ISAzba8
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Azospirillum brasilense | Azospirillum brasilense plasmid p2AZOBRv1 |
DNA section
IS Length : 1321 bp
Ends
IR Length : 31
IRL : GGGAGTGTCCGGAATTTCGTGCTCGGCGGGGTTATCCTGAAGCGAAAGGA
IRR : GGGAGTGTCCGGAATTTCGTGCTCGGCGGGGCGGGTTGAGTATCAGGCGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GGGATCAGCAG | CCACTACAC | GAGGCGTGTC | 9 |
DNA sequence
GGGAGTGTCCGGAATTTCGTGCTCGGCGGGGTTATCCTGAAGCGAAAGGAGCCCCTGCATGGCACGACGCAAAGAGCCGGTCATCCCGGACGCAATCCTC
GACCAGCTGTTGGCCGGTGCTGACGCCAAGACGGCGTTCGATCCGAACGGCCTGCTCGACCAATTGAAGAAGGCGCTGACGGAGCGGGCGCTGAAGGCGG
AGTTGGATCATCACCTGGCCGGTGACGAGAGTGGCAACCGGCGCAACGGCTACGGCCGCAAGACGGTGCTGACCGAGCGTGGGTCGATGGACCTGTCCAT
TCCACGCGACCGGACGGGCACGTTCGACCCGGCGCTGATCGCCAAGTACCAACGGCGCTTCCCCGGCTTCGACGAGAAGATCATCTCGATGTACGCGCGA
GGCATGTCGACGCGGGAGATCACCGGGCATCTGCGGGAACTCTATGGCATCGAGGTCTCGGCCGACCTGATCTCCACGGTGACGGACGCGGTGATCGAGG
AGGTGACGACGTGGCAAAACCGGCCCCTGGAGGCGATCTACCCGCTGGTGTTCCTGGAAGCCCTCCGGTCAAGATCCGGGGAGAAAGGCTGGTGGGCAAA
CAAGGCCATCCAGGTGGCCATCGGCGTGCGCGCCGACGCGCCCAAGAAGGTGCTGGGCCTGTGGATCGAGCAGACCGAAGGCGCCAAGTTCTGGCTGCGC
GTGCTGAACGAGCTGAGGAACCGGGGCGTCGAGGACATCCTGCTGGCCGTGGTCGACGGGCTGAAGGGCTTTCCCGAGGCGATCGCCGCCGCCTATCCCG
AAACCATCGTCCAGACCTGCATCGTCCACCTGTTGCGCCACAGCATGGAGTTCGCGTCCTGGAAGGAGCGCAAGACCATCGCCGCCGCGCTGAAGACGGT
CTACGACGCCGTCGACGACAAGGCCGCCGAGGCGGCCCTGACCGCCTTCGAGGACGGACCCTGGGGTGAAAAGTACGCGGCCATCGGCAAGGCGTGGCGA
CGGGCGTGGCAGGAGGTCATTCCCTTCTTCGCCTTCCCCCGCGAGGTCCGGCGCATCCTCTACACCACCAATGCCATCGAGGCTTTGAACTCGAAGCTGC
GCCGGGCGGTGCGCGCCAGGGGCCACTTCCCCAATGACGAGGCGGCCCTGAAGCTCCTGTTTCTCGTCTTGAACCGCGCCGAGAAAGACTGGAAGATGCC
GCCGCGCGAATGGACGGCCGCCAAGGCGCAGATGGCCGTCATCTTCGGCGAGCGGTTCGCAAAGGCGATGAACGCCTGATACTCAACCCGCCCCGCCGAG
CACGAAATTCCGGACACTCCC
GACCAGCTGTTGGCCGGTGCTGACGCCAAGACGGCGTTCGATCCGAACGGCCTGCTCGACCAATTGAAGAAGGCGCTGACGGAGCGGGCGCTGAAGGCGG
AGTTGGATCATCACCTGGCCGGTGACGAGAGTGGCAACCGGCGCAACGGCTACGGCCGCAAGACGGTGCTGACCGAGCGTGGGTCGATGGACCTGTCCAT
