ISAba11
- Family IS701
- Group ISAba11
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP000521 | ND | Acinetobacter baumannii | Enhydrobacter aerosaccus SK60 Acinetobacter baumannii ATCC 17978 Acinetobacter baumannii ATCC 19606 Acinetobacter baumannii 6013150 Acinetobacter sp. ATCC 27244 |
DNA section
IS Length : 1101 bp
Ends
IR Length : 13
IRL : TAGGACTTACGCATTGACGGATTCAAAAAAGTATTAAAATACTTTATAAA
IRR : TAGGACTTACGCACTATCATTTATAGATTCTCTGTGGTAGCAGATGATTT
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| AAACAAGATT | ATATG | ATCAGTATTG | 5 |
DNA sequence
TAGGACTTACGCATTGACGGATTCAAAAAAGTATTAAAATACTTTATAAAGTATCTGTGATCAGACGAATTAAAAATGCTTCTACAGCAACTTGTACTCT
ACCCATTTATATGGGCTTTCTCATGACAGAACCGAACTCTATTAGCTGCACACAACTTGCCGAGACTTATAATATCTCGCATGATAGTGTAAATCGCTTT
CTAGAGCGTGAAGACTACACACCTCACGACCTATATCAAGAAGCAATTCAACATATTGATAATAATAAACTTATAGTCAGTATTGATGATACTGTTTTAG
ATAAACCATATAGTCAACATATGGACTTAGTTAGCTATTTTTGGTCAGGCAAACACCACCGATCCGTCAAGGGTATTAATCTCATTACCTTGTATGCGAC
AGATCAAAATGGTCAAAATATTCCAATTAATTTCCGAATTTATGACAAATCTGAAAGTAAAACCAAGAATGATTACTTTATGGATATGTTAAGTGAAGTA
CTCAGTTGGGGTGCAAAGATTCAATTTATTACAGGTGATAGTTGGTATTCATCGACTGGAAATCTAAAAACCATAAGAAAATATGGTATTCGATTTATGT
TTGGTATCGACTGTAACCGTAAGGTTTCCCCAGAAAAAGGACAATTGTTTCAACTGCGTTTATTGCCAGATTTCCATCAGGGTCAAGTGGTCTGGCTCAA
AGATTTTGGCTTTGTACAATTATTTAAGACTCAGTTAAAAGAACAGCAGAGGTTTTATATTGTGCATCAAGATGAAGATGATTTATTGTCCTTTGAGGGT
TTTCATGAATTACATTCAAGTCATTGGAAAATAGAACAATATCACCGAGTGATTAAACAGGTTTGTCATATTGAAAAGTTTCAAGTAAGACGATCTAAAC
TGATTTTGAATCATATTTTTTCAGCCTTGATGGCCTACGTCGAGATACAAAAGAACCAGTTTGAGGGGATCTTTGAAAATGTATATCGTTGGCAGAAGAA
ATTATTTAGACCAATCATCAAAGACTTCATTGATGACTTTATTCTCGATAAAAATCATCTGCTACCACAGAGAATCTATAAATGATAGTGCGTAAGTCCT
A
ACCCATTTATATGGGCTTTCTCATGACAGAACCGAACTCTATTAGCTGCACACAACTTGCCGAGACTTATAATATCTCGCATGATAGTGTAAATCGCTTT
CTAGAGCGTGAAGACTACACACCTCACGACCTATATCAAGAAGCAATTCAACATATTGATAATAATAAACTTATAGTCAGTATTGATGATACTGTTTTAG
ATAAACCATATAGTCAACATATGGACTTAGTTAGCTATTTTTGGTCAGGCAAACACCACCGATCCGTCAAGGGTATTAATCTCATTACCTTGTATGCGAC
AGATCAAAATGGTCAAAATATTCCAATTAATTTCCGAATTTATGACAAATCTGAAAGTAAAACCAAGAATGATTACTTTATGGATATGTTAAGTGAAGTA
CTCAGTTGGGGTGCAAAGATTCAATTTATTACAGGTGATAGTTGGTATTCATCGACTGGAAATCTAAAAACCATAAGAAAATATGGTATTCGATTTATGT
TTGGTATCGACTGTAACCGTAAGGTTTCCCCAGAAAAAGGACAATTGTTTCAACTGCGTTTATTGCCAGATTTCCATCAGGGTCAAGTGGTCTGGCTCAA
AGATTTTGGCTTTGTACAATTATTTAAGACTCAGTTAAAAGAACAGCAGAGGTTTTATATTGTGCATCAAGATGAAGATGATTTATTGTCCTTTGAGGGT
TTTCATGAATTACATTCAAGTCATTGGAAAATAGAACAATATCACCGAGTGATTAAACAGGTTTGTCATATTGAAAAGTTTCAAGTAAGACGATCTAAAC
TGATTTTGAATCATATTTTTTCAGCCTTGATGGCCTACGTCGAGATACAAAAGAACCAGTTTGAGGGGATCTTTGAAAATGTATATCGTTGGCAGAAGAA
ATTATTTAGACCAATCATCAAAGACTTCATTGATGACTTTATTCTCGATAAAAATCATCTGCTACCACAGAGAATCTATAAATGATAGTGCGTAAGTCCT
A
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1029 bp | 342 aa | 57 | 1085 | + | No |
Chemistry : DDE
ORF sequence :
VIRRIKNASTATCTLPIYMGFLMTEPNSISCTQLAETYNISHDSVNRFLEREDYTPHDLYQEAIQHIDNNKLIVSIDDTVLDKPYSQHMDLVSYFWSGKH
HRSVKGINLITLYATDQNGQNIPINFRIYDKSESKTKNDYFMDMLSEVLSWGAKIQFITGDSWYSSTGNLKTIRKYGIRFMFGIDCNRKVSPEKGQLFQL
RLLPDFHQGQVVWLKDFGFVQLFKTQLKEQQRFYIVHQDEDDLLSFEGFHELHSSHWKIEQYHRVIKQVCHIEKFQVRRSKLILNHIFSALMAYVEIQKN
QFEGIFENVYRWQKKLFRPIIKDFIDDFILDKNHLLPQRIYK
HRSVKGINLITLYATDQNGQNIPINFRIYDKSESKTKNDYFMDMLSEVLSWGAKIQFITGDSWYSSTGNLKTIRKYGIRFMFGIDCNRKVSPEKGQLFQL
RLLPDFHQGQVVWLKDFGFVQLFKTQLKEQQRFYIVHQDEDDLLSFEGFHELHSSHWKIEQYHRVIKQVCHIEKFQVRRSKLILNHIFSALMAYVEIQKN
QFEGIFENVYRWQKKLFRPIIKDFIDDFILDKNHLLPQRIYK
Blast result :
Comments
ISAba11 is 65% aa similar to ISAcma22.
ISAba11 was found in transposon Tn6021 of strain ATCC17978.
ISAba11 was found in transposon Tn6021 of strain ATCC17978.
References
1] Post (2009) Direct submission to ISfinder
2] Smith,M.G., Gianoulis,T.A., Pukatzki,S., Mekalanos,J.J., Ornston,L.N., Gerstein,M. and Snyder,M. (2007) Genes Dev. 21 (5), 601-614
2] Smith,M.G., Gianoulis,T.A., Pukatzki,S., Mekalanos,J.J., Ornston,L.N., Gerstein,M. and Snyder,M. (2007) Genes Dev. 21 (5), 601-614