ISTha2
- Family ISAs1
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
EU327987 | ND | Thauera sp. | Thauera sp. E7 |
DNA section
IS Length : 1268 bp
Ends
IR Length : 22/27
IRL : CAGGGCAATCGCACCGACTTCGCATAAGCAAATGCAATAACGCTTTTTGC
IRR : CAGGGCAATCGCACCTTCATGTCATAACCCCAAGCAACTCGGCACGAAAT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GTCACAAGCG | CCGCATGAGC | CCCGCCGTTCGC | 10 |
DNA sequence
CAGGGCAATCGCACCGACTTCGCATAAGCAAATGCAATAACGCTTTTTGCTTTCATGACCTTGCGAGACTCCTGTTCACATTGTCATAAGTTGTGTAGTT
TCCTACCTTTTTGGGTATCCCATGAAGGCAGGAAACGTCATGCCGCTGACGCAGGTGTTCGTCTCGATTTCCGACCCGCGCAGCGCGCGGCATGCGCGCC
ACGACCTGACCGAGTTGCTGACGGTGGCGGTGTGCGCGGTGCTCTCGGGTGTCGACGACTTCGTCGACATCGAGTTGTGGGCCGAGGCCAAGATCGACTG
GTTGCGAGGCTTCATGAAGCTTGAGCATGGCATCCCGTCTCACGACACGATCGGACGCGTGTTCGGCCTGATCGCGCCCGACGAGTTCGAGTCCGCGTTC
CGGCGCTGGGTGGGCATGGTGGTGCCGGCGCTGGCCGGGGATACGGTCGTGGCGATCGACGGCAAGACGAGCCGGCGCTCGGGCGGCAAGAGCAAGACTG
ACGCCAGTCCGTTGCACCTGGTGAGCGCGTTTGCGGCCGGCATGGGCGTCGTGCTGGGCCAGACGGCGACCGCCGAGAAGTCGAACGAGATCACCGCGAT
TCCCGAACTGCTTGCCAAGTTGGCGATCGAGGGCTGCGTGGTGACGATCGACGCGATGGGCACCCAGACAAAGATCGCCCGCACGATCCGCGAGCGCGGC
GCGCATTACGTGCTGTGTGTGAAGGAGAACCATCCGAACCTGCACGATTCGATCCTGTTTGCCGACATCGATCCGCGAGGGCCGCTGACGCCGAGCTCGA
CCCATGAGACCACGATCAAGGACCACGGTCGCATCGAGATCCGCCGATGCCGCGCCTACGCCGCGATCGATCGCCTCTACAAGTCCGAGGACTGGCAGGA
TCTGGCAAGCTTCGCGGTGGTCGAGCGCATTCGCACCGTGGGCGATCACACCAGCACCGAGCGCGTCTTCTACATCAGCAGCCTGCCCGCCGACGCCGAG
CGCATCGCTCGAGCCGTACGCAGTCACTGGGAGGTGGAGAATCGGCTTCACTGGTGTCTGGACGTGCAGTTCAACGAGGATCAGTCACGCGTTCGCACCG
GCTACGCTGCCAACAATTTCGCCATCGTTCGCCACATCGTGATGAACCTGCTGCGGCTCAACACGACCCGCAAGGTGAGCATCAAGTCCAAGCGCATGCT
GGCGGCGACGATCGACGAATTTCGTGCCGAGTTGCTTGGGGTTATGACATGAAGGTGCGATTGCCCTG
TCCTACCTTTTTGGGTATCCCATGAAGGCAGGAAACGTCATGCCGCTGACGCAGGTGTTCGTCTCGATTTCCGACCCGCGCAGCGCGCGGCATGCGCGCC
ACGACCTGACCGAGTTGCTGACGGTGGCGGTGTGCGCGGTGCTCTCGGGTGTCGACGACTTCGTCGACATCGAGTTGTGGGCCGAGGCCAAGATCGACTG
GTTGCGAGGCTTCATGAAGCTTGAGCATGGCATCCCGTCTCACGACACGATCGGACGCGTGTTCGGCCTGATCGCGCCCGACGAGTTCGAGTCCGCGTTC
