ISfinder Mirror Site

ISPepr6

Family IS5
Group IS5

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
NC_008607	ND	Pelobacter propionicus	Pelobacter propionicus DSM 2379 plasmid pPRO1

DNA section

IS Length : 1322 bp

Ends

IR Length : 14/16

IRL : CAGGTCTTTGAAAAACAAATAGAGAAAAGCCCCGATTTGTGGTAGTGTTT
IRR : CAGACCTTTGAAAAACTCCCCGATTTTCTCCCTGCCTTCTTCCTTGGCGT

Insertion site

Left flank	Direct repeat	Right flank	DR Length
TAACGATCAG	TTAC	GGTTGTGCCC	4

DNA sequence

CAGGTCTTTGAAAAACAAATAGAGAAAAGCCCCGATTTGTGGTAGTGTTTTGCGCATAACTCACCGTTATTACTGGAGAAAGTTATGCGCGGCTCTGCTG
AATCAAATGGTCCTCTGTTCGTCTATGTCACCACAGAGCAGTTCGTTTCCAAGAACCACCCGCTTCGCTCGCTGAAGCCCCTGGTGGATACGGCTCTTTC
AAAGCTCGACCGTGAATTCGATTCCCTGTACTCATCTACCGGTAGACCGTCCATACCGCCTGAATACCTGCTGAGAGGACTGGTGCTTCAGTTCGTGTAC
TCGGTCCGCAGTCATGTCGCCCTTATGGACCGTATCAATTCCGACATGGCCTTCCGCTGGTTCATTGGTCTTTCAATCGACGACAAGGTCTGGGACCAGA
GCGTATTCTCCTGCAATCAGGACCGCCTGATCCGGGCAGATATCGGTTCTCGGTTTCTGGAAGAGGTCAAGAGCCAGGCCGAGAAGAGGGGGCTGCTCTC
CAACGACCACTTCTCCGTTGACGGCACCCTGCTTGAGTCGCTGGCTTCCATCAAGAGCTTCCGCCGCAAGGATGGCAGCGATGACGACAAGCCTGCCGGC
GATTTCAAGGGAGAGAAATTTTCCAACAAGACGCACCAGTCAAAAACCGACCCGGACGCCCGGCTCTACAAGAAGAGCAAGGGAGCATCCGCCAAGCTCT
GTGTCATGGGGCATGCCATGACCGAAAACGATAATGGCTTTGTCACCCAGATTGAGGCAACCCACGCCGATGGCAAGGCTGAGCGTCGTGCTGCCAAGAA
GATGACGAAGCGTCAGAAGGGCAACCGGAACAAGCGTATCACCGTGGCTGCCGATAAGGCATATGACACTTCCGACTTTGTTCAGGACATGCGAGAAATC
AACGTCACCCCGCATGTTGCCAGCAAGAAGAAGGGATCGGCGATAGATGGCCGCACCACCCGGCATGCCAGCTACCGGCAAAGCCTGAAGGATCGGAAGA
AGATCGAAGAATTCTTCGGCTGGGCCAAGGTCATTGCTGGATTCCGTAAGCTCAGGCATGTCGGGCTTGAGAAGATCAAATTCTACTTCAGTCTGGCCGC
TGGATGTTTCAATCTGGTCAAGCTCAGAAATCTCATTGCCCAAGCGTAGGAGCGATGCGCCCGAACTGCCAAAATGGCATGCAAAAAGGGCAAAAACGAA
CCAGATAACGAGCCAAAGAGCAGAAAAAGCGACCTGAAAAGCCATCAATCCTTCCCAGACAACTCGAGAAAAACGCCAAGGAAGAAGGCAGGGAGAAAAT
CGGGGAGTTTTTCAAAGGTCTG

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
1065 bp	354 aa	85	1149	+	No

ORF function : Transposase
Chemistry : DDE

ORF sequence :

MRGSAESNGPLFVYVTTEQFVSKNHPLRSLKPLVDTALSKLDREFDSLYSSTGRPSIPPEYLLRGLVLQFVYSVRSHVALMDRINSDMAFRWFIGLSIDD
KVWDQSVFSCNQDRLIRADIGSRFLEEVKSQAEKRGLLSNDHFSVDGTLLESLASIKSFRRKDGSDDDKPAGDFKGEKFSNKTHQSKTDPDARLYKKSKG
ASAKLCVMGHAMTENDNGFVTQIEATHADGKAERRAAKKMTKRQKGNRNKRITVAADKAYDTSDFVQDMREINVTPHVASKKKGSAIDGRTTRHASYRQS
LKDRKKIEEFFGWAKVIAGFRKLRHVGLEKIKFYFSLAAGCFNLVKLRNLIAQA

Blast result :

Comments

ISPepr6 is 66% aa similar to ISGsu3.

References

1] ISfinder annotation (2010).
2] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Saunders,E., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Lovley,D. and Richardson,P. (2006) Direct submission GenBank.