ISAnsp13
- Family ISAs1
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_009675 | ND | Anaeromyxobacter sp. | Anaeromyxobacter sp. Fw109-5 |
DNA section
IS Length : 1367 bp
Ends
IR Length : 15/20
IRL : AAGGGGTGGAGCTTGCGGGCTTGCGGGCCCCACCCCCAAGACGGCCGAAC
IRR : AAGGGGGCGGCCTGCGGGCCGGTGGTTCAGGTGACAGCTGAGGCGAGCTC
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| CTCCGCGCAAATGAG | CTTCATTGCGCGCAG | 0 |
DNA sequence
AAGGGGTGGAGCTTGCGGGCTTGCGGGCCCCACCCCCAAGACGGCCGAACCCGCGCAAACGAGAAGAGGCCAGGAGGCAGGAGATCATGCCGATCACCGA
AGCACAAGCCCGGCGTGCCATGCGGCACGCCGACATCCCCTGGGACCGGGAGGTCGACGACCCCCGAGAGGACGCGTGGGTCGTTCACGACCACCTCGGT
CTCTTGGGCGGCCTGGCCGCCGCGTTCTCCATCGGGTGCCGGAGCCTGCGCCGCGCGGAGGACTTCTTCGCGGACCTCGGCCTGCGCGCTCGGGCTCGGC
CGCGGGAAGCCGTGCGACACCACGCTGTACCGCCTCCTCGCCGAGCAGTCCCCGGCCGGCCTCGAGGAGACGGTCTTTGCCCAGGTGAAGGACCTCATCG
CCCGCAAGGTGGTGCGCAACGACCTCCTCGCGCTCGGCGTCGTGAGCTTCGACGGCAAGGGGACCTGGTCGCGCACCGATGGGGAGAAGGTGAAGGGCGC
CCAGCAGTCGGCGTACGACGCCGAGGGCTCGTCGCTGCAGACCTTCGGAGCGCTCCGCGCCGCCCTCACCTCCTCCTCGGTCTGTCCCTGCGTCGGGCAG
AGGCTCATCGGCTCCAAGGAGGGCGAGTCCACCGCGTTCCGGCGGTTGCTCCCGGCCATCAGCGAGCAGCTGGGCGGGCAGTTCCGCATCGTCACCGGCG
ACGCCGGCCTCTGCGCCCGCGAGAACGCGGAGCTCGTGACCTCGCTCGGCCGCTGGTACGTTTTCGGCTTGAAGGACAACCAGCCCTACCTGCACGACAT
CGCCCGCGACTACGGGCAGTACGACCTCGGCACCCCGCTCGCCCGGACCGCGGAGCGGTACAGAGGCCACACCATCGTGCGCGAACTGTACGCTCGCGAC
GTCGCCGGCAATCCCGCCGCCGCCATCGAGGCCGCCCAGCAGCTCTGGTACGTCTGCCAGACGACGACCGACCGGCGCGGCGAGATCGTGGCCGTCGAGC
AGCGCTACTTCGTCACATCGATACCCACCGGCACGCTGACCCGCGACCAGGAGCTGGCGCTCGTCCGGATGCACTGGGCCATCGAGAACGGCTGCCACTG
GACGATGGACGTCATGCTCGGTGAGGACGAGGGCCACCCTTGCCAGGCGAGCCGGGCCTCCATCGAGACCGTCAGCTGGCTCAGGCTCATCGGCTACAAC
GCGGTCAGCGCCTGGCGGACCCTGGCGCCTCGCAAGGACGGCAGGCCCGTCGCCTGGGCCCGCGCCATGGAGACGCTCCGCGACGCGCTCCTTGCCGCCG
AGGTCACCGATCACCGCGAGCTCGCCTCAGCTGTCACCTGAACCACCGGCCCGCAGGCCGCCCCCTT
AGCACAAGCCCGGCGTGCCATGCGGCACGCCGACATCCCCTGGGACCGGGAGGTCGACGACCCCCGAGAGGACGCGTGGGTCGTTCACGACCACCTCGGT
CTCTTGGGCGGCCTGGCCGCCGCGTTCTCCATCGGGTGCCGGAGCCTGCGCCGCGCGGAGGACTTCTTCGCGGACCTCGGCCTGCGCGCTCGGGCTCGGC
CGCGGGAAGCCGTGCGACACCACGCTGTACCGCCTCCTCGCCGAGCAGTCCCCGGCCGGCCTCGAGGAGACGGTCTTTGCCCAGGTGAAGGACCTCATCG
CCCGCAAGGTGGTGCGCAACGACCTCCTCGCGCTCGGCGTCGTGAGCTTCGACGGCAAGGGGACCTGGTCGCGCACCGATGGGGAGAAGGTGAAGGGCGC