CGGCGCTGGGTGGGCATGGTGGTGCCGGCGCTGGCCGGGGATACGGTCGTGGCGATCGACGGCAAGACGAGCCGGCGCTCGGGCGGCAAGAGCAAGACTG
ACGCCAGTCCGTTGCACCTGGTGAGCGCGTTTGCGGCCGGCATGGGCGTCGTGCTGGGCCAGACGGCGACCGCCGAGAAGTCGAACGAGATCACCGCGAT
TCCCGAACTGCTTGCCAAGTTGGCGATCGAGGGCTGCGTGGTGACGATCGACGCGATGGGCACCCAGACAAAGATCGCCCGCACGATCCGCGAGCGCGGC
GCGCATTACGTGCTGTGTGTGAAGGAGAACCATCCGAACCTGCACGATTCGATCCTGTTTGCCGACATCGATCCGCGAGGGCCGCTGACGCCGAGCTCGA
CCCATGAGACCACGATCAAGGACCACGGTCGCATCGAGATCCGCCGATGCCGCGCCTACGCCGCGATCGATCGCCTCTACAAGTCCGAGGACTGGCAGGA
TCTGGCAAGCTTCGCGGTGGTCGAGCGCATTCGCACCGTGGGCGATCACACCAGCACCGAGCGCGTCTTCTACATCAGCAGCCTGCCCGCCGACGCCGAG
CGCATCGCTCGAGCCGTACGCAGTCACTGGGAGGTGGAGAATCGGCTTCACTGGTGTCTGGACGTGCAGTTCAACGAGGATCAGTCACGCGTTCGCACCG
GCTACGCTGCCAACAATTTCGCCATCGTTCGCCACATCGTGATGAACCTGCTGCGGCTCAACACGACCCGCAAGGTGAGCATCAAGTCCAAGCGCATGCT
GGCGGCGACGATCGACGAATTTCGTGCCGAGTTGCTTGGGGTTATGACATGAAGGTGCGATTGCCCTG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1131 bp | 376 aa | 122 | 1252 | + | No |
Chemistry : Unknow
ORF sequence :
MKAGNVMPLTQVFVSISDPRSARHARHDLTELLTVAVCAVLSGVDDFVDIELWAEAKIDWLRGFMKLEHGIPSHDTIGRVFGLIAPDEFESAFRRWVGMV
VPALAGDTVVAIDGKTSRRSGGKSKTDASPLHLVSAFAAGMGVVLGQTATAEKSNEITAIPELLAKLAIEGCVVTIDAMGTQTKIARTIRERGAHYVLCV
KENHPNLHDSILFADIDPRGPLTPSSTHETTIKDHGRIEIRRCRAYAAIDRLYKSEDWQDLASFAVVERIRTVGDHTSTERVFYISSLPADAERIARAVR
SHWEVENRLHWCLDVQFNEDQSRVRTGYAANNFAIVRHIVMNLLRLNTTRKVSIKSKRMLAATIDEFRAELLGVMT
VPALAGDTVVAIDGKTSRRSGGKSKTDASPLHLVSAFAAGMGVVLGQTATAEKSNEITAIPELLAKLAIEGCVVTIDAMGTQTKIARTIRERGAHYVLCV
KENHPNLHDSILFADIDPRGPLTPSSTHETTIKDHGRIEIRRCRAYAAIDRLYKSEDWQDLASFAVVERIRTVGDHTSTERVFYISSLPADAERIARAVR
SHWEVENRLHWCLDVQFNEDQSRVRTGYAANNFAIVRHIVMNLLRLNTTRKVSIKSKRMLAATIDEFRAELLGVMT
Blast result :
Comments
ISTha2 is 81% aa similar to ISAzo8.
References
1] ISfinder annotation
2] Gillings,M., Boucher,Y., Labbate,M., Holmes,A., Krishnan,S., Holley,M. and Stokes,H. (2008) J. Bacteriol. 190 (14), 5095-5100
2] Gillings,M., Boucher,Y., Labbate,M., Holmes,A., Krishnan,S., Holley,M. and Stokes,H. (2008) J. Bacteriol. 190 (14), 5095-5100