ISAli18

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Azospirillum lipoferum
Azospirillum lipoferum plasmid p6AZO 553
DNA section
IS Length : 1752 bp

Ends


IR Length : 21/25

IRL : GGGTCCATCCGCATTCCCGGTGCAGGCCGGATGCAAATGGGAGGCGGAAT
IRR : GCACCCATCCGCATTCTCGGTGCAGAGGGCCAGCTTGAACGATACTGTTC

Insertion site


Left flankDirect repeatRight flankDR Length
GTCAGGCGACACGTCAAACTGCTCCGGCGCCCCCTCGGGCTTA0

DNA sequence

GGGTCCATCCGCATTCCCGGTGCAGGCCGGATGCAAATGGGAGGCGGAATGAGCACATAAAGGGAACCATTTCCTGCATGAGCACCCGCTTCCTTGTCCA
AATCGCTGCTTTCCTTGCTGCCGGCCGGGCTTGTCGTTGATCAGGTCACGGTCGACGTCGATCGTGTCGTGGTGGCGGCCCATGTACGTGCCGCTACGGC
CTCCTGCCCGTTGTGTCGCCGACCATCGCGTCGCGTCCATAGTCGTTACAATCGCCACCTAGGCGATCTGCCCTGGCAGGGCCGTATGGGTGAACTGCGT
CTGCAAGTCCGCCGGTTCCGGTGCCCGGCCGCGGACTGCCCGCGCCGTGTCTTCACCGAATGCCTGCCCACGGTCGCGGCGCCGCGGGTCCGGCGCACCC
GCCGGCTTGCCGAGGCGCAGCGCACCATCGCCTTGAGCGCGGGGGGCGATCCCGGCGCCCGGCTGGCCACCCGCCTTGCGATGCCGGTCAGTGGCGACAC
GCTGCTGCGCCTGATCCGGGCGGAGCCGATGGTGCCGATTCCGACGCCGCGCGTCATCGGCATCGATGACTGGGCGTGGCGCCGCGGCAAACGCTACGGC
ACCATCGTCGTCGACCTCGAACGCGGCCGCCCGATCGACCTGCTGCCCGACCGCCATGCCGACACCGTCGCCGCGTGGCTGAAGGCGCATCCCGGCGTCG
AGATCGTTGCCCGCGATCGTGCGGGCGCCTATGCCAACGGCATCCGCCGAGGCGTACCGACCGCCGTTCAGGTCGCCGACCGGTGGCACCTCCTACACAA
TCTCACCGACGCGCTGCGTGAGGTTCTCACCGGTCATCATCGGGATCTGCGGGCGGCGGCCAATCTGGCCGTCGCTCCCGTCGACGAAACCGGACAAGAG
GTGCACGCGCCGCAGCCCGATAAGAGTGGCAAACCATCGACCCGTCGCGAGCAGAGGAGCGTCGTCATCCAGGCCGCCCGCCAGGCCCGTTTCGAGGAGG
TCGTCGCGCTGGACACTCGCGGCTGGTCGCAAACCCGCATCGCCCAGGCGCTCGGCCTCGACCGCAAGACGGTGCGGGTGTGGCTGCGGTCCGGGCAGCC
ACCACCTTGGCGCCAACCGGCCAAGGGCAGCCAACTCGATCCCTTCCGCGACCATCTGCGACGGCGCTGGGACGAAGGCTGCCACAACGCCGCACGGCTG
TGGCGGGAGATCAAGGCCCTCGGCTTCACCGGTCAGCGGACCGCGGTCCGGGAATGGGCACGGCCTCTGCGACAGGTCGTCCCAGGCATAACCTCCACAG
CCTCGGCCTCATGGCGGGTGCCGTCGCGGCGACGAGCGGCATGGCTGGTGGTCGCCGACGAGACCGAGATCGACGCGACCGAGCAGGCCTTCGTCACCGC
CCTGCTGTCCCGTTCAGCGAAATTGGCCCAGATCGTCGCGTTGGCTCGGGCCTTCCGAACAATGGTCCGCGAACAACGGGCCGGAGAGCTGGATGGTTGG
CTGCTGGCGGCCGACGGCACAGCCTTGGCGGGATTCGCCGGCGGCCTGAAGCGTGATCTGGCGGCGGTGCGCGCGGCCTTGTCGCTGCCGTGGAGCACCG
GGCCGGTGGAGGGCCAGATCAGCAGGCTGAAGACGATCAAGCGCACGATGAACGGCCGCGGTGGCTTCGACTTGCTGCGCCATCGCGTCCTCGAAGCCGC
CTGAACAGTATCGTTCAAGCTGGCCCTCTGCACCGAGAATGCGGATGGGTGC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1419 bp472 aa2861704+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MGELRLQVRRFRCPAADCPRRVFTECLPTVAAPRVRRTRRLAEAQRTIALSAGGDPGARLATRLAMPVSGDTLLRLIRAEPMVPIPTPRVIGIDDWAWRR
GKRYGTIVVDLERGRPIDLLPDRHADTVAAWLKAHPGVEIVARDRAGAYANGIRRGVPTAVQVADRWHLLHNLTDALREVLTGHHRDLRAAANLAVAPVD
ETGQEVHAPQPDKSGKPSTRREQRSVVIQAARQARFEEVVALDTRGWSQTRIAQALGLDRKTVRVWLRSGQPPPWRQPAKGSQLDPFRDHLRRRWDEGCH
NAARLWREIKALGFTGQRTAVREWARPLRQVVPGITSTASASWRVPSRRRAAWLVVADETEIDATEQAFVTALLSRSAKLAQIVALARAFRTMVREQRAG
ELDGWLLAADGTALAGFAGGLKRDLAAVRAALSLPWSTGPVEGQISRLKTIKRTMNGRGGFDLLRHRVLEAA

 

Blast result :
Comments
ISAli18 is 87% aa similar to ISAli11.
References
1] ISfinder annotation (2008)