ISAnsp1

  • Family IS1182
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NC_011145 ND Anaeromyxobacter sp.
Anaeromyxobacter sp. K
DNA section
IS Length : 1520 bp

Ends


IR Length : 14/17

IRL : GAGAGCGTGAAGAAATCGGCCGGCGCCCATGGACCTAGGACGGCCGGCCG
IRR : GGACCGTGAAGTAATCCGTTCGCGTCGAGCGTGGCGGCGCCGGAGGCGCC

Insertion site


Left flankDirect repeatRight flankDR Length
GATCAACCCTg/cTGAGAGCACGTGA4
TGCTGGAGCGCTGAGGGCTCAGCC4
CGTACCGGCGCTGAGAGCACGTGA4
TCGCGGAGGCCTGAGAGCACGTGA4
CGGCGGCGCCCTGAGCGCACGCAC4

DNA sequence

GAGAGCGTGAAGAAATCGGCCGGCGCCCATGGACCTAGGACGGCCGGCCGTGATCTTCTCGGGGCGTGAGCGAGCACGACGCGCCGCGGGTGGTGAGGCC
GGTCCGGAACCAGCTGTCGTTGCAGCCGACCGACCTTGAGGCATTGGTCGCGGACGAGCATCCGGTTCGCGCCATCTGGGGGCTCGTTGAGCGGCTAGAT
CTCTCGGCGTTCTACGACGAGATCGCGTCGAGGGGCAGCAACGCGGGGCGACCGGCGACCGACCCGGCGGTGCTGCTGGCGCTGTGGCTGTTCGCGAACT
CCGAGGGCGTGGGGAGCGCCCGGCTGCTGGAGCGGCTTTGCGAGCGGGATGCGCCGTACCGCTGGATCTGCGGCGGAGTGCCGGTGAACCACCACACGCT
CGCCGACTTCCGCGTGATTCACGGCAAGAAGCTCGACCGGCTCATGACGCAGGTGCTCGCCGCGCTGATGAAGGAAGGCGTAGTGCAGCTGAAGCGCGTG
GCGCAGGACGGAATGAAGGTCCGCGCGAGCGCCGGGGCGGCGAGCTTCCGGCGTCGGCAATCGCTCGAGCGGTGCCGCAACGAGGCCGAGGAGCAGGTCC
GCAAGCTCCGCCGCGAGATCAGCGAAGATCCGTCCGCATCGACGAAGCGAGTGACAGCCGCGAAGGAGCGCGCGGCGAAGGCGCGGCTCGACGCCATCGA
CGCTGCGCTTGCGGAGATTGGTGAGGTCGAGGAGGAGCGTGCCGAGCGCGACGAGAAGAAGCCGTCAGACGCGAGACGCCGCGGTGAGATCCGCGTGAGC
ACGACGGACGCCGAGAGCCGCGTGATGAAGATGGCCGACGGCGGCTTTCGCCCCGCGTACAACGTGCAGCTCGCGACGGACGAGAGCGGCTTCATCGTCG
GCGCGGACGTGACGAACAACGGCACCGACCAGCCACACGTCGTGCCGATGCTCGACGAGATCCAGCGCCGCACCGGCGAGGCGCCACGCGAGTACCTGGT
CGACGGCGGCTTCGTGACCCTCGACAACATCGAGGCGATCGCGGAGCGCGGCGCGACCGCCTACGCGCCGCTGCCGAAGTCGAAGAGCAAGGACGTCGAC
CCTCACGCTCCGAAGCGGAACGACCCGCCCGCGGTCGGTGCGTGGCGCATACGGATGGGCACCGAGGATGCGAAGCGCGTCTACATCCAGCGCGGCGTGC
TCGCTGAGCGGACGAACGCGGATCTCCGGGCGCACCGAGGTCTCGACCGGCTGAACGTCCGTGGGCTCGTGAAGGTGAAAACCGTGGTGCTGCTGGCCGC
CATCAGCTTCAACGTGATGCGGCTCATCGCGAGCGGGCTCTCGGCCTGACCGGCGTCTCCGGGCGCCCACTTCGGGCGCCCGAACCAGGGTCCTGACCGG
GCAGCATCGGACTTCGGCCGGCCGAACCGCCGCCGCTGCCCCCCCGGACTCGGGCGCGTCTCGACTCCGCGGCGCCTCCGGCGCCGCCACGCTCGACGCG
AACGGATTACTTCACGGTCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1284 bp427 aa661349+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

VSEHDAPRVVRPVRNQLSLQPTDLEALVADEHPVRAIWGLVERLDLSAFYDEIASRGSNAGRPATDPAVLLALWLFANSEGVGSARLLERLCERDAPYRW
ICGGVPVNHHTLADFRVIHGKKLDRLMTQVLAALMKEGVVQLKRVAQDGMKVRASAGAASFRRRQSLERCRNEAEEQVRKLRREISEDPSASTKRVTAAK
ERAAKARLDAIDAALAEIGEVEEERAERDEKKPSDARRRGEIRVSTTDAESRVMKMADGGFRPAYNVQLATDESGFIVGADVTNNGTDQPHVVPMLDEIQ
RRTGEAPREYLVDGGFVTLDNIEAIAERGATAYAPLPKSKSKDVDPHAPKRNDPPAVGAWRIRMGTEDAKRVYIQRGVLAERTNADLRAHRGLDRLNVRG
LVKVKTVVLLAAISFNVMRLIASGLSA

 

Blast result :
Comments
ISAnsp1 is 46% aa similar to ISKpn6.
File updated: August 26 2010.
References
1] Miriam Land (2008) Direct submission.