ISAzba3
- Family IS5
- Group IS903
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| EU595704 | ND | Azospirillum brasilense | Azospirillum brasilense Sp245 85-MDa plasmid p85 |
DNA section
IS Length : 1112 bp
Ends
IR Length : 18/22
IRL : GGCCTTGTTGCACAAATCCGGCCGGTGCCCCTCTGTTGGCCGGAGAGGCG
IRR : GGCGTTGTTGCGTAAATCCCGCTACGGACAGGCTTTGCGCCTTATCCGCG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| GATGCGCACT | TCAGGCAGCA | 0 |
DNA sequence
GGCCTTGTTGCACAAATCCGGCCGGTGCCCCTCTGTTGGCCGGAGAGGCGGTTGGGGTATAGAGGCGGGCGCTGAAGCCGAGAGCCCGCATGCCGTACAA
GCACAACGAACCACGTCGCCACAAAATCCCGAAGGCCAAATACAAAGTTGAAAACTGGCGGGAGTACAACCGGGCTCTGCGGCAGCGTGGCAGTTTGACG
GTGTGGATCTCGCCCGATGCCCTGGCCATGTGGACGCCGGCCCAGACCGGGCGGCGGGGCCGGCCGCCGGCTTACTCGGACCTCGCGATCGAAACCGGGA
TCATGCTGCGCTTGGCGATGGGCCGCCCATGGCGCCAGACCGAGGGCCTGCTGCGCTCGATCGTCAAGTTGCTCGGCTTGGACCTCCCCGTTCCCGATTA
CACGACGCTGGCCCGGCGCAGCGCCCGGCTTTCACGGACGACGGCGCTGAAGACCCCGACCGGGCCGGTCGACGTCGTCATCGACTCAACCGGTCTGAAG
ATTTCTGGAACCGGCGAGTGGCAGCACGAGAAGCACGGGGGCAGGCCGCGCCGGAGTTGGCGCCGATTGCACTTGGCCATCGATCCGGACAGCGGGGACA
TCCTCGCTGCCGAGCTGACCACCACGGACGACGGCGATGCCTCCCAAGTCGGCCCCCTGCTCGATCAGATCGCTGGCCCGGTCCGGGCCGTGCTGGCCGA
TGGCGCGTATGACGGCGAGCCGGTGTACCATGCCATCGCCGAACGCCACGCCGACGCCGCGGTGATCATTCCACCGCGCTCCACGGCGGTGCTGAGTGAC
ACCGCCACGACCGCCCCCACGCAGCGCGACCAGCATATCCAGTTGCTCGCCGAAAAGGGCCGCATCGGCTGGCAGACGGCCACCGGCTACGGAAAGCGCG
CGCTCGGCGAAACCGCCTTCTCCCGGTACAAAACTGTGATCGGACGCAGCCTGCGGGCCCGAACTCTGTCCGCGCAGAAGGTCGAAGCCCACATCGCCTG
CGCGGTCATCAACCGCATGACCAGCCTCGGCATGCCGGTCTCCGAAAAGGCCGCCTGAGAGCCGCGGATAAGGCGCAAAGCCTGTCCGTAGCGGGATTTA
CGCAACAACGCC
GCACAACGAACCACGTCGCCACAAAATCCCGAAGGCCAAATACAAAGTTGAAAACTGGCGGGAGTACAACCGGGCTCTGCGGCAGCGTGGCAGTTTGACG
GTGTGGATCTCGCCCGATGCCCTGGCCATGTGGACGCCGGCCCAGACCGGGCGGCGGGGCCGGCCGCCGGCTTACTCGGACCTCGCGATCGAAACCGGGA
TCATGCTGCGCTTGGCGATGGGCCGCCCATGGCGCCAGACCGAGGGCCTGCTGCGCTCGATCGTCAAGTTGCTCGGCTTGGACCTCCCCGTTCCCGATTA
CACGACGCTGGCCCGGCGCAGCGCCCGGCTTTCACGGACGACGGCGCTGAAGACCCCGACCGGGCCGGTCGACGTCGTCATCGACTCAACCGGTCTGAAG
ATTTCTGGAACCGGCGAGTGGCAGCACGAGAAGCACGGGGGCAGGCCGCGCCGGAGTTGGCGCCGATTGCACTTGGCCATCGATCCGGACAGCGGGGACA
TCCTCGCTGCCGAGCTGACCACCACGGACGACGGCGATGCCTCCCAAGTCGGCCCCCTGCTCGATCAGATCGCTGGCCCGGTCCGGGCCGTGCTGGCCGA
TGGCGCGTATGACGGCGAGCCGGTGTACCATGCCATCGCCGAACGCCACGCCGACGCCGCGGTGATCATTCCACCGCGCTCCACGGCGGTGCTGAGTGAC
ACCGCCACGACCGCCCCCACGCAGCGCGACCAGCATATCCAGTTGCTCGCCGAAAAGGGCCGCATCGGCTGGCAGACGGCCACCGGCTACGGAAAGCGCG
CGCTCGGCGAAACCGCCTTCTCCCGGTACAAAACTGTGATCGGACGCAGCCTGCGGGCCCGAACTCTGTCCGCGCAGAAGGTCGAAGCCCACATCGCCTG
CGCGGTCATCAACCGCATGACCAGCCTCGGCATGCCGGTCTCCGAAAAGGCCGCCTGAGAGCCGCGGATAAGGCGCAAAGCCTGTCCGTAGCGGGATTTA
CGCAACAACGCC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 969 bp | 322 aa | 90 | 1058 | + | No |
Chemistry : DDE
ORF sequence :
MPYKHNEPRRHKIPKAKYKVENWREYNRALRQRGSLTVWISPDALAMWTPAQTGRRGRPPAYSDLAIETGIMLRLAMGRPWRQTEGLLRSIVKLLGLDLP
VPDYTTLARRSARLSRTTALKTPTGPVDVVIDSTGLKISGTGEWQHEKHGGRPRRSWRRLHLAIDPDSGDILAAELTTTDDGDASQVGPLLDQIAGPVRA
VLADGAYDGEPVYHAIAERHADAAVIIPPRSTAVLSDTATTAPTQRDQHIQLLAEKGRIGWQTATGYGKRALGETAFSRYKTVIGRSLRARTLSAQKVEA
HIACAVINRMTSLGMPVSEKAA
VPDYTTLARRSARLSRTTALKTPTGPVDVVIDSTGLKISGTGEWQHEKHGGRPRRSWRRLHLAIDPDSGDILAAELTTTDDGDASQVGPLLDQIAGPVRA
VLADGAYDGEPVYHAIAERHADAAVIIPPRSTAVLSDTATTAPTQRDQHIQLLAEKGRIGWQTATGYGKRALGETAFSRYKTVIGRSLRARTLSAQKVEA
HIACAVINRMTSLGMPVSEKAA
Blast result :
Comments
References
1] Katsy, E.I. and Prilipov, A.G. (2008) Direct submission.
2] Katsy,E.I. and Prilipov,A.G. (2009) Plasmid 62 (1), 22-29
2] Katsy,E.I. and Prilipov,A.G. (2009) Plasmid 62 (1), 22-29