ISAba11

  • Family IS701
  • Group ISAba11
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP000521 ND Acinetobacter baumannii
Enhydrobacter aerosaccus SK60
Acinetobacter baumannii ATCC 17978
Acinetobacter baumannii ATCC 19606
Acinetobacter baumannii 6013150
Acinetobacter sp. ATCC 27244
DNA section
IS Length : 1101 bp

Ends


IR Length : 13

IRL : TAGGACTTACGCATTGACGGATTCAAAAAAGTATTAAAATACTTTATAAA
IRR : TAGGACTTACGCACTATCATTTATAGATTCTCTGTGGTAGCAGATGATTT

Insertion site


Left flankDirect repeatRight flankDR Length
AAACAAGATTATATGATCAGTATTG5

DNA sequence

TAGGACTTACGCATTGACGGATTCAAAAAAGTATTAAAATACTTTATAAAGTATCTGTGATCAGACGAATTAAAAATGCTTCTACAGCAACTTGTACTCT
ACCCATTTATATGGGCTTTCTCATGACAGAACCGAACTCTATTAGCTGCACACAACTTGCCGAGACTTATAATATCTCGCATGATAGTGTAAATCGCTTT
CTAGAGCGTGAAGACTACACACCTCACGACCTATATCAAGAAGCAATTCAACATATTGATAATAATAAACTTATAGTCAGTATTGATGATACTGTTTTAG
ATAAACCATATAGTCAACATATGGACTTAGTTAGCTATTTTTGGTCAGGCAAACACCACCGATCCGTCAAGGGTATTAATCTCATTACCTTGTATGCGAC
AGATCAAAATGGTCAAAATATTCCAATTAATTTCCGAATTTATGACAAATCTGAAAGTAAAACCAAGAATGATTACTTTATGGATATGTTAAGTGAAGTA
CTCAGTTGGGGTGCAAAGATTCAATTTATTACAGGTGATAGTTGGTATTCATCGACTGGAAATCTAAAAACCATAAGAAAATATGGTATTCGATTTATGT
TTGGTATCGACTGTAACCGTAAGGTTTCCCCAGAAAAAGGACAATTGTTTCAACTGCGTTTATTGCCAGATTTCCATCAGGGTCAAGTGGTCTGGCTCAA
AGATTTTGGCTTTGTACAATTATTTAAGACTCAGTTAAAAGAACAGCAGAGGTTTTATATTGTGCATCAAGATGAAGATGATTTATTGTCCTTTGAGGGT
TTTCATGAATTACATTCAAGTCATTGGAAAATAGAACAATATCACCGAGTGATTAAACAGGTTTGTCATATTGAAAAGTTTCAAGTAAGACGATCTAAAC
TGATTTTGAATCATATTTTTTCAGCCTTGATGGCCTACGTCGAGATACAAAAGAACCAGTTTGAGGGGATCTTTGAAAATGTATATCGTTGGCAGAAGAA
ATTATTTAGACCAATCATCAAAGACTTCATTGATGACTTTATTCTCGATAAAAATCATCTGCTACCACAGAGAATCTATAAATGATAGTGCGTAAGTCCT
A
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1029 bp342 aa571085+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

VIRRIKNASTATCTLPIYMGFLMTEPNSISCTQLAETYNISHDSVNRFLEREDYTPHDLYQEAIQHIDNNKLIVSIDDTVLDKPYSQHMDLVSYFWSGKH
HRSVKGINLITLYATDQNGQNIPINFRIYDKSESKTKNDYFMDMLSEVLSWGAKIQFITGDSWYSSTGNLKTIRKYGIRFMFGIDCNRKVSPEKGQLFQL
RLLPDFHQGQVVWLKDFGFVQLFKTQLKEQQRFYIVHQDEDDLLSFEGFHELHSSHWKIEQYHRVIKQVCHIEKFQVRRSKLILNHIFSALMAYVEIQKN
QFEGIFENVYRWQKKLFRPIIKDFIDDFILDKNHLLPQRIYK

 

Blast result :
Comments
ISAba11 is 65% aa similar to ISAcma22.
ISAba11 was found in transposon Tn6021 of strain ATCC17978.
References
1] Post (2009) Direct submission to ISfinder
2] Smith,M.G., Gianoulis,T.A., Pukatzki,S., Mekalanos,J.J., Ornston,L.N., Gerstein,M. and Snyder,M. (2007) Genes Dev. 21 (5), 601-614