ISfinder Mirror Site

ISAcr3

Family ISAs1
Group

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
CP000691	ND	Acidiphilium cryptum	Acidiphilium cryptum JF-5 plasmid pACRY03

DNA section

IS Length : 1232 bp

Ends

IR Length : 17/18

IRL : CAGGGGCTACGCATGAAAATTTGGGGCATAATTGACGGCACGGAATCGAG
IRR : CAGGGGTTACGCATGAAAGATGCCGGTGAGCACTTGCTCCATGTAACGGT

Insertion site

Left flank	Direct repeat	Right flank	DR Length
GGTCGTCCTG	GGGCCGTGGG	TCGGTCAGGTAAT	10

DNA sequence

CAGGGGCTACGCATGAAAATTTGGGGCATAATTGACGGCACGGAATCGAGTGTGATTCGGGGAGTCTCCTTGAGATTGGGAGACGTGCATGTCGGTGAGG
CGGCTTGTGGAGGAATTTTCGGCCCTGACAGACCCCCCACTGAGGCGGCAAGGTCGAGCACCGGCTGATTGATATTCTGGTGATTGCGGTGTGCGCGGTG
ATCTCCGGGGCGGAAAGCTGGGAGGATATGGCGCTATATGGCCGCAGCAAGCAGGATTGGCTGGGCACGTTTCTGGCGCTGCCGAACGGCATTCCATCCC
ACGACACCTTCCGACGTGTGTTCATGCTGATCGATACCGGGCGTTTCGAGGCCTGTTTCGAAGCGTGGGCGCGCTCATTCGGGACGACTTTGGACCGGGA
AGTGGTGGCGATTGACGGGAAAGCGAGCCGCGGTTCGTTTGATCGCAGCCGGGACCAGGCGGCGTTTCACGTTGTGAGTGCATGGGCAAGTGATCGGGGA
CTGGTGCTCGGCCAGCGTCAGGTCGGCGACAAATCGAACGAGATCACCGCGATCCCGGAATTGCTGGATGTGCTGGACATCAAGGGCGCCATTGTCACGC
TGGACGCGATGGGGTGCCAGCGAGCCATCGCTGCCAATATCCTTGAGGGGGGCGCCGATTATTTCGTCACTCTGAAAGCCAACCAGGGGAAAAAACACAG
CGCCGTGGCGGAGCTTTGCGCAACCACCTGCTTCAGCCGCTCACCCACTCATCGGCCGGTCCACGACGAATTCGATGATGGTCATGGCCGTCTTGTTCGG
TGCCGGGTATTCGTCTGTCCGGACGCCGTAGCGCTGGAACCGCTGCGCGACTGGCCGGGGTTGAAGAGCGTTCTGGCCGTGGAAACCATCTGCGGTGTCA
ACGGATCCGGCAAGATCGAAGCCGAAATCCGCTACTTCCTGTCCAGCAGCGACGATCAACCCGAAATCCTGGCAAGAGCGATCCGTCAACATTGGCAGAT
CGAGAACAGCCTACACTGGGTACTCGACGTCACCTTCAACGAAGATCACTGCCGGATCCGGGATCGCAACGCCGTCCAGAACTTCTCCCTGCTTCGCAAG
ATCGCAATCAACCTCGTACGCCGCCATCAGCAGGCATCAAAGGCCAGTCTCAAGGGGCGACGCAAAATGGCCGCCTGGGATAACCGTTACATGGAGCAAG
TGCTCACCGGCATCTTTCATGCGTAACCCCTG

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
1038 bp	345 aa	189	1226	+	No

ORF function : Transposase
Chemistry : Unknow

ORF sequence :

VCAVISGAESWEDMALYGRSKQDWLGTFLALPNGIPSHDTFRRVFMLIDTGRFEACFEAWARSFGTTLDREVVAIDGKASRGSFDRSRDQAAFHVVSAWA
SDRGLVLGQRQVGDKSNEITAIPELLDVLDIKGAIVTLDAMGCQRAIAANILEGGADYFVTLKANQGKKHSAVAELCATTCFSRSPTHRPVHDEFDDGHG
RLVRCRVFVCPDAVALEPLRDWPGLKSVLAVETICGVNGSGKIEAEIRYFLSSSDDQPEILARAIRQHWQIENSLHWVLDVTFNEDHCRIRDRNAVQNFS
LLRKIAINLVRRHQQASKASLKGRRKMAAWDNRYMEQVLTGIFHA

Blast result :

Comments

ISAcr3 is 68% aa similar to ISMno1.

References

1] ISfinder annotation (2009)
2] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Magnuson,T. and Richardson,P. (2007) Direct submission GenBank.