TCCACGCGACCGGACGGGCACGTTCGACCCGGCGCTGATCGCCAAGTACCAACGGCGCTTCCCCGGCTTCGACGAGAAGATCATCTCGATGTACGCGCGA
GGCATGTCGACGCGGGAGATCACCGGGCATCTGCGGGAACTCTATGGCATCGAGGTCTCGGCCGACCTGATCTCCACGGTGACGGACGCGGTGATCGAGG
AGGTGACGACGTGGCAAAACCGGCCCCTGGAGGCGATCTACCCGCTGGTGTTCCTGGAAGCCCTCCGGTCAAGATCCGGGGAGAAAGGCTGGTGGGCAAA
CAAGGCCATCCAGGTGGCCATCGGCGTGCGCGCCGACGCGCCCAAGAAGGTGCTGGGCCTGTGGATCGAGCAGACCGAAGGCGCCAAGTTCTGGCTGCGC
GTGCTGAACGAGCTGAGGAACCGGGGCGTCGAGGACATCCTGCTGGCCGTGGTCGACGGGCTGAAGGGCTTTCCCGAGGCGATCGCCGCCGCCTATCCCG
AAACCATCGTCCAGACCTGCATCGTCCACCTGTTGCGCCACAGCATGGAGTTCGCGTCCTGGAAGGAGCGCAAGACCATCGCCGCCGCGCTGAAGACGGT
CTACGACGCCGTCGACGACAAGGCCGCCGAGGCGGCCCTGACCGCCTTCGAGGACGGACCCTGGGGTGAAAAGTACGCGGCCATCGGCAAGGCGTGGCGA
CGGGCGTGGCAGGAGGTCATTCCCTTCTTCGCCTTCCCCCGCGAGGTCCGGCGCATCCTCTACACCACCAATGCCATCGAGGCTTTGAACTCGAAGCTGC
GCCGGGCGGTGCGCGCCAGGGGCCACTTCCCCAATGACGAGGCGGCCCTGAAGCTCCTGTTTCTCGTCTTGAACCGCGCCGAGAAAGACTGGAAGATGCC
GCCGCGCGAATGGACGGCCGCCAAGGCGCAGATGGCCGTCATCTTCGGCGAGCGGTTCGCAAAGGCGATGAACGCCTGATACTCAACCCGCCCCGCCGAG
CACGAAATTCCGGACACTCCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1221 bp | 406 aa | 59 | 1279 | + | No |
Chemistry : DDE
ORF sequence :
MARRKEPVIPDAILDQLLAGADAKTAFDPNGLLDQLKKALTERALKAELDHHLAGDESGNRRNGYGRKTVLTERGSMDLSIPRDRTGTFDPALIAKYQRR
FPGFDEKIISMYARGMSTREITGHLRELYGIEVSADLISTVTDAVIEEVTTWQNRPLEAIYPLVFLEALRSRSGEKGWWANKAIQVAIGVRADAPKKVLG
LWIEQTEGAKFWLRVLNELRNRGVEDILLAVVDGLKGFPEAIAAAYPETIVQTCIVHLLRHSMEFASWKERKTIAAALKTVYDAVDDKAAEAALTAFEDG
PWGEKYAAIGKAWRRAWQEVIPFFAFPREVRRILYTTNAIEALNSKLRRAVRARGHFPNDEAALKLLFLVLNRAEKDWKMPPREWTAAKAQMAVIFGERF
AKAMNA
FPGFDEKIISMYARGMSTREITGHLRELYGIEVSADLISTVTDAVIEEVTTWQNRPLEAIYPLVFLEALRSRSGEKGWWANKAIQVAIGVRADAPKKVLG
LWIEQTEGAKFWLRVLNELRNRGVEDILLAVVDGLKGFPEAIAAAYPETIVQTCIVHLLRHSMEFASWKERKTIAAALKTVYDAVDDKAAEAALTAFEDG
PWGEKYAAIGKAWRRAWQEVIPFFAFPREVRRILYTTNAIEALNSKLRRAVRARGHFPNDEAALKLLFLVLNRAEKDWKMPPREWTAAKAQMAVIFGERF
AKAMNA
Blast result :
Comments
ISAzba8 is 78% aa similar to ISRm3.
References
1] ISfinder annotation (2009).