CCAGCAGTCGGCGTACGACGCCGAGGGCTCGTCGCTGCAGACCTTCGGAGCGCTCCGCGCCGCCCTCACCTCCTCCTCGGTCTGTCCCTGCGTCGGGCAG
AGGCTCATCGGCTCCAAGGAGGGCGAGTCCACCGCGTTCCGGCGGTTGCTCCCGGCCATCAGCGAGCAGCTGGGCGGGCAGTTCCGCATCGTCACCGGCG
ACGCCGGCCTCTGCGCCCGCGAGAACGCGGAGCTCGTGACCTCGCTCGGCCGCTGGTACGTTTTCGGCTTGAAGGACAACCAGCCCTACCTGCACGACAT
CGCCCGCGACTACGGGCAGTACGACCTCGGCACCCCGCTCGCCCGGACCGCGGAGCGGTACAGAGGCCACACCATCGTGCGCGAACTGTACGCTCGCGAC
GTCGCCGGCAATCCCGCCGCCGCCATCGAGGCCGCCCAGCAGCTCTGGTACGTCTGCCAGACGACGACCGACCGGCGCGGCGAGATCGTGGCCGTCGAGC
AGCGCTACTTCGTCACATCGATACCCACCGGCACGCTGACCCGCGACCAGGAGCTGGCGCTCGTCCGGATGCACTGGGCCATCGAGAACGGCTGCCACTG
GACGATGGACGTCATGCTCGGTGAGGACGAGGGCCACCCTTGCCAGGCGAGCCGGGCCTCCATCGAGACCGTCAGCTGGCTCAGGCTCATCGGCTACAAC
GCGGTCAGCGCCTGGCGGACCCTGGCGCCTCGCAAGGACGGCAGGCCCGTCGCCTGGGCCCGCGCCATGGAGACGCTCCGCGACGCGCTCCTTGCCGCCG
AGGTCACCGATCACCGCGAGCTCGCCTCAGCTGTCACCTGAACCACCGGCCCGCAGGCCGCCCCCTT
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1329 bp | 442 aa | 13 | 1341 | + | No |
Chemistry : Unknow
ORF sequence :
MRACGPHPQDGRTRANEKRPGGRRSCRSPKHKPGVPCGTPTSPGTGRSTTPERTRGSFTTTSVSWAAWPPRSPSGAGACAARRTSSRTSACALGLGRGKP
CDTTLYRLLAEQSPAGLEETVFAQVKDLIARKVVRNDLLALGVVSFDGKGTWSRTDGEKVKGAQQSAYDAEGSSLQTFGALRAALTSSSVCPCVGQRLIG
SKEGESTAFRRLLPAISEQLGGQFRIVTGDAGLCARENAELVTSLGRWYVFGLKDNQPYLHDIARDYGQYDLGTPLARTAERYRGHTIVRELYARDVAGN
PAAAIEAAQQLWYVCQTTTDRRGEIVAVEQRYFVTSIPTGTLTRDQELALVRMHWAIENGCHWTMDVMLGEDEGHPCQASRASIETVSWLRLIGYNAVSA
WRTLAPRKDGRPVAWARAMETLRDALLAAEVTDHRELASAVT
CDTTLYRLLAEQSPAGLEETVFAQVKDLIARKVVRNDLLALGVVSFDGKGTWSRTDGEKVKGAQQSAYDAEGSSLQTFGALRAALTSSSVCPCVGQRLIG
SKEGESTAFRRLLPAISEQLGGQFRIVTGDAGLCARENAELVTSLGRWYVFGLKDNQPYLHDIARDYGQYDLGTPLARTAERYRGHTIVRELYARDVAGN
PAAAIEAAQQLWYVCQTTTDRRGEIVAVEQRYFVTSIPTGTLTRDQELALVRMHWAIENGCHWTMDVMLGEDEGHPCQASRASIETVSWLRLIGYNAVSA
WRTLAPRKDGRPVAWARAMETLRDALLAAEVTDHRELASAVT
Blast result :
Comments
ISAnsp13 is 41% aa similar to ISBlma7.
References
1] ISfinder annotation (2009)
2] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A., Fields,M. and Richardson,P.(2007) Direct submission GenBank.
2] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A., Fields,M. and Richardson,P.(2007) Direct submission GenBank.