ISfinder Mirror Site

ISMae37

Family ISL3
Group

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
NC_010296	ND	Microcystis aeruginosa	Microcystis aeruginosa NIES-843

DNA section

IS Length : 1245 bp

Ends

IR Length : 19/22

IRL : GGCTCTTCTAGGTTCTGTGTGAGCATGGTATAATAGTAACACAGAACAGG
IRR : GGCTCTTCTGGTTTTCGTGTGTTAATTTTTGTTATGAATTAAAGCAAGCA

Insertion site

Left flank	Direct repeat	Right flank	DR Length
TTCGGCAGAA	AAGGGTC	TATATTCTTC	7
CTACTGACTC	CTAACCC	TAAGAACAAT	7
CGCTATCGTC	GATTTAG	ACTTACAAAA	7

DNA sequence

GGCTCTTCTAGGTTCTGTGTGAGCATGGTATAATAGTAACACAGAACAGGAGGTGGGTTATGTGGATAAATTTTGATCAACTCCTCGATTTACCAAATGT
AACAGTGGTCAATTATCAAAAAATTGATGAGACAATTTTCCTAAAGCTCGCTCTTTTAAATGAAACAATTGAATGTCCGAATTGCCATCAAACCTTGGAC
AGAATCAATCAGACAGAGTATAATCTAGTCAGAGATTTGTCAATATTAGGCAATCGAGTATATTTGGAAGTACCACGCCGCCAGTTTCATTGTCAAAAGT
GCCAAAAGTATATCAGCGAAAGACTAAGTTTTATGAGATTAAGACAGCATCATACAATTCGCTATGAATCGATGATTTATGAGAGAGTAAAAAATTGTAG
TATCGAAGAAATAAGTCGAGAAGAAGGGTTAGGATGGTCAGAAGTTGAGTTAATATTTAATCACTGTGCTAAAGAACTAGAAAAGGAAGAGTGGGAAGCA
CCAGAACGAATAAGCTTAGATGAATTTAGTAACTTAAAAGGACACAAAGATTTCATAACAACGGTCGTAGATCTGGACAAGAAAATTTTACTAGATGTGA
TTAAAGGACATAAGCAAGAAGAATTAATGGAAGCCTTAAAAGCACAGCCAGAGGCAGTTCGGGAGAAGGTGAAAGAAGTGAGCGTCGATATGTGGTCAGG
ATTTACAGCAGTGATCAAGGAATTATTTCCTAATGCTAAAATCATCTATGATCGTTTTCATGTAATGGCTATCATCAATGACGAGCTTAATAAATTGAGA
AAATTAATGGGGGTGCATGAAAAAGGATTACCTCATTTATTATGGAAGAATAAAGAGGACTTAAAAGACGAGCAAAAACAACAACTAGAAGTTATCCTGA
AAGAACATCCCTGCTTGGGAATAGCCTGGGAAATGAAAGAAGAAATTAGACAAATTTATCAAAGTAGTAGAACGTTCAGAGGTGCTGAGAGAAAATTGGA
AAAATGGATAAGAATAGGCGGAATATTATATGAAAGTGGTGCCAGCATGATCCAGAAGCATTTGCAGGGTATTTGTAATTACTTTGAAAATCATACAACC
AACGGATTAATTGAGGGAATGAATACCAAAATAAAGCTTATTAAAAGAATGAGTTATGGATTTACCAATTTTCAACATCTTCGACTTAAGCTGTTTGCTT
GCTTTAATTCATAACAAAAATTAACACACGAAAACCAGAAGAGCC

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
1155 bp	384 aa	60	1214	+	No

ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MWINFDQLLDLPNVTVVNYQKIDETIFLKLALLNETIECPNCHQTLDRINQTEYNLVRDLSILGNRVYLEVPRRQFHCQKCQKYISERLSFMRLRQHHTI
RYESMIYERVKNCSIEEISREEGLGWSEVELIFNHCAKELEKEEWEAPERISLDEFSNLKGHKDFITTVVDLDKKILLDVIKGHKQEELMEALKAQPEAV
REKVKEVSVDMWSGFTAVIKELFPNAKIIYDRFHVMAIINDELNKLRKLMGVHEKGLPHLLWKNKEDLKDEQKQQLEVILKEHPCLGIAWEMKEEIRQIY
QSSRTFRGAERKLEKWIRIGGILYESGASMIQKHLQGICNYFENHTTNGLIEGMNTKIKLIKRMSYGFTNFQHLRLKLFACFNS

Blast result :

Comments

ISMae37 is 54% aa similar to ISAsp1.

References

1] Modified and submitted by ISfinder (2010)

2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.