ISAar31

  • Family IS630
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Arthrobacter arilaitensis
Arthrobacter arilaitensis RE117
DNA section
IS Length : 1155 bp

Ends


IR Length : 16/23

IRL : TGGCGGGCACAGTTCAAAATCGGATTCGATAACCTAAACCCGACCGGCGC
IRR : TGGCTCTCTTATTTCAAAAACGGTCGGCCAACCCTCAAATCTTGTAATCA

Insertion site


Left flankDirect repeatRight flankDR Length
TGCATATTGATAGTTCCTCAAT2

DNA sequence

TGGCGGGCACAGTTCAAAATCGGATTCGATAACCTAAACCCGACCGGCGCGTTAATCCTCTAACGCCGACCAGAGAATGTTAATTTTTGGGTATGCGAAA
CCCCGAGGTCACCGATAAAGAACGCCAACAGCTCAAAGACTACAAAAACACCGCACCACACAAGCTCGTCGTGAAGAAAGCAGAAGCTTTACTACTGCTG
TCTGCTGGTGTTGATCCGGTGATTGTTGCTGACTTCGTGGACCGTGAACCTTCCACGTTGGAGGACTGGGTCCGAGACTGGTGCACGCAGCGCATGGCGT
CCTTGTTCACTGGTCACGCGGGAAATCTGAATCGAAGCTTCTTGACCGCGGAGCAAAAAGAAGCCGTGGAACAGGTGCTTTCCCAGCCGCCGGGTGATGA
GTATTTGCCGGCGCAGTTCTGGGATGTTCCTAAACTAGATCGCTGGTTATCGACTACGTTCAACGTTGAGTATGCTTCGCCCACGTCGTATCAGTTCTTG
TTGCGTATGGCGGGGTTGTCTTTTCATAAGCCGGAGAAGTTTGACCGGCGGCGAGCCGATGACAAGCTCATTGACCAGCGAATCAAAGAGATCCGGGAAG
AACTCGCGGTTCCTTTGGCTGATGAGGATACGTTGGTGTCCGCTGCGGACGAGGTACGTATTGATCAGGAAGCTGTGGTGCGGCGGGCTTGGTATGAGAA
GAATACGAAAACGGTGTTGCAGGTGGACCGGCAGAAGGCTTCGCAGTCGTTTATTGGGTTCTTGGATCAGAACACTGGGCAGTGTTTGACGTTGAGGTTG
GATTGGCAGAATAGTGCCACGATCTTAGAGGCGGTGCAAACCTTGGTGGGGTTGTATCCGGGGAAGAAGATCGTGATTGTGTGGGATAACGCGACGTGGC
ATAAGAATCAGTTGCTGCGTGCTGAACTGGGCCTGGGGCAGTCGTTACGGGATGTTCATTTGATCAATTTTCCGCCGTATGCTCCGGATCATAATCCGAT
TGAGCATGTGTGGAATGATGCGAAGAACGCGATTAGCAATGTTCAGCGGGATGATTTTGAGTCGACGGTGACGGCGTTTGAGGCGCATACCCGGTCGCGG
TCGTTTGATTACAAGATTTGAGGGTTGGCCGACCGTTTTTGAAATAAGAGAGCCA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1035 bp344 aa871121+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

LGMRNPEVTDKERQQLKDYKNTAPHKLVVKKAEALLLLSAGVDPVIVADFVDREPSTLEDWVRDWCTQRMASLFTGHAGNLNRSFLTAEQKEAVEQVLSQ
PPGDEYLPAQFWDVPKLDRWLSTTFNVEYASPTSYQFLLRMAGLSFHKPEKFDRRRADDKLIDQRIKEIREELAVPLADEDTLVSAADEVRIDQEAVVRR
AWYEKNTKTVLQVDRQKASQSFIGFLDQNTGQCLTLRLDWQNSATILEAVQTLVGLYPGKKIVIVWDNATWHKNQLLRAELGLGQSLRDVHLINFPPYAP
DHNPIEHVWNDAKNAISNVQRDDFESTVTAFEAHTRSRSFDYKI

 

Blast result :
Comments
ISAar31 is 67% aa similarto IS14999.
References
1] ISfinder annotation (2009)