ISAnsp2

  • Family IS481
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NC_011145 ND Anaeromyxobacter sp.
Anaeromyxobacter sp. K
DNA section
IS Length : 1298 bp

Ends


IR Length : 15/17

IRL : GTCAGGGCATCGCTGACAGGTTGAGTCGGTGGGTGCCCTGGAAAGAGCTC
IRR : GTCAAGACATCGCTGACGGCCCAGGTGTGAGTCGACGAGACCTCAGGCGC

Insertion site


Left flankDirect repeatRight flankDR Length
ACATCGCTGACACCTTTTGCTGGTTCCCCCGACCTCAAGC0
ACATCGCTGACACCTTTTGCTGGTTCCCCCGAACGCCATC0

DNA sequence

GTCAGGGCATCGCTGACAGGTTGAGTCGGTGGGTGCCCTGGAAAGAGCTCCGCCCAATGAGCCAGAAGCTCGAGTTCGTCGAGAAGGCGATCGTCCCCGG
TGCCAACGTGTCAGCCCTCTGCCGCGACTTCGGCATCTCGCGGCAGACGGCGCACAAGTGGCTCCGACGGTACCGCGACCAGGGCTACCTCGGGCTCGTC
GAGAAGAGCCGACGACCTGCCTCGTCGCCACTCGCGACGGCCGAGGACGTGGTCGTCAGCATCATCGAGCTCCGCAGCAAACACGCGAGCTGGGGGCCGC
AGAAGATTGCGGGCGTGCTTGCGCGTCGCCTGGGGCCGGAGGCCCCAAGTCCCACCACTGTCGCGCGAGTCCTTCGCCGCCTCGGCAAGGTGAAGCGCCG
GCGCCCAGCGGCACGAATCTGGTCAGTCGATGGCCGGCCCCGGATCGAGGTGAAGGCCTCTAACGACCTGTGGACGATCGACTTCAAGGGCTGGTGGCGC
GCGCTCAACGGCGACAAGTGCGAGCCGCTGACGGTGCGTGACGCGTTCAGCCGAAGAGTACTCGCCGTAGCCCTCGTCCCCGCGACGACGGCCGCTCACG
TGAGGCGCGTCCTCGAGCTGCTATTCCGCAAACACGGCCTCCCCAGCGCCATCCAGAGCGACAACGGTAGCCCTTTCATCTGCTCTCGATCACGCGGCGG
GTTGACAGTGCTCTCCGCGTGGCTCGTCTCGCTCGGCATCCGCATCGTCCGGTCGCGCCCCGGTCACCCGCAGGACAACGGTGGCCACGAGCGCATGCAC
CGCGACCTCAGCGAGCTCCAGCTTTCGCCTGCTCGCAGCCGCCGCGCCCAGCAGCGCCAGTGCGATCGCTGGATGCTCGACTTCAACCACGTGCGGCCGC
ACGACGCGCTCGGCGGAAAGACGCCGGCGGAGCTCTACCGGAACTCGACGCGTCGCTCGCTGTCACCGCTGCTGCCAACCTATCCGCCCGAGTGGCTGAC
ACGTCGCGCGAACAAGGCCGGCTACGTCCGAATCAACGGCGACCAGGTGTTTGTTGCGACGGCTCTCGCCCGCCAGCTCATCGGACTACGCCAGGAGTCC
GAGTTGCGGTGGTCCGCTCGGTTCTTCGACGTCGACCTAGGCATGATCGAGATCCTGCCGATCGATCACGCGTACCTCGGTGGAACTGTCATGGAGACCG
TCACCACCGTTCGTCCCTCGGAGCGTGCGCGAGAACGCATTCCTGTAAGCGCCTGAGGTCTCGTCGACTCACACCTGGGCCGTCAGCGATGTCTTGAC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1200 bp399 aa571256+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSQKLEFVEKAIVPGANVSALCRDFGISRQTAHKWLRRYRDQGYLGLVEKSRRPASSPLATAEDVVVSIIELRSKHASWGPQKIAGVLARRLGPEAPSPT
TVARVLRRLGKVKRRRPAARIWSVDGRPRIEVKASNDLWTIDFKGWWRALNGDKCEPLTVRDAFSRRVLAVALVPATTAAHVRRVLELLFRKHGLPSAIQ
SDNGSPFICSRSRGGLTVLSAWLVSLGIRIVRSRPGHPQDNGGHERMHRDLSELQLSPARSRRAQQRQCDRWMLDFNHVRPHDALGGKTPAELYRNSTRR
SLSPLLPTYPPEWLTRRANKAGYVRINGDQVFVATALARQLIGLRQESELRWSARFFDVDLGMIEILPIDHAYLGGTVMETVTTVRPSERARERIPVSA

 

Blast result :
Comments
ISAnsp2 is 43% aa similar to ISHne2.
References
1] Miriam Land (2008) Direct submission.