ISEcl3
- Family IS5
- Group IS903
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AY780889 | ND | Enterobacter cloacae | Enterobacter cloacae plasmid pT103 |
DNA section
IS Length : 1055 bp
Ends
IR Length : 17
IRL : GGCTTTGTTGAATAAATTGAACTTTTAGGCGCCTGGCGGATCTGATCGCT
IRR : GGCTTTGTTGAATAAATCAGAGTTAACCTACTGGATGACTCTCGCAGGTA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GGTTCTAATT | CTGTTGGGCA | 0 |
DNA sequence
GGCTTTGTTGAATAAATTGAACTTTTAGGCGCCTGGCGGATCTGATCGCTACGGTCGTTTCAACATCGGATCCCCATGGCAAAGCAAAAGTTTAAAATCA
CCAACTGGTCCACCTACAACAGTGCGCTCAGACAGCGCGGCTCGCTGACGGTCTGGCTTGATGAGTCAGCTATTGCTGCATGGACTGACAGTGCACAGCC
TGAAGGTCGTGGCCGACCGCTCCACTACACAGATATGGCGATCTCCACGGTTCTGATGATGAAGCGCGTGTTTAACCTGCCGCTCCGGGCTTTACAGGGC
TTCGTTGACTCAGTTTTTACTCTGATGGCTCTGCCGCTGCGCTGCCCGGACTACTCTCTGGTGAGCAAACGGGCAAAATGCGTCAACATCAGCATAAAGA
CGCCAACCCGGGGTGAAATCTCGCATCTGGTCATTGATGCTACCGGTCTGAAGGTCTTCGGCGAAGGTGAATGGAAAGTCAGACAGCATGGGGCTGACAA
ACGCAGGGTGTGGCGCAAGCTCCATCTGGCCGCAGACAGTGCGACGCACGAGATTATCTGTGCCGATTTATCGCTTAGCGGTACAACAGATGCGCAGGCT
CTGCCAGAGCTGATAAACCAGACCCACCGGAAAATCAGGGAAGCATCGGCAGACGGCGCTTATGACACACGCTACTGCCATGATGCGTTGCTTCGGAAAA
AAATCAGGCCACTTATCCCGCCGCGAAGCGGGGCGCAATACTGGCCGGACAAGTACCATGAACGTAACCACGCGGTGGCGAATCAGCATCTGAGCGGCGG
CAATGACGTCTGGAAAAAGAAGGTGAGCTATCACCGTCGTTCGATAGCAGAAACAGCTATGTTCCGCATCAAAAGCTTGCTGGGTGGTCATCTGAGCCTG
CGGGGCTATGACGCGCAGGTGGGTGAAGCGATGGCAATGGTCAAGGCGCTGAACCGGATGACGTTGTTGGGTATGCCGCACAGCGTCCGGATCGCATAAC
GGGTGTACCTGCGAGAGTCATCCAGTAGGTTAACTCTGATTTATTCAACAAAGCC
CCAACTGGTCCACCTACAACAGTGCGCTCAGACAGCGCGGCTCGCTGACGGTCTGGCTTGATGAGTCAGCTATTGCTGCATGGACTGACAGTGCACAGCC
TGAAGGTCGTGGCCGACCGCTCCACTACACAGATATGGCGATCTCCACGGTTCTGATGATGAAGCGCGTGTTTAACCTGCCGCTCCGGGCTTTACAGGGC
TTCGTTGACTCAGTTTTTACTCTGATGGCTCTGCCGCTGCGCTGCCCGGACTACTCTCTGGTGAGCAAACGGGCAAAATGCGTCAACATCAGCATAAAGA
CGCCAACCCGGGGTGAAATCTCGCATCTGGTCATTGATGCTACCGGTCTGAAGGTCTTCGGCGAAGGTGAATGGAAAGTCAGACAGCATGGGGCTGACAA
ACGCAGGGTGTGGCGCAAGCTCCATCTGGCCGCAGACAGTGCGACGCACGAGATTATCTGTGCCGATTTATCGCTTAGCGGTACAACAGATGCGCAGGCT
CTGCCAGAGCTGATAAACCAGACCCACCGGAAAATCAGGGAAGCATCGGCAGACGGCGCTTATGACACACGCTACTGCCATGATGCGTTGCTTCGGAAAA
AAATCAGGCCACTTATCCCGCCGCGAAGCGGGGCGCAATACTGGCCGGACAAGTACCATGAACGTAACCACGCGGTGGCGAATCAGCATCTGAGCGGCGG
CAATGACGTCTGGAAAAAGAAGGTGAGCTATCACCGTCGTTCGATAGCAGAAACAGCTATGTTCCGCATCAAAAGCTTGCTGGGTGGTCATCTGAGCCTG
CGGGGCTATGACGCGCAGGTGGGTGAAGCGATGGCAATGGTCAAGGCGCTGAACCGGATGACGTTGTTGGGTATGCCGCACAGCGTCCGGATCGCATAAC
GGGTGTACCTGCGAGAGTCATCCAGTAGGTTAACTCTGATTTATTCAACAAAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
924 bp | 307 aa | 76 | 999 | + | No |
Chemistry : DDE
ORF sequence :
MAKQKFKITNWSTYNSALRQRGSLTVWLDESAIAAWTDSAQPEGRGRPLHYTDMAISTVLMMKRVFNLPLRALQGFVDSVFTLMALPLRCPDYSLVSKRA
KCVNISIKTPTRGEISHLVIDATGLKVFGEGEWKVRQHGADKRRVWRKLHLAADSATHEIICADLSLSGTTDAQALPELINQTHRKIREASADGAYDTRY
CHDALLRKKIRPLIPPRSGAQYWPDKYHERNHAVANQHLSGGNDVWKKKVSYHRRSIAETAMFRIKSLLGGHLSLRGYDAQVGEAMAMVKALNRMTLLGM
PHSVRIA
KCVNISIKTPTRGEISHLVIDATGLKVFGEGEWKVRQHGADKRRVWRKLHLAADSATHEIICADLSLSGTTDAQALPELINQTHRKIREASADGAYDTRY
CHDALLRKKIRPLIPPRSGAQYWPDKYHERNHAVANQHLSGGNDVWKKKVSYHRRSIAETAMFRIKSLLGGHLSLRGYDAQVGEAMAMVKALNRMTLLGM
PHSVRIA
Blast result :
Comments
ISEcl3 is 81% aa similar to IS903.
References
1] ISfinder annotation (2010)
2] Yu,Y., Du,X. and Zhou,Z.(2004) Direct submission GenBank
2] Yu,Y., Du,X. and Zhou,Z.(2004) Direct submission GenBank