGTAGGATAAGTCCGTCTAAATTTAGTAAATGAGTGGAAAAAATACCCAAACT
GCTGGTAAAACGACCTAATTATCTCACTTTCAGCAAACGCTCACGACTCAAACAGGAGATTTACTTCGCCTGCCAAACTTGATGGTTAGGATTGAAATTC
CTAACCAT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1248 bp415 aa1051352+No
ORF function : Transposase
Chemistry : Y2

ORF sequence :

VVQYSGRRRRHHTLKEFVPRATKLLFEKDNAWEKVLWKHAQTFSLWQITCVERMLACGTNMMGAKHYDCGTSNCPHTKVVCQSCKTKACSSCGTKSTEQW
IHTQLDVMPDCEHQHITFTMPSELWPIFEANPTLLNDLFSLAADTLLEWAKKHGLEVGIFGALHTYGRALNWHPHIHLSVTRGGLDKHNTWKPIYFKKKH
VEYHWRRTLIRLLRQKYDDLNLSTSTTHHIQYYRQWNFFLERHYQRYWNIHFAKKTKVLKQTVNYLGRYLKRPPISASRLRHYSGGTVVFKYLDHRDGTH
KTKTLTQEEMILRYVSHIPQHHFKMVRYYGFLSNRKRGRLLPLVYLALEKKSLEQAEPLTYAKQYKGFTGNDPYQCVLCGGRMEFTGFMKGPKNDELLDS
RRMSMREARRLSVAA

 

Blast result :
Comments
ISVa3 is 64% aa similar to ISVsa9.
References
1] K. Olav Holm (2010) Direct submission