ISAar15

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Arthrobacter arilaitensis
Arthrobacter arilaitensis RE117
DNA section
IS Length : 1418 bp

Ends


IR Length : 19/24

IRL : GGCTCTTCGATTTTTAGCGTGGTGACCCGAAAAAGAAGTAAGGCTCGCAG
IRR : GGCTCTTAAAAGTTAAGCGTGGTGCAGGATGTTCAGCACGGCCGTAGGCC

Insertion site


Left flankDirect repeatRight flankDR Length
CCGGTGCTGGTTCAAACCTCGATTTCGG8
CAAAAAGTAGATTAAAGATGGTTTTAAT8
TCGTTTCCGGTGTAATCCCCAAGTACAT8
AGGAAGAAGTCATATTCCTCTTCGAAAT8
TGTTGATGGTTTCATAGTCGAGCAGGTC8

DNA sequence

GGCTCTTCGATTTTTAGCGTGGTGACCCGAAAAAGAAGTAAGGCTCGCAGTCCCTTCTGCGAAAATGGATGTTGACTAAAACAATTCATACGCAAGGAAC
TACGAGCCGTGATCAAGGATACCGGCCGAATCGATGCTGCGTCGATTCTGTTGAACCTCACCGACTACCGCGTCATCACCGTGACTCAGGAACTTGCCGG
ACGGCAGGTACTTGTTGAGCCCATCGAAACCGAAGCCGCTTGCCCCTCCTGCGGGGTACTGACTACCCGAATCCAAGCAAGGCCGGTGCACCAGGTCAAG
GACCTGCCCGCCGGCGGTGACGACCTGCAGGTGTTGGTACGCAAACGCCGCATGGCCTGCCAAGAACCTGCCTGCGAACGCCGTTCGTTCGTGCAAACCA
CCGAGCAACTGCCCTTCCGCGCACGGATCACCACCAGGCTCTCCCAACGGCTCGTGGACGAGATGAGCTGCGAACTGCGAGCCGTGTCCCGGGTCGCCGC
AGCGCATGGGGTGTCATGGCCAACGGTCATGGCCCGACTGACCACCGTCGGTGAACTCGTCGGGAATGTGGACCGGATGTTCATCCGGCGCCTGGGCATC
GATGAGCACCGGTTCCGCAAAGTCCGCTACGCCCTTGGCCGGACCGGGAAAGTCGTTCGGATTGAGCCGTGGTCCATCGTCTTCACCGATCTGGACACCG
GAAAGATCCTGGATATCGTGGACGGACGCCGCGGAACAGCGGTAAAGAAGTGGTTGAAGAACCGGCCACGGTATTGGCGCCAACGGGTGCAGTACGTCGC
GATCGACATGTCTGCCGAGTTCCGCAAAGCGGTGCGTGAGAATCTGCCCAAGGCGAAGGTCAGCGTGGACCATTTCCACGTGATCGCCCGGGCGAATCTG
ATGATCACCCAGGTCCGCCGCCGCCGTTCCCACGAAGTGCACGAACGCCGTGGCAGGGCCACGGATCCGGCCTACAAGTACCGGAAGCTACTAACCTGCA
ACTTAGAGAACCTGTCGATCAAGCAGGTGGAACGGCTGAAGCTGATCCTTGAATCAGACCCGGAACTCGGAGTGATCTATGGAATCAAGGAACACGTGCG
GCAACTGCTGAAAACCGCTGATATCCATGAATTCCAGTCCCGGTGGGCGGTGCTGGAGAAATCAGTGAAGGCCACAAAAATGACCGAGGCGAAAACATTG
TTCCGCACGTTGACCGCCTGGCGGCGGGAGCTGCTGGTGTTCGTACGAACGAGGTTGACCAACGCCCGGAGCGAGGCGGCGAACCTGACGGCGAAGAACC
TGAAACGCATCGGTCGAGGCTATCGGAATCATGGTCATTATCGGCTTCGGATATTGTTGTACACGGCGGGCCTACGGCCGTGCTGAACATCCTGCACCAC
GCTTAACTTTTAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1278 bp425 aa1091386+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

VIKDTGRIDAASILLNLTDYRVITVTQELAGRQVLVEPIETEAACPSCGVLTTRIQARPVHQVKDLPAGGDDLQVLVRKRRMACQEPACERRSFVQTTEQ
LPFRARITTRLSQRLVDEMSCELRAVSRVAAAHGVSWPTVMARLTTVGELVGNVDRMFIRRLGIDEHRFRKVRYALGRTGKVVRIEPWSIVFTDLDTGKI
LDIVDGRRGTAVKKWLKNRPRYWRQRVQYVAIDMSAEFRKAVRENLPKAKVSVDHFHVIARANLMITQVRRRRSHEVHERRGRATDPAYKYRKLLTCNLE
NLSIKQVERLKLILESDPELGVIYGIKEHVRQLLKTADIHEFQSRWAVLEKSVKATKMTEAKTLFRTLTAWRRELLVFVRTRLTNARSEAANLTAKNLKR
IGRGYRNHGHYRLRILLYTAGLRPC

 

Blast result :
Comments
ISAar15 is 94% aa similar to ISAar14.
References
1] ISfinder annotation (2